Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 2.1e-262 909.1 674 100.0
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 4.5e-217 758.4 682 88.7
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 3.9e-192 675.6 683 82.3
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 2.1e-158 563.5 674 74.9
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 1.4e-157 560.8 658 74.9
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 1.1e-154 551.2 660 75.6
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 5.1e-152 542.3 613 77.3
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 1.1e-151 541.2 673 72.4
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 3.3e-151 539.7 678 71.8
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 3.3e-151 539.7 672 73.8
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 4.0e-149 532.7 602 79.1
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 1.4e-146 524.2 602 78.7
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 2.5e-146 523.5 671 72.3
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 3.2e-146 523.1 602 76.6
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 7.1e-146 521.9 596 77.3
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 7.1e-146 521.9 658 71.9
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 1.6e-145 520.8 600 75.7
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 2.1e-145 520.4 672 71.9
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 2.7e-145 520.0 668 73.8
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 3.5e-145 519.6 675 72.3
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 6.0e-145 518.8 602 78.6
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 2.3e-144 516.9 671 71.7
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 8.7e-144 515.0 598 72.4
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 1.1e-143 514.6 607 73.3
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 1.5e-143 514.2 672 71.3
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 1.5e-143 514.2 675 71.1
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 4.3e-143 512.7 598 73.9
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 4.3e-143 512.7 764 51.4
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 7.4e-143 511.9 626 73.2
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 7.4e-143 511.9 648 68.2
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 2.8e-142 510.0 672 72.0
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 3.1e-141 506.5 650 70.6
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 6.9e-141 505.4 598 71.6
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 6.9e-141 505.4 607 73.0
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 1.2e-140 504.6 627 73.7
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 1.0e-139 501.5 543 83.6
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 1.7e-139 500.7 623 68.7
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 1.4e-138 497.7 596 77.2
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 2.7e-137 493.4 572 80.2
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 7.9e-137 491.9 667 70.3
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 1.1e-135 488.0 655 71.3
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 1.3e-134 484.6 541 81.0
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 1.4e-133 481.1 657 72.0
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 9.0e-133 478.4 653 70.6
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 5.9e-132 475.7 629 70.4
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 8.5e-131 471.9 654 67.3
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 3.2e-130 469.9 637 71.7
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 1.8e-128 464.2 619 69.1
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 6.7e-128 462.2 589 74.7
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 2.0e-127 460.7 639 68.7
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 6.9e-125 452.2 594 73.4
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 1.3e-123 448.0 615 71.9
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 1.5e-119 434.5 655 58.6
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 1.7e-118 431.0 576 76.0
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 3.1e-117 426.8 537 76.7
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 5.9e-116 422.5 653 67.4
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 3.8e-115 419.9 678 66.4
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 3.6e-113 413.3 592 70.8
