Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0130100 Salix brachista HOM05D005906 ORTHO05D007359 0.0e+00 1130.5 598 100.0
Potri.010G170400 Populus trichocarpa HOM05D005906 ORTHO05D007359 1.9e-299 1031.9 595 90.8
GSVIVG01010209001 Vitis vinifera HOM05D005906 ORTHO05D007359 6.7e-156 555.1 647 52.1
Atru.chr11.1316 Acer truncatum HOM05D005906 ORTHO05D007359 8.0e-149 531.6 643 52.3
Prupe.1G345100 Prunus persica HOM05D005906 ORTHO05D007359 2.3e-148 530.0 566 55.7
Atru.chr11.1229 Acer truncatum HOM05D005906 ORTHO05D007359 1.2e-147 527.7 643 51.9
Haze_11727 Corylus avellana HOM05D005906 ORTHO05D007359 1.5e-147 527.3 651 50.8
Dinv12052 Davidia involucrata HOM05D005906 ORTHO05D007359 3.7e-146 522.7 535 58.1
Cfa008717 Carpinus fangiana HOM05D005906 ORTHO05D007359 5.4e-145 518.8 651 49.9
QL03p043467 Quercus lobata HOM05D005906 ORTHO05D007359 2.7e-144 516.5 638 50.5
CSS0007611 Camellia sinensis var. sinensis HOM05D005906 ORTHO05D007359 3.2e-142 509.6 591 54.0
Nn3g18680 Nelumbo nucifera HOM05D005906 ORTHO05D007359 3.7e-138 496.1 576 53.5
CiPaw.05G166700 Carya illinoinensis HOM05D005906 ORTHO05D007359 2.0e-136 490.3 598 50.7
TWI53G0095 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 2.9e-135 486.5 598 51.0
Ciclev10030612m.g Citrus clementina HOM05D005906 ORTHO05D007359 6.6e-135 485.3 624 51.0
Rhsim09G0071900 Rhododendron simsii HOM05D005906 ORTHO05D007359 6.6e-135 485.3 728 45.3
Duzib251G0270 Durio zibethinus HOM05D005906 ORTHO05D007359 8.6e-135 485.0 526 56.1
TAR371G1124 Trochodendron aralioides HOM05D005906 ORTHO05D007359 1.1e-134 484.6 548 55.3
RcHm_v2.0_Chr4g0446421 Rosa chinensis HOM05D005906 ORTHO05D007359 6.1e-133 478.8 612 50.7
Thecc.02G295800 Theobroma cacao HOM05D005906 ORTHO05D007359 5.2e-132 475.7 456 60.3
Actinidia04315 Actinidia chinensis HOM05D005906 ORTHO05D007359 1.2e-131 474.6 440 60.0
Gohir.A01G145818 Gossypium hirsutum HOM05D005906 ORTHO05D007359 1.8e-129 467.2 527 54.8
TWI74G1493 Tripterygium wilfordii HOM05D005906 ORTHO05D007359 3.2e-129 466.5 601 50.1
Gorai.002G167700 Gossypium raimondii HOM05D005906 ORTHO05D007359 4.6e-128 462.6 528 54.5
Gohir.D01G138300 Gossypium hirsutum HOM05D005906 ORTHO05D007359 5.6e-126 455.7 484 56.2
Aqoxy3G04280 Aquilegia oxysepala HOM05D005906 ORTHO05D007359 3.1e-124 449.9 570 49.3
Lalb_Chr01g0001511 Lupinus albus HOM05D005906 ORTHO05D007359 5.2e-124 449.1 571 49.2
Glyma.11G103100 Glycine max HOM05D005906 ORTHO05D007359 6.8e-124 448.7 617 46.8
Glyma.11G102600 Glycine max HOM05D005906 ORTHO05D007359 1.5e-123 447.6 615 47.3
