Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0018500 Salix brachista HOM05D004102 ORTHO05D050451 2.3e-96 355.5 172 100.0
arahy.Tifrunner.gnm1.ann1.3W1S0R Arachis hypogaea HOM05D004102 ORTHO05D005307 4.2e-10 68.9 34 94.1
arahy.Tifrunner.gnm1.ann1.KRWI3G Arachis hypogaea HOM05D004102 ORTHO05D005307 4.2e-10 68.9 34 94.1
Haze_24635 Corylus avellana HOM05D004102 ORTHO05D005307 4.2e-10 68.9 57 66.7
Lj2g0002321 Lotus japonicus HOM05D004102 ORTHO05D005307 4.2e-10 68.9 34 94.1
Lj5g0004279 Lotus japonicus HOM05D004102 ORTHO05D005307 4.2e-10 68.9 34 94.1
Lalb_Chr06g0170471 Lupinus albus HOM05D004102 ORTHO05D005307 4.2e-10 68.9 34 94.1
Sabra05G0184700 Salix brachista HOM05D004102 ORTHO05D349640 7.2e-10 68.2 51 70.6
Eucgr.B01550 Eucalyptus grandis HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
FvH4_2g21371 Fragaria vesca HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
FAN15G3235 Fragaria x ananassa HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
FAN20G2335 Fragaria x ananassa HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
FAN24G0573 Fragaria x ananassa HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
FAN27G0190 Fragaria x ananassa HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
MD05G1196500 Malus domestica HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
MD10G1183700 Malus domestica HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
Prupe.8G222900 Prunus persica HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
RcHm_v2.0_Chr6g0287971 Rosa chinensis HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
Sed0028046 Sechium edule HOM05D004102 ORTHO05D005307 1.2e-09 67.4 34 91.2
Cfa002432 Carpinus fangiana HOM05D004102 ORTHO05D005307 1.6e-09 67.0 34 91.2
CiPaw.03G264900 Carya illinoinensis HOM05D004102 ORTHO05D005307 1.6e-09 67.0 34 91.2
Ciclev10024065m.g Citrus clementina HOM05D004102 ORTHO05D005307 1.6e-09 67.0 34 91.2
Manes.12G032800 Manihot esculenta HOM05D004102 ORTHO05D005307 1.6e-09 67.0 34 91.2
Nn3g19665 Nelumbo nucifera HOM05D004102 ORTHO05D005307 1.6e-09 67.0 34 91.2
Potri.005G224900 Populus trichocarpa HOM05D004102 ORTHO05D005307 1.6e-09 67.0 34 91.2
Sabra05G0173500 Salix brachista HOM05D004102 ORTHO05D005307 1.6e-09 67.0 34 91.2
TWI18G1245 Tripterygium wilfordii HOM05D004102 ORTHO05D005307 1.6e-09 67.0 34 91.2
CSS0001085 Camellia sinensis var. sinensis HOM05D004102 ORTHO05D005307 2.1e-09 66.6 34 91.2
Ca_09679_v3 Cicer arietinum L. HOM05D004102 ORTHO05D005307 2.1e-09 66.6 34 91.2
Dinv34632 Davidia involucrata HOM05D004102 ORTHO05D005307 2.1e-09 66.6 34 91.2
Hma1.2p1_0273F.1_g109650 Hydrangea macrophylla HOM05D004102 ORTHO05D005307 2.1e-09 66.6 34 91.2
Medtr1g069910 Medicago truncatula HOM05D004102 ORTHO05D005307 2.1e-09 66.6 34 91.2
Psat6g041920 Pisum sativum HOM05D004102 ORTHO05D005307 2.1e-09 66.6 34 91.2
TPR.G23973 Trifolium pratense HOM05D004102 ORTHO05D005307 2.1e-09 66.6 34 91.2
TAR362G0337 Trochodendron aralioides HOM05D004102 ORTHO05D005307 2.1e-09 66.6 34 91.2
Atru.chr5.1694 Acer truncatum HOM05D004102 ORTHO05D005307 2.7e-09 66.2 34 91.2
Actinidia07299 Actinidia chinensis HOM05D004102 ORTHO05D005307 2.7e-09 66.2 34 91.2
vmacro02666 Vaccinium macrocarpon HOM05D004102 ORTHO05D005307 2.7e-09 66.2 40 80.0
EL10As5g23471 Beta vulgaris HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
Cpa.g.sc50.12 Carica papaya HOM05D004102 ORTHO05D005307 3.6e-09 65.9 36 86.1
