Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0114600 Salix brachista HOM05D003704 ORTHO05D017707 1.0e-93 346.7 170 100.0
Sabra17G0036200 Salix brachista HOM05D003704 ORTHO05D017707 6.7e-93 344.0 170 99.4
Sabra16G0231600 Salix brachista HOM05D001895 ORTHO05D002082 5.5e-79 297.7 146 97.9
Sabra16G0112400 Salix brachista HOM05D003704 ORTHO05D017707 1.5e-60 236.5 146 81.5
Sabra18G0029400 Salix brachista HOM05D000117 ORTHO05D017707 4.4e-60 235.0 146 80.8
Sabra16G0122800 Salix brachista HOM05D003704 ORTHO05D017707 6.0e-41 171.4 84 100.0
Potri.003G201200 Populus trichocarpa HOM05D003704 ORTHO05D005892 4.4e-20 102.1 61 82.0
Sabra03G0148800 Salix brachista HOM05D003704 ORTHO05D005892 4.4e-20 102.1 61 82.0
Manes.04G164800 Manihot esculenta HOM05D003704 ORTHO05D005892 9.9e-20 100.9 61 80.3
QL04p013824 Quercus lobata HOM05D003704 ORTHO05D005892 4.9e-19 98.6 61 77.0
QL07p028220 Quercus lobata HOM05D003704 ORTHO05D005892 4.9e-19 98.6 61 77.0
CANSAT64G2305 Cannabis sativa HOM05D003704 ORTHO05D005892 6.4e-19 98.2 61 78.7
CiPaw.13G011100 Carya illinoinensis HOM05D003704 ORTHO05D005892 6.4e-19 98.2 61 77.0
Eucgr.G03254 Eucalyptus grandis HOM05D003704 ORTHO05D005892 6.4e-19 98.2 61 77.0
Gohir.A08G225100 Gossypium hirsutum HOM05D003704 ORTHO05D005892 6.4e-19 98.2 61 77.0
MD02G1293400 Malus domestica HOM05D003704 ORTHO05D005892 6.4e-19 98.2 61 78.7
TWI15G0657 Tripterygium wilfordii HOM05D003704 ORTHO05D005892 6.4e-19 98.2 61 78.7
Cfa010865 Carpinus fangiana HOM05D003704 ORTHO05D005892 8.4e-19 97.8 59 79.7
Haze_03082 Corylus avellana HOM05D003704 ORTHO05D005892 8.4e-19 97.8 59 79.7
Duzib128G1318 Durio zibethinus HOM05D003704 ORTHO05D005892 8.4e-19 97.8 61 77.0
Gohir.D08G245550 Gossypium hirsutum HOM05D003704 ORTHO05D005892 8.4e-19 97.8 61 77.0
MD07G1033300 Malus domestica HOM05D003704 ORTHO05D005892 1.4e-18 97.1 61 77.0
arahy.Tifrunner.gnm1.ann1.75MG08 Arachis hypogaea HOM05D003704 ORTHO05D005892 1.9e-18 96.7 61 78.7
arahy.Tifrunner.gnm1.ann1.RZB3JM Arachis hypogaea HOM05D003704 ORTHO05D005892 1.9e-18 96.7 61 78.7
Ciclev10030496m.g Citrus clementina HOM05D003704 ORTHO05D005892 1.9e-18 96.7 61 73.8
Glyma.09G285300 Glycine max HOM05D003704 ORTHO05D005892 1.9e-18 96.7 61 78.7
Glyma.20G000700 Glycine max HOM05D003704 ORTHO05D005892 1.9e-18 96.7 61 78.7
Gorai.004G262000 Gossypium raimondii HOM05D003704 ORTHO05D005892 1.9e-18 96.7 61 75.4
Lj2g0008107 Lotus japonicus HOM05D003704 ORTHO05D005892 1.9e-18 96.7 61 78.7
Medtr1g038815 Medicago truncatula HOM05D003704 ORTHO05D005892 1.9e-18 96.7 61 78.7
PGR142G1874 Punica granatum HOM05D003704 ORTHO05D005892 1.9e-18 96.7 61 77.0
Prupe.2G030100 Prunus persica HOM05D003704 ORTHO05D005892 2.4e-18 96.3 61 78.7
Ca_12375_v3 Cicer arietinum L. HOM05D003704 ORTHO05D005892 3.2e-18 95.9 61 78.7
Phvul.003G001700 Phaseolus vulgaris HOM05D003704 ORTHO05D005892 3.2e-18 95.9 59 79.7
TPR.G35533 Trifolium pratense HOM05D003704 ORTHO05D005892 3.2e-18 95.9 61 78.7
VMungo0251G0473 Vigna mungo HOM05D003704 ORTHO05D005892 3.2e-18 95.9 59 79.7
ClCG05G020780 Citrullus lanatus HOM05D003704 ORTHO05D005892 4.2e-18 95.5 61 75.4
QL01p034778 Quercus lobata HOM05D003704 ORTHO05D005892 5.4e-18 95.1 61 73.8
Solyc01g068480.4 Solanum lycopersicum HOM05D003704 ORTHO05D005892 7.1e-18 94.7 59 78.0
Sopen01g030440 Solanum pennellii HOM05D003704 ORTHO05D005892 7.1e-18 94.7 59 78.0