vmacro16015 Vaccinium macrocarpon HOM05D005906 ORTHO05D007359 1.6e-120 437.6 713 44.0
VMungo1127G1981 Vigna mungo HOM05D005906 ORTHO05D007359 4.6e-120 436.0 646 44.7
MD16G1000200 Malus domestica HOM05D005906 ORTHO05D007359 1.0e-119 434.9 493 54.2
Glyma.12G028100 Glycine max HOM05D005906 ORTHO05D007359 7.5e-115 418.7 610 45.7
Eucgr.G02565 Eucalyptus grandis HOM05D005906 ORTHO05D007359 3.7e-114 416.4 626 46.0
FvH4_4g36700 Fragaria vesca HOM05D005906 ORTHO05D007359 1.1e-113 414.8 615 45.2
Phvul.011G031500 Phaseolus vulgaris HOM05D005906 ORTHO05D007359 2.4e-113 413.7 619 44.3
FAN12G0559 Fragaria x ananassa HOM05D005906 ORTHO05D007359 4.1e-113 412.9 615 45.0
MBI03_g33918_MAGBIO Magnolia biondii HOM05D005906 ORTHO05D007359 5.1e-111 406.0 434 54.6
Lj3g0019719 Lotus japonicus HOM05D005906 ORTHO05D007359 1.2e-109 401.4 613 43.7
CAN.G419.29 Capsicum annuum HOM05D005906 ORTHO05D007359 1.6e-109 401.0 587 45.7
FAN07G0309 Fragaria x ananassa HOM05D005906 ORTHO05D007359 1.6e-109 401.0 611 44.7
FAN17G1621 Fragaria x ananassa HOM05D005906 ORTHO05D007359 3.6e-109 399.8 620 43.5
arahy.Tifrunner.gnm1.ann1.LWY0NT Arachis hypogaea HOM05D005906 ORTHO05D007359 8.1e-109 398.7 614 44.5
EL10Ac9g22918 Beta vulgaris HOM05D005906 ORTHO05D007359 5.2e-108 396.0 382 56.8
MELO3C024279.2 Cucumis melo HOM05D005906 ORTHO05D007359 8.9e-108 395.2 487 50.1
Oeu022359.1 Olea europaea HOM05D005906 ORTHO05D007359 1.2e-107 394.8 606 43.9
Sopen04g003870 Solanum pennellii HOM05D005906 ORTHO05D007359 4.9e-106 389.4 590 45.1
Sc10g0007040 Simmondsia chinensis HOM05D005906 ORTHO05D007359 3.2e-105 386.7 507 48.9
ATR0618G038 Amborella trichopoda HOM05D005906 ORTHO05D007359 2.7e-104 383.6 539 45.3
Solyc04g008700.3 Solanum lycopersicum HOM05D005906 ORTHO05D007359 2.7e-104 383.6 590 44.6
arahy.Tifrunner.gnm1.ann1.KE9NE3 Arachis hypogaea HOM05D005906 ORTHO05D007359 6.6e-103 379.0 675 40.6
Lju1295A4T31 Lonicera japonica HOM05D005906 ORTHO05D007359 6.6e-103 379.0 406 56.9
CsaV3_7G033650 Cucumis sativus L. HOM05D005906 ORTHO05D007359 8.6e-103 378.6 484 49.0
TPR.G21563 Trifolium pratense HOM05D005906 ORTHO05D007359 1.1e-102 378.3 353 58.1
Nitab4.5_0001983g0010 Nicotiana tabacum HOM05D005906 ORTHO05D007359 6.9e-100 369.0 545 46.1
PGR142G1078 Punica granatum HOM05D005906 ORTHO05D007359 3.4e-99 366.7 611 42.1
AUR62015199 Chenopodium quinoa HOM05D005906 ORTHO05D007359 7.6e-99 365.5 443 50.6
Peaxi162Scf00329g00515 Petunia axillaris HOM05D005906 ORTHO05D007359 1.3e-98 364.8 618 41.7
