Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 9.7e-289 996.1 505 100.0
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 1.1e-276 956.1 502 96.0
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 8.9e-218 760.4 517 78.7
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 7.6e-201 704.1 502 72.5
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 9.9e-201 703.7 497 73.4
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 9.9e-201 703.7 503 72.8
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 9.9e-201 703.7 514 71.8
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 2.9e-200 702.2 534 70.6
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 1.1e-199 700.3 469 77.0
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 2.4e-199 699.1 468 76.3
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 4.2e-199 698.4 502 72.5
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 4.2e-199 698.4 520 70.6
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 5.4e-199 698.0 501 72.9
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 5.4e-199 698.0 503 72.6
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 5.4e-199 698.0 508 72.6
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 5.4e-199 698.0 513 71.5
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 7.1e-199 697.6 511 71.6
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 1.6e-198 696.4 532 69.5
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 2.1e-198 696.0 464 76.7
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 4.6e-198 694.9 504 72.6
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 4.6e-198 694.9 508 71.3
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 3.0e-197 692.2 503 70.8
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 6.6e-197 691.0 511 71.8
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 3.3e-196 688.7 440 79.5
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 3.3e-196 688.7 495 72.3
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 4.3e-196 688.3 530 70.2
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 5.6e-196 688.0 505 70.1
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 5.6e-196 688.0 439 79.3
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 1.3e-195 686.8 512 71.3
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 2.1e-195 686.0 507 69.8
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 2.1e-195 686.0 509 71.9
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 1.8e-194 682.9 514 70.6
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 1.8e-194 682.9 439 78.1
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 1.8e-194 682.9 509 69.4
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 4.0e-194 681.8 513 70.2
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 4.0e-194 681.8 476 71.6
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 5.3e-194 681.4 512 70.5
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 6.9e-194 681.0 511 70.5
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 3.4e-193 678.7 505 70.3
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 1.3e-192 676.8 509 69.9
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 1.7e-192 676.4 502 69.3
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 6.4e-192 674.5 515 69.1
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 6.4e-192 674.5 505 70.1
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.4e-192 674.1 512 69.1
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 1.4e-191 673.3 506 70.6
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 4.2e-191 671.8 458 72.9
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 7.1e-191 671.0 517 69.6
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 2.7e-190 669.1 507 68.8
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 3.5e-190 668.7 512 68.2
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 1.3e-189 666.8 512 68.6
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 1.8e-189 666.4 469 72.1
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 3.0e-189 665.6 468 71.4
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 3.9e-189 665.2 503 70.4
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 5.1e-189 664.8 478 70.7
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 6.7e-189 664.5 507 67.9
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 8.7e-189 664.1 454 73.1
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 1.1e-188 663.7 457 74.0
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 2.5e-188 662.5 513 67.3
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.3e-188 661.8 506 68.2
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 5.6e-188 661.4 467 70.9
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 1.3e-187 660.2 498 68.1
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.4e-186 656.8 460 72.4
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.8e-186 656.4 512 68.0
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 9.0e-186 654.1 468 69.9
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 1.5e-185 653.3 468 69.7
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 1.5e-185 653.3 468 70.3
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 3.4e-185 652.1 503 66.8
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 3.4e-185 652.1 503 66.8
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 5.8e-185 651.4 439 73.8
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 1.0e-184 650.6 468 69.9
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 1.0e-184 650.6 468 69.7
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 1.0e-184 650.6 468 69.7
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.3e-184 650.2 459 71.7
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 1.3e-184 650.2 459 71.7
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 2.2e-184 649.4 581 60.9
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 1.4e-183 646.7 520 64.8
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.4e-183 646.7 460 71.3
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 1.9e-183 646.4 468 68.6
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 1.9e-183 646.4 444 73.2
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 2.5e-183 646.0 517 65.4
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 7.1e-183 644.4 444 72.1
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 6.0e-182 641.3 453 74.0
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 7.9e-182 641.0 506 66.0
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 1.0e-181 640.6 487 68.4
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 3.9e-181 638.6 446 70.6
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 1.1e-180 637.1 524 64.7
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 1.5e-180 636.7 487 68.2
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 9.6e-180 634.0 460 69.3
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 2.8e-179 632.5 441 72.3
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 6.3e-179 631.3 441 72.8
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 6.3e-179 631.3 487 67.4
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.4e-178 630.2 526 64.6
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 1.8e-178 629.8 441 70.1
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 2.4e-178 629.4 505 65.7
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 3.1e-178 629.0 451 71.0
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 9.0e-178 627.5 516 64.1
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 3.4e-177 625.5 458 69.7
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.0e-176 624.0 444 71.4
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.9e-175 619.8 443 70.9
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 5.5e-175 618.2 455 69.2
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 1.1e-172 610.5 476 65.5
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 9.7e-172 607.4 516 63.0
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 1.2e-166 590.5 465 65.8
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 6.7e-165 584.7 437 66.6
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 2.6e-161 572.8 441 64.6
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 1.0e-160 570.9 443 64.1
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 1.7e-160 570.1 447 62.4
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 6.5e-160 568.2 455 65.9
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 1.9e-159 566.6 499 60.9
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 1.4e-149 533.9 499 59.3
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 8.2e-147 524.6 315 82.2
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 1.2e-145 520.8 442 57.5
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 2.7e-145 519.6 382 67.3
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 7.2e-143 511.5 503 56.5
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 8.3e-139 498.0 459 54.9
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 2.5e-135 486.5 507 56.0
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 1.2e-134 484.2 518 48.5
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 4.9e-131 472.2 480 51.5
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 1.2e-124 451.1 421 58.4
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 2.6e-116 423.3 467 53.7
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.1e-103 381.3 235 80.0
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 8.4e-83 312.0 439 39.2
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 1.1e-82 311.6 421 44.7
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 4.5e-76 289.7 233 63.1
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 2.7e-73 280.4 260 59.2
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 1.3e-72 278.1 447 43.6
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 4.8e-70 269.6 244 62.3
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 2.3e-64 250.8 346 47.1
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 3.3e-63 246.9 174 70.7
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.6e-62 244.6 454 33.3
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 8.5e-59 232.3 317 39.1
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 1.1e-50 205.3 417 36.7
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.4e-48 198.4 187 57.2
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 3.3e-39 167.2 133 66.9
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.8e-37 161.4 116 70.7
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.0e-35 155.6 96 79.2
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 4.4e-23 113.6 69 75.4
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 9.8e-23 112.5 78 67.9
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 1.3e-22 112.1 129 51.9
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.7e-22 111.7 135 53.3
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 7.7e-20 102.8 57 82.5
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 1.9e-18 98.2 70 65.7
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 7.2e-18 96.3 85 63.5
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 2.2e-14 84.7 50 80.0
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 2.2e-14 84.7 50 80.0
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 1.6e-12 78.6 62 64.5
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 8.6e-11 72.8 73 56.2


User provided reference genes

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