Thecc.05G198600 Theobroma cacao HOM05D003704 ORTHO05D005892 7.1e-18 94.7 61 75.4
Lalb_Chr17g0337761 Lupinus albus HOM05D003704 ORTHO05D005892 9.3e-18 94.4 59 78.0
Nitab4.5_0000316g0110 Nicotiana tabacum HOM05D003704 ORTHO05D005892 9.3e-18 94.4 59 76.3
Sed0025295 Sechium edule HOM05D003704 ORTHO05D005892 9.3e-18 94.4 61 75.4
CAN.G1571.5 Capsicum annuum HOM05D003704 ORTHO05D005892 1.2e-17 94.0 59 76.3
MELO3C012449.2 Cucumis melo HOM05D003704 ORTHO05D005892 2.1e-17 93.2 108 53.7
CsaV3_5G036520 Cucumis sativus L. HOM05D003704 ORTHO05D005892 2.1e-17 93.2 108 53.7
FAN01G0955 Fragaria x ananassa HOM05D003704 ORTHO05D005892 2.1e-17 93.2 61 75.4
RcHm_v2.0_Chr1g0319731 Rosa chinensis HOM05D003704 ORTHO05D005892 2.1e-17 93.2 61 75.4
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 2.1e-17 93.2 61 70.5
CSS0035088 Camellia sinensis var. sinensis HOM05D003704 ORTHO05D005892 2.7e-17 92.8 61 75.4
Psat6g100680 Pisum sativum HOM05D003704 ORTHO05D005892 2.7e-17 92.8 61 75.4
vmacro12686 Vaccinium macrocarpon HOM05D003704 ORTHO05D005892 3.5e-17 92.4 95 52.6
Hund15714 Selenicereus undatus HOM05D003704 ORTHO05D005892 4.6e-17 92.0 48 91.7
GSVIVG01000835001 Vitis vinifera HOM05D003704 ORTHO05D005892 4.6e-17 92.0 60 73.3
Nitab4.5_0001888g0060 Nicotiana tabacum HOM05D003704 ORTHO05D005892 6.0e-17 91.7 59 74.6
Cc02_g29160 Coffea canephora HOM05D003704 ORTHO05D005892 7.8e-17 91.3 59 71.2
Lj2A1006G35 Lonicera japonica HOM05D003704 ORTHO05D005892 7.8e-17 91.3 61 73.8
GSVIVG01029933001 Vitis vinifera HOM05D003704 ORTHO05D005892 7.8e-17 91.3 91 53.8
FvH4_7g02390 Fragaria vesca HOM05D003704 ORTHO05D005892 1.0e-16 90.9 95 54.7
FAN03G0678 Fragaria x ananassa HOM05D003704 ORTHO05D005892 1.0e-16 90.9 95 54.7
FAN06G0794 Fragaria x ananassa HOM05D003704 ORTHO05D005892 1.0e-16 90.9 95 54.7
Sc11g0006670 Simmondsia chinensis HOM05D003704 ORTHO05D005892 1.0e-16 90.9 59 74.6
TAR628G1325 Trochodendron aralioides HOM05D003704 ORTHO05D005892 1.3e-16 90.5 61 73.8
Peaxi162Scf00309g00333 Petunia axillaris HOM05D003704 ORTHO05D005892 1.7e-16 90.1 59 71.2
Zm00001eb018810 Zea mays HOM05D003704 ORTHO05D005892 1.7e-16 90.1 48 89.6
Actinidia21525 Actinidia chinensis HOM05D003704 ORTHO05D005892 2.3e-16 89.7 95 52.6
AL4G36070 Arabidopsis lyrata HOM05D003704 ORTHO05D005892 2.3e-16 89.7 48 87.5
AT2G38770 Arabidopsis thaliana HOM05D003704 ORTHO05D005892 2.3e-16 89.7 48 87.5
Carub.0004s2079 Capsella rubella HOM05D003704 ORTHO05D005892 2.3e-16 89.7 48 87.5
ECA234G1951 Erigeron canadensis HOM05D003704 ORTHO05D005892 3.0e-16 89.4 79 60.8
HanXRQChr17g0564051 Helianthus annuus HOM05D003704 ORTHO05D005892 3.0e-16 89.4 79 60.8
Rhsim01G0123500 Rhododendron simsii HOM05D003704 ORTHO05D005892 3.0e-16 89.4 61 72.1
Atru.chr11.2463 Acer truncatum HOM05D003704 ORTHO05D005892 3.9e-16 89.0 93 52.7
Atru.chr11.2491 Acer truncatum HOM05D003704 ORTHO05D005892 3.9e-16 89.0 93 52.7
Aa31LG5G20910 Aethionema arabicum HOM05D003704 ORTHO05D005892 3.9e-16 89.0 48 87.5
AUR62026830 Chenopodium quinoa HOM05D003704 ORTHO05D005892 3.9e-16 89.0 59 72.9
AUR62037223 Chenopodium quinoa HOM05D003704 ORTHO05D005892 3.9e-16 89.0 59 72.9
Dinv32045 Davidia involucrata HOM05D003704 ORTHO05D005892 3.9e-16 89.0 95 52.6
THA.LOC104801743 Tarenaya hassleriana HOM05D003704 ORTHO05D005892 3.9e-16 89.0 48 87.5
BcaC02g07445 Brassica carinata HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