DCAR_006599 Daucus carota HOM05D005906 ORTHO05D007359 1.7e-98 364.4 489 48.7
Sed0021796 Sechium edule HOM05D005906 ORTHO05D007359 2.9e-98 363.6 491 48.9
ECA246G1682 Erigeron canadensis HOM05D005906 ORTHO05D007359 2.4e-97 360.5 534 44.2
Psat7g176600 Pisum sativum HOM05D005906 ORTHO05D007359 3.5e-96 356.7 589 42.6
HanXRQChr17g0540691 Helianthus annuus HOM05D005906 ORTHO05D007359 6.0e-96 355.9 597 42.9
AUR62017662 Chenopodium quinoa HOM05D005906 ORTHO05D007359 3.0e-95 353.6 443 49.4
MD13G1007900 Malus domestica HOM05D005906 ORTHO05D007359 9.6e-94 348.6 367 56.4
Medtr4g074440 Medicago truncatula HOM05D005906 ORTHO05D007359 1.6e-93 347.8 549 43.5
Thhalv10020134m.g Eutrema salsugineum HOM05D005906 ORTHO05D007359 1.4e-92 344.7 436 50.5
AT3G19840 Arabidopsis thaliana HOM05D005906 ORTHO05D007359 5.3e-92 342.8 477 48.4
Sp3g17850 Schrenkiella parvula HOM05D005906 ORTHO05D007359 6.9e-92 342.4 520 47.1
PSO063G6838 Papaver somniferum HOM05D005906 ORTHO05D007359 3.4e-91 340.1 602 40.0
PSO782G0435 Papaver somniferum HOM05D005906 ORTHO05D007359 3.4e-91 340.1 614 40.2
Carub.0003s1972 Capsella rubella HOM05D005906 ORTHO05D007359 1.3e-90 338.2 418 50.2
AL3G33350 Arabidopsis lyrata HOM05D005906 ORTHO05D007359 1.7e-90 337.8 433 49.4
ClCG09G001670 Citrullus lanatus HOM05D005906 ORTHO05D007359 1.1e-89 335.1 494 44.7
CANSAT64G0121 Cannabis sativa HOM05D005906 ORTHO05D007359 2.1e-88 330.9 446 49.6
BraA05t21811Z Brassica rapa HOM05D005906 ORTHO05D007359 4.3e-86 323.2 458 47.6
Manes.03G080900 Manihot esculenta HOM05D005906 ORTHO05D007359 4.3e-86 323.2 276 64.5
Migut.N00351 Erythranthe guttata HOM05D005906 ORTHO05D007359 1.3e-85 321.6 519 43.5
A05p29280 Brassica napus HOM05D005906 ORTHO05D007359 1.8e-84 317.8 491 45.4
CDE08G0300 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 4.0e-84 316.6 614 38.6
Ca_03032_v3 Cicer arietinum L. HOM05D005906 ORTHO05D007359 4.0e-84 316.6 525 42.9
C05p44790 Brassica napus HOM05D005906 ORTHO05D007359 1.5e-83 314.7 506 44.1
BcaB06g26053 Brassica carinata HOM05D005906 ORTHO05D007359 3.4e-83 313.5 473 45.5
BcaC05g28400 Brassica carinata HOM05D005906 ORTHO05D007359 3.8e-82 310.1 506 44.1
BolC5t33205H Brassica oleracea HOM05D005906 ORTHO05D007359 2.4e-81 307.4 480 45.6
Os10g0485000 Oryza sativa ssp. japonica HOM05D005906 ORTHO05D007359 1.2e-80 305.1 568 40.5
Nitab4.5_0000129g0230 Nicotiana tabacum HOM05D005906 ORTHO05D007359 7.9e-80 302.4 626 37.4
CDE04G3187 Ceratophyllum demersum HOM05D005906 ORTHO05D007359 3.7e-77 293.5 613 37.4
