Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 0.0e+00 1088.9 572 100.0
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 8.5e-257 890.2 574 85.7
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 1.7e-172 610.1 613 59.9
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 2.1e-170 603.2 587 56.7
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 9.3e-163 577.8 589 58.7
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 1.0e-161 574.3 596 58.6
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 5.8e-157 558.5 605 53.4
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 5.8e-157 558.5 591 54.3
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 2.5e-155 553.1 593 53.3
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 6.0e-154 548.5 591 56.2
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 8.7e-153 544.7 624 51.4
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 1.5e-152 543.9 591 53.3
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 1.6e-151 540.4 680 54.3
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 1.2e-149 534.3 606 55.4
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 2.6e-149 533.1 600 56.7
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 4.5e-149 532.3 581 56.3
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 2.5e-147 526.6 585 54.5
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 4.2e-147 525.8 439 65.1
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 5.5e-147 525.4 596 57.0
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 7.1e-147 525.0 610 53.4
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 9.3e-147 524.6 588 57.1
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 1.6e-146 523.9 595 56.8
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 1.6e-146 523.9 587 56.0
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 1.1e-144 517.7 586 55.8
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.5e-144 517.3 600 53.8
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 2.8e-143 513.1 613 54.6
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 2.4e-142 510.0 524 55.2
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 1.5e-141 507.3 654 51.2
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 1.1e-139 501.1 681 48.2
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 3.2e-139 499.6 596 53.9
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 1.6e-138 497.3 596 53.9
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 9.7e-136 488.0 665 48.4
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 3.7e-135 486.1 690 48.3
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 1.4e-134 484.2 598 50.5
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.2e-133 481.1 561 53.3
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 3.4e-133 479.6 565 54.7
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 5.9e-133 478.8 590 52.9
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 5.9e-133 478.8 657 49.6
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 7.7e-133 478.4 598 53.0
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 7.7e-133 478.4 585 53.7
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 7.9e-130 468.4 585 51.8
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 7.9e-130 468.4 585 51.8
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 7.9e-130 468.4 432 64.8
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 1.4e-129 467.6 595 52.8
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 2.3e-129 466.8 600 51.3
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 6.7e-129 465.3 496 57.3
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 8.8e-129 464.9 427 61.6
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 1.5e-128 464.2 585 51.3
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 1.3e-127 461.1 675 48.4
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 2.8e-127 459.9 617 49.3
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 3.7e-127 459.5 643 48.7
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 1.4e-126 457.6 586 51.4
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 5.3e-126 455.7 580 52.9
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 5.3e-126 455.7 615 49.6
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 1.5e-125 454.1 580 52.6
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 3.5e-125 453.0 582 52.1
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 4.5e-125 452.6 599 48.2
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 1.3e-124 451.1 608 49.5
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 1.7e-124 450.7 547 51.2
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 5.0e-124 449.1 594 50.5
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 8.5e-124 448.4 617 43.9
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 8.0e-122 441.8 600 50.3
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 8.0e-122 441.8 386 66.1
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 6.7e-121 438.7 576 50.5
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.1e-120 438.0 598 47.8
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 1.5e-120 437.6 649 44.2
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 1.5e-120 437.6 532 52.6
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 2.0e-120 437.2 327 64.5
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 2.6e-120 436.8 323 67.8
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 1.3e-119 434.5 360 60.3
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 1.3e-119 434.5 612 47.2
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 4.8e-119 432.6 570 48.9
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.4e-118 431.0 582 50.7
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 1.4e-118 431.0 582 46.6
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 2.4e-118 430.3 541 47.5
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 3.1e-118 429.9 476 56.3
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 4.1e-118 429.5 575 46.6
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 5.3e-118 429.1 423 60.3
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 5.3e-118 429.1 505 51.3
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 7.7e-117 425.2 568 50.2
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 1.7e-116 424.1 551 48.5
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 4.0e-113 412.9 323 63.2
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 2.2e-111 407.1 651 45.0
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 3.7e-111 406.4 614 47.1
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 3.8e-108 396.4 570 48.9
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 8.5e-108 395.2 627 44.0
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 1.1e-107 394.8 295 65.4
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 1.9e-107 394.0 511 44.6
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 7.5e-104 382.1 409 54.0
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 1.8e-102 377.5 369 56.9
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 9.5e-99 365.2 565 45.1
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 5.2e-97 359.4 570 45.4
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.0e-96 357.5 495 48.3
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 3.4e-96 356.7 489 47.0
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 7.5e-96 355.5 487 45.6
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.6e-93 347.8 429 50.3
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 2.0e-93 347.4 420 47.6
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 2.0e-93 347.4 420 47.6
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 3.9e-92 343.2 420 51.0
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 8.6e-92 342.0 419 51.3
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 3.3e-91 340.1 367 49.0
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 1.0e-89 335.1 674 40.2
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.2e-88 331.6 556 43.3
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 1.1e-83 315.1 654 36.7
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 1.5e-83 314.7 415 44.6
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 4.3e-83 313.2 455 50.5
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 4.3e-83 313.2 664 34.6
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 7.5e-80 302.4 604 40.2
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 1.3e-79 301.6 471 43.1
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 1.6e-77 294.7 329 45.6
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 2.1e-77 294.3 317 52.4
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 1.1e-75 288.5 331 44.4
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 1.6e-74 284.6 598 36.0
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 2.9e-71 273.9 331 43.5
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 3.3e-59 233.8 458 36.7
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 7.1e-54 216.1 302 47.7
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 2.1e-53 214.5 293 51.9
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 1.5e-51 208.4 279 41.2
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 7.3e-51 206.1 124 79.0
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 2.3e-44 184.5 379 33.0
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 2.7e-37 161.0 305 33.8
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 1.9e-30 138.3 93 73.1
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.5e-24 118.6 322 34.5
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 1.5e-24 118.6 184 38.0
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 1.6e-21 108.6 73 69.9
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 1.4e-20 105.5 113 52.2
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 5.0e-15 87.0 62 62.9
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 1.4e-12 79.0 60 55.0
Oeu017817.1 Olea europaea HOM05D001353 ORTHO05D002359 1.1e-11 75.9 97 36.1
Psat7g050000 Pisum sativum HOM05D005778 ORTHO05D007245 3.1e-09 67.8 115 47.8
Oeu028353.1 Olea europaea HOM05D005778 ORTHO05D007245 4.1e-09 67.4 45 71.1
Sabra05G0071600 Salix brachista HOM05D000786 ORTHO05D006216 7.0e-09 66.6 155 32.9
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 2.0e-08 65.1 53 58.5


User provided reference genes

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