Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 1.3e-171 606.3 314 100.0
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 4.1e-136 488.4 313 82.1
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 1.0e-99 367.5 312 66.3
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 1.3e-97 360.5 317 64.0
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 1.7e-97 360.1 312 64.1
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 3.2e-96 355.9 315 62.2
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 7.0e-96 354.8 274 71.2
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 1.2e-95 354.0 324 64.2
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 2.0e-95 353.2 294 65.6
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 5.9e-95 351.7 309 63.4
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 7.8e-95 351.3 324 64.2
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 5.0e-94 348.6 299 64.9
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 2.5e-93 346.3 316 62.3
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 4.3e-93 345.5 314 61.1
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 5.6e-93 345.1 310 62.9
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 5.6e-93 345.1 319 63.9
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 7.3e-93 344.7 291 65.6
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 1.2e-92 344.0 326 59.5
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 2.1e-92 343.2 299 65.6
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 3.6e-92 342.4 269 69.9
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 4.7e-92 342.0 282 64.5
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 8.0e-92 341.3 315 61.0
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 8.0e-92 341.3 267 68.2
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 1.0e-91 340.9 324 60.8
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 4.0e-91 339.0 254 69.3
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 5.2e-91 338.6 276 65.6
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 6.8e-91 338.2 289 65.7
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 6.8e-91 338.2 310 62.6
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 1.2e-90 337.4 296 64.5
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 2.0e-90 336.7 294 64.3
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 2.6e-90 336.3 295 63.4
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 9.8e-90 334.3 250 70.0
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 9.8e-90 334.3 268 65.7
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 9.8e-90 334.3 305 60.3
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 1.3e-89 334.0 282 63.5
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.7e-89 333.6 267 67.0
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 2.2e-89 333.2 293 63.1
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 2.9e-89 332.8 317 60.6
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 3.7e-89 332.4 279 63.1
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 1.1e-88 330.9 281 65.5
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 1.4e-88 330.5 278 66.9
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 1.4e-88 330.5 301 61.1
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 1.9e-88 330.1 253 71.1
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.9e-88 330.1 305 61.6
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 1.9e-88 330.1 296 61.8
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 3.2e-88 329.3 256 66.8
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 3.2e-88 329.3 293 64.2
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 9.2e-88 327.8 271 67.5
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 2.0e-87 326.6 312 59.3
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 3.5e-87 325.9 263 64.6
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 4.6e-87 325.5 307 59.3
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 7.8e-87 324.7 315 56.8
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 1.3e-86 323.9 245 68.2
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 1.3e-86 323.9 315 58.7
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 1.3e-86 323.9 278 65.5
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 1.7e-86 323.6 265 65.3
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 1.7e-86 323.6 317 59.3
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 1.7e-86 323.6 262 66.4
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 2.3e-86 323.2 268 63.8
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 3.0e-86 322.8 279 65.6
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 3.0e-86 322.8 270 66.7
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 3.9e-86 322.4 263 66.5
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 3.9e-86 322.4 309 59.9
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 5.0e-86 322.0 297 59.9
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 1.5e-85 320.5 309 58.9
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 1.9e-85 320.1 315 57.1
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 1.9e-85 320.1 265 65.7
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.5e-85 319.7 230 71.7
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 2.5e-85 319.7 265 65.7
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 3.3e-85 319.3 253 70.0
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 4.3e-85 318.9 248 69.0
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 5.6e-85 318.5 257 64.2
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 3.6e-84 315.8 230 73.5
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 6.2e-84 315.1 261 64.0
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 8.1e-84 314.7 295 62.4
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 8.1e-84 314.7 252 69.0
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 1.1e-83 314.3 283 61.1
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.8e-83 313.5 294 60.2
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 3.1e-83 312.8 298 58.1
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 5.2e-83 312.0 320 54.1
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 1.5e-82 310.5 316 55.7
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 2.0e-82 310.1 282 59.9
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 5.8e-82 308.5 282 59.6
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 2.9e-81 306.2 296 59.8
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 3.7e-81 305.8 229 69.4
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 1.4e-80 303.9 269 63.2
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 5.4e-80 302.0 266 59.0
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 6.0e-79 298.5 342 51.5
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 3.9e-78 295.8 267 59.9
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 5.6e-77 292.0 226 67.3
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 3.6e-76 289.3 233 63.5
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 3.6e-76 289.3 247 64.4
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 6.2e-76 288.5 263 60.1
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 1.8e-75 287.0 223 65.5
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 4.0e-75 285.8 277 60.3
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 4.4e-74 282.3 239 66.5
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 6.4e-73 278.5 249 58.6
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 5.4e-72 275.4 187 77.0
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.6e-68 263.8 291 54.6
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 2.1e-68 263.5 186 73.7
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 3.4e-66 256.1 173 75.7
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 9.9e-66 254.6 264 55.3
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 1.9e-64 250.4 166 75.3
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 2.5e-61 240.0 240 52.9
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 4.3e-61 239.2 200 64.5
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 5.3e-59 232.3 266 55.3
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 6.9e-59 231.9 315 48.9
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 4.3e-53 212.6 234 48.3
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 3.6e-52 209.5 203 54.7
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 4.9e-49 199.1 185 58.9
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 3.2e-48 196.4 242 51.2
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 2.1e-47 193.7 152 71.7
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 3.0e-46 189.9 173 54.3
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 1.1e-43 181.4 239 43.9
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 7.9e-31 138.7 126 53.2
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 8.7e-30 135.2 108 59.3
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 4.3e-29 132.9 103 69.9
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 2.2e-28 130.6 184 47.8
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 2.6e-26 123.6 120 57.5
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 2.6e-21 107.1 209 35.9
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 8.2e-20 102.1 68 66.2
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 2.0e-18 97.4 101 53.5
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 3.2e-16 90.1 99 50.5
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 3.0e-14 83.6 71 64.8
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 4.5e-10 69.7 104 45.2
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 1.5e-08 64.7 65 60.0
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 1.0e-06 58.5 59 52.5
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 1.4e-06 58.2 55 63.6
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 6.7e-06 55.8 35 62.9


User provided reference genes

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