BcaNung07214 Brassica carinata HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
A05p07400 Brassica napus HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
C04p08870 Brassica napus HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
C04p66890 Brassica napus HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
BolC4t22475H Brassica oleracea HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
BolC4t28191H Brassica oleracea HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
BraA05t19706Z Brassica rapa HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
Thhalv10016138m.g Eutrema salsugineum HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
Sp4g21160 Schrenkiella parvula HOM05D003704 ORTHO05D005892 6.6e-16 88.2 48 85.4
Aqoxy1G04161 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 8.7e-16 87.8 59 71.2
Aqoxy263s005 Aquilegia oxysepala HOM05D003704 ORTHO05D005892 8.7e-16 87.8 59 71.2
EL10Ac2g02849 Beta vulgaris HOM05D003704 ORTHO05D005892 8.7e-16 87.8 82 58.5
BcaB02g09152 Brassica carinata HOM05D003704 ORTHO05D005892 1.1e-15 87.4 48 83.3
BraA04t18425Z Brassica rapa HOM05D003704 ORTHO05D005892 1.1e-15 87.4 48 85.4
CARHR133480 Cardamine hirsuta HOM05D003704 ORTHO05D005892 1.1e-15 87.4 48 85.4
FAN10G3548 Fragaria x ananassa HOM05D003704 ORTHO05D005892 1.1e-15 87.4 93 53.8
PSO541G6018 Papaver somniferum HOM05D003704 ORTHO05D005892 1.9e-15 86.7 103 48.5
Ah.12g065080 Amaranthus hybridus HOM05D003704 ORTHO05D005892 2.5e-15 86.3 109 47.7
Migut.N01826 Erythranthe guttata HOM05D003704 ORTHO05D005892 2.5e-15 86.3 48 83.3
MBI05_g32455_MAGBIO Magnolia biondii HOM05D003704 ORTHO05D005892 3.3e-15 85.9 59 69.5
CDE02G2053 Ceratophyllum demersum HOM05D003704 ORTHO05D005892 4.3e-15 85.5 59 64.4
Nn5g29073 Nelumbo nucifera HOM05D003704 ORTHO05D005892 4.3e-15 85.5 83 57.8
PSO781G0253 Papaver somniferum HOM05D003704 ORTHO05D005892 5.6e-15 85.1 103 47.6
DCAR_003239 Daucus carota HOM05D003704 ORTHO05D005892 7.3e-15 84.7 47 83.0
Lsat_1_v5_gn_4_29820 Lactuca sativa HOM05D003704 ORTHO05D005892 7.3e-15 84.7 79 58.2
MSTRG.28042 Avicennia marina HOM05D003704 ORTHO05D005892 1.3e-14 84.0 48 83.3
RcHm_v2.0_Chr1g0320421 Rosa chinensis HOM05D003704 ORTHO05D017707 2.1e-14 83.2 60 70.0
SGA_v2.0_scaffold5G02930 Striga asiatica HOM05D003704 ORTHO05D005892 2.1e-14 83.2 48 79.2
Oeu003918.1 Olea europaea HOM05D003704 ORTHO05D005892 2.8e-14 82.8 48 79.2
ATR0564G498 Amborella trichopoda HOM05D003704 ORTHO05D005892 1.4e-13 80.5 48 77.1
CARHR288720 Cardamine hirsuta HOM05D003704 ORTHO05D005892 2.4e-13 79.7 48 79.2
SEGI_24800 Sequoiadendron giganteum HOM05D003704 ORTHO05D005892 6.9e-13 78.2 59 64.4
RcHm_v2.0_Chr1g0320981 Rosa chinensis HOM05D003704 ORTHO05D017707 7.6e-12 74.7 56 67.9
CBR_g49869 Chara braunii HOM05D003704 ORTHO05D005892 7.1e-10 68.2 58 51.7
BolC4t27541H Brassica oleracea HOM05D003704 ORTHO05D017707 1.6e-09 67.0 59 61.0
Mapoly0170s0020 Marchantia polymorpha HOM05D003704 ORTHO05D005892 3.5e-09 65.9 59 52.5
Pp3c21_9820 Physcomitrium patens HOM05D003704 ORTHO05D005892 5.1e-08 62.0 47 59.6
AagrBONN_evm.TU.Sc2ySwM_344.1100 Anthoceros agrestis HOM05D003704 ORTHO05D005892 6.7e-08 61.6 59 49.2
Migut.O00529 Erythranthe guttata HOM05D003704 ORTHO05D005892 2.8e-06 56.2 29 86.2


User provided reference genes

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