SEGI_27443 Sequoiadendron giganteum HOM05D005906 ORTHO05D007359 4.8e-77 293.1 446 42.4
Lsat_1_v5_gn_0_9300 Lactuca sativa HOM05D005906 ORTHO05D007359 7.6e-75 285.8 589 39.4
CARHR095360 Cardamine hirsuta HOM05D005906 ORTHO05D007359 4.9e-74 283.1 256 60.9
SGA_v2.0_scaffold317G48430 Striga asiatica HOM05D005906 ORTHO05D007359 8.4e-74 282.3 533 41.7
HPP92_015160 Vanilla planifolia HOM05D005906 ORTHO05D007359 7.9e-72 275.8 610 37.0
COL.COLO4_27510 Corchorus olitorius HOM05D005906 ORTHO05D007359 1.1e-62 245.4 271 53.1
unitig_26.g9977 Utricularia gibba HOM05D005906 ORTHO05D007359 1.1e-60 238.8 485 38.4
Aa31LG8G6610 Aethionema arabicum HOM05D005906 ORTHO05D007359 4.1e-60 236.9 468 39.7
Mapoly0048s0088 Marchantia polymorpha HOM05D005906 ORTHO05D007359 4.5e-59 233.4 601 35.9
CBR_g3777 Chara braunii HOM05D005906 ORTHO05D007359 1.2e-56 225.3 262 51.5
COL.COLO4_16625 Corchorus olitorius HOM05D005906 ORTHO05D007359 2.7e-56 224.2 185 67.6
Pp3c7_20890 Physcomitrium patens HOM05D005906 ORTHO05D007359 4.6e-56 223.4 536 36.2
Pp3c11_2890 Physcomitrium patens HOM05D005906 ORTHO05D007359 6.7e-55 219.5 505 37.4
arahy.Tifrunner.gnm1.ann1.HBZ9IW Arachis hypogaea HOM05D005906 ORTHO05D007359 2.2e-50 204.5 210 52.9
HanXRQChr13g0425271 Helianthus annuus HOM05D005906 ORTHO05D007359 2.8e-45 187.6 225 48.9
SMO347G0007 Selaginella moellendorffii HOM05D005906 ORTHO05D007359 2.4e-44 184.5 483 36.9
Zm00001eb221360 Zea mays HOM05D005906 ORTHO05D007359 1.5e-25 122.1 102 65.7
Cpa.g.c31481.2 Carica papaya HOM05D005906 ORTHO05D007359 1.4e-23 115.5 308 37.3
CsaV3_7G033660 Cucumis sativus L. HOM05D000532 ORTHO05D002745 1.8e-12 78.6 113 51.3
Cre09.g393551 Chlamydomonas reinhardtii HOM05D005906 ORTHO05D007359 3.2e-12 77.8 88 39.8
MELO3C024280.2 Cucumis melo HOM05D000532 ORTHO05D002745 2.7e-11 74.7 113 49.6
Nitab4.5_0005621g0040 Nicotiana tabacum HOM05D005906 ORTHO05D007359 4.3e-09 67.4 113 46.9
Lsat_1_v5_gn_8_74860 Lactuca sativa HOM05D005906 ORTHO05D007359 1.1e-07 62.8 96 46.9
Potri.008G085150 Populus trichocarpa HOM05D005906 ORTHO05D007359 1.1e-07 62.8 47 68.1
Nitab4.5_0000129g0240 Nicotiana tabacum HOM05D005906 ORTHO05D007359 1.8e-07 62.0 28 96.4
Nitab4.5_0001093g0090 Nicotiana tabacum HOM05D002048 ORTHO05D002146 3.1e-07 61.2 520 23.5
Ca_03031_v3 Cicer arietinum L. HOM05D005906 ORTHO05D007359 8.9e-07 59.7 27 96.3
SEGI_19557 Sequoiadendron giganteum HOM05D005906 ORTHO05D007359 1.5e-06 58.9 27 88.9


User provided reference genes

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