CDE03G0492 Ceratophyllum demersum HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 85.3
Duzib133G0778 Durio zibethinus HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
Duzib138G0514 Durio zibethinus HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
Glyma.10G037300 Glycine max HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
Glyma.13G123700 Glycine max HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
Gohir.A07G213150 Gossypium hirsutum HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
Gohir.A07G213200 Gossypium hirsutum HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
Gohir.D07G219350 Gossypium hirsutum HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
Gorai.001G253800 Gossypium raimondii HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
PGR031G2496 Punica granatum HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
QL09p038899 Quercus lobata HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
SGA_v2.0_scaffold2G00877 Striga asiatica HOM05D004102 ORTHO05D005307 3.6e-09 65.9 34 88.2
Ah.11g049770 Amaranthus hybridus HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 88.2
Aqoxy5G00225 Aquilegia oxysepala HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 88.2
MSTRG.12532 Avicennia marina HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 88.2
AUR62011867 Chenopodium quinoa HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 88.2
AUR62024710 Chenopodium quinoa HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 88.2
Lj1A67T41 Lonicera japonica HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 88.2
Mapoly0107s0024 Marchantia polymorpha HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 85.3
Os12g0641500 Oryza sativa ssp. japonica HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 88.2
Thecc.01G257700 Theobroma cacao HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 85.3
unitig_37.g12599 Utricularia gibba HOM05D001236 ORTHO05D005307 4.7e-09 65.5 34 88.2
Zm00001eb038490 Zea mays HOM05D004102 ORTHO05D005307 4.7e-09 65.5 34 88.2
CAN.G771.28 Capsicum annuum HOM05D004102 ORTHO05D005307 6.1e-09 65.1 34 85.3
Sc17g0000640 Simmondsia chinensis HOM05D004102 ORTHO05D005307 6.1e-09 65.1 34 88.2
Rhsim13G0035400 Rhododendron simsii HOM05D004102 ORTHO05D005307 8.0e-09 64.7 34 88.2
Nitab4.5_0000470g0060 Nicotiana tabacum HOM05D004102 ORTHO05D005307 1.0e-08 64.3 34 85.3
Nitab4.5_0006457g0030 Nicotiana tabacum HOM05D004102 ORTHO05D005307 1.0e-08 64.3 34 85.3
Peaxi162Scf00855g00004 Petunia axillaris HOM05D004102 ORTHO05D005307 1.0e-08 64.3 34 85.3
SHI09769 Sapria himalayana HOM05D004102 ORTHO05D005307 1.0e-08 64.3 34 85.3
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 1.0e-08 64.3 34 85.3
CANSAT01G2283 Cannabis sativa HOM05D004102 ORTHO05D005307 1.8e-08 63.5 34 82.4
MBI07_g16928_MAGBIO Magnolia biondii HOM05D004102 ORTHO05D005307 1.8e-08 63.5 34 85.3
Pp3c12_10030 Physcomitrium patens HOM05D004102 ORTHO05D005307 1.8e-08 63.5 34 82.4
AagrBONN_evm.TU.Sc2ySwM_344.1414__1415 Anthoceros agrestis HOM05D004102 ORTHO05D005307 2.3e-08 63.2 34 82.4
ClCG09G008240 Citrullus lanatus HOM05D004102 ORTHO05D005307 2.3e-08 63.2 34 85.3
Cc01_g18290 Coffea canephora HOM05D004102 ORTHO05D005307 2.3e-08 63.2 34 85.3
MELO3C012730.2 Cucumis melo HOM05D004102 ORTHO05D005307 2.3e-08 63.2 34 85.3
CsaV3_7G026800 Cucumis sativus L. HOM05D004102 ORTHO05D005307 2.3e-08 63.2 34 85.3