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 1.3e-110 404.8 593 66.8
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 2.4e-109 400.6 669 65.3
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 2.6e-108 397.1 541 74.5
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 2.2e-107 394.0 599 63.9
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 2.8e-102 377.1 596 66.4
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 9.1e-101 372.1 654 57.2
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 2.7e-100 370.5 589 69.8
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 1.0e-99 368.6 589 69.8
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 1.9e-98 364.4 573 47.8
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 8.8e-96 355.5 598 66.9
Haze_01685 Corylus avellana HOM05D007322 ORTHO05D009029 1.3e-94 351.7 229 77.3
ClCG10G013500 Citrullus lanatus HOM05D007322 ORTHO05D009029 3.5e-92 343.6 234 74.8
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 3.3e-90 337.0 595 59.7
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 2.1e-89 334.3 562 67.4
DCAR_025358 Daucus carota HOM05D007322 ORTHO05D009029 2.3e-88 330.9 235 68.9
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 5.2e-88 329.7 595 59.2
FAN08G0261 Fragaria x ananassa HOM05D007322 ORTHO05D009029 1.2e-87 328.6 226 73.5
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 3.7e-86 323.6 581 67.0
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 6.3e-86 322.8 594 64.1
Eucgr.G00576 Eucalyptus grandis HOM05D007322 ORTHO05D009029 8.6e-83 312.4 235 66.0
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 2.3e-80 304.3 596 63.6
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 5.2e-80 303.1 589 63.8
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 2.6e-79 300.8 592 63.7
Nitab4.5_0000001g0160 Nicotiana tabacum HOM05D007322 ORTHO05D009029 4.4e-79 300.1 222 68.0
Nitab4.5_0003788g0020 Nicotiana tabacum HOM05D007322 ORTHO05D009029 6.6e-75 286.2 205 69.3
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 4.4e-71 273.5 541 67.3
FAN04G1727 Fragaria x ananassa HOM05D001260 ORTHO05D002424 4.3e-66 256.9 270 63.3
Peaxi162Scf00152g01437 Petunia axillaris HOM05D007322 ORTHO05D009029 1.1e-61 242.3 176 69.3
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 4.1e-61 240.4 497 68.6
Oeu008898.1 Olea europaea HOM05D007322 ORTHO05D009029 1.3e-51 208.8 192 67.7
Nitab4.5_0000001g0170 Nicotiana tabacum HOM05D007322 ORTHO05D009029 3.6e-49 200.7 205 62.4
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 3.1e-48 197.6 216 45.4
Peaxi162Scf00152g01436 Petunia axillaris HOM05D007322 ORTHO05D009029 3.4e-39 167.5 203 57.1
DCAR_025359 Daucus carota HOM05D007322 ORTHO05D009029 1.3e-38 165.6 152 69.7
Nitab4.5_0003788g0010 Nicotiana tabacum HOM05D007322 ORTHO05D009029 2.9e-38 164.5 155 67.1
Cpa.g.sc113.59 Carica papaya HOM05D007322 ORTHO05D009029 4.6e-36 157.1 119 66.4
Haze_01695 Corylus avellana HOM05D004517 ORTHO05D005366 1.0e-35 156.0 133 62.4
Cpa.g.c42393 Carica papaya HOM05D007322 ORTHO05D009029 6.2e-33 146.7 172 51.7
Actinidia26149 Actinidia chinensis HOM05D007322 ORTHO05D009029 5.0e-22 110.5 115 67.0
PGSC0003DMG400008423 Solanum tuberosum HOM05D007322 ORTHO05D009029 2.1e-20 105.1 70 70.0
Pp3c24_4430 Physcomitrium patens HOM05D007322 ORTHO05D009029 2.0e-15 88.6 151 33.1
Peaxi162Scf00427g00004 Petunia axillaris HOM05D007322 ORTHO05D009029 1.0e-14 86.3 53 71.7
Medtr2g036560 Medicago truncatula HOM05D003056 ORTHO05D003422 3.7e-09 67.8 183 23.0
Ca_02033_v3 Cicer arietinum L. HOM05D003056 ORTHO05D003422 8.2e-09 66.6 177 22.0
SEGI_07964 Sequoiadendron giganteum HOM05D006217 ORTHO05D008480 1.8e-08 65.5 121 26.4
TPR.G20572 Trifolium pratense HOM05D003056 ORTHO05D003422 3.1e-08 64.7 115 27.8
Oeu027802.1 Olea europaea HOM05D007322 ORTHO05D009029 1.5e-07 62.4 68 48.5
Sabra17G0065200 Salix brachista HOM05D007322 ORTHO05D009029 1.5e-07 62.4 120 37.5
Psat1g146880 Pisum sativum HOM05D003056 ORTHO05D003422 4.5e-07 60.8 115 27.0
Mapoly0063s0054 Marchantia polymorpha HOM05D003056 ORTHO05D003422 7.7e-07 60.1 179 20.1
Nn8g40410 Nelumbo nucifera HOM05D003056 ORTHO05D003422 7.7e-07 60.1 182 22.5
Sabra07G0055900 Salix brachista HOM05D000293 ORTHO05D009029 7.7e-07 60.1 92 42.4
Os10g0442700 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D009766 5.0e-06 57.4 64 42.2
Sed0009936 Sechium edule HOM05D003056 ORTHO05D003422 8.5e-06 56.6 95 29.5


User provided reference genes

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