Potri.002G022400 Populus trichocarpa HOM05D000270 ORTHO05D050451 2.3e-08 63.2 64 54.7
SEGI_02214 Sequoiadendron giganteum HOM05D004102 ORTHO05D005307 2.3e-08 63.2 34 82.4
VMungo0720G2324 Vigna mungo HOM05D004102 ORTHO05D005307 2.3e-08 63.2 34 85.3
HanXRQChr02g0038071 Helianthus annuus HOM05D004102 ORTHO05D005307 3.0e-08 62.8 34 79.4
PSO210G1261 Papaver somniferum HOM05D004102 ORTHO05D005307 3.0e-08 62.8 34 85.3
PSO832G3143 Papaver somniferum HOM05D004102 ORTHO05D005307 3.0e-08 62.8 34 85.3
Solyc06g083870.3 Solanum lycopersicum HOM05D004102 ORTHO05D005307 3.0e-08 62.8 34 82.4
Sopen06g035270 Solanum pennellii HOM05D004102 ORTHO05D005307 3.0e-08 62.8 34 82.4
Lsat_1_v5_gn_8_92740 Lactuca sativa HOM05D004102 ORTHO05D005307 3.9e-08 62.4 34 82.4
COL.COLO4_03878 Corchorus olitorius HOM05D004102 ORTHO05D005307 5.2e-08 62.0 34 79.4
COL.COLO4_04038 Corchorus olitorius HOM05D004102 ORTHO05D005307 5.2e-08 62.0 34 79.4
Medtr1g058610 Medicago truncatula HOM05D004102 ORTHO05D005307 5.2e-08 62.0 34 85.3
TPR.G24931 Trifolium pratense HOM05D004102 ORTHO05D005307 5.2e-08 62.0 33 87.9
Migut.N02206 Erythranthe guttata HOM05D004102 ORTHO05D005307 6.7e-08 61.6 33 84.8
AL5G35750 Arabidopsis lyrata HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
AT3G54670 Arabidopsis thaliana HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
A03p43760 Brassica napus HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
A09p47620 Brassica napus HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
C03p53990 Brassica napus HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
C04p37830 Brassica napus HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
C08p29820 Brassica napus HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
BolC3t17695H Brassica oleracea HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
BolC4t25359H Brassica oleracea HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
BolC8t50593H Brassica oleracea HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
BraA03t13511Z Brassica rapa HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
BraA09t40218Z Brassica rapa HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
Carub.0005s2127 Capsella rubella HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
ECA236G1622 Erigeron canadensis HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
Thhalv10010074m.g Eutrema salsugineum HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
Oeu025851.5 Olea europaea HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 82.4
Phvul.007G192600 Phaseolus vulgaris HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 82.4
Sp5g07780 Schrenkiella parvula HOM05D004102 ORTHO05D005307 8.8e-08 61.2 34 79.4
CARHR164590 Cardamine hirsuta HOM05D004102 ORTHO05D005307 1.1e-07 60.8 34 79.4
Medtr0003s0460 Medicago truncatula HOM05D004102 ORTHO05D005307 1.1e-07 60.8 34 79.4
DCAR_005687 Daucus carota HOM05D004102 ORTHO05D005307 1.5e-07 60.5 34 82.4
Aa31sc35G50 Aethionema arabicum HOM05D004102 ORTHO05D005307 2.0e-07 60.1 34 79.4
CAN.G89.12 Capsicum annuum HOM05D004102 ORTHO05D005307 2.0e-07 60.1 35 74.3
THA.LOC104798817 Tarenaya hassleriana HOM05D004102 ORTHO05D005307 2.6e-07 59.7 34 76.5
CAN.G646.2 Capsicum annuum HOM05D004102 ORTHO05D005307 3.3e-07 59.3 34 76.5
Peaxi162Scf00013g01122 Petunia axillaris HOM05D004102 ORTHO05D005307 1.7e-06 57.0 34 76.5


User provided reference genes

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