Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 1.7e-39 165.6 87 100.0
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 1.9e-35 152.1 79 98.7
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 6.8e-33 143.7 85 85.9
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 8.9e-33 143.3 79 91.1
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 8.9e-33 143.3 79 91.1
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 8.9e-33 143.3 79 91.1
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 8.9e-33 143.3 79 91.1
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 8.9e-33 143.3 79 91.1
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 1.2e-32 142.9 83 86.7
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.5e-32 142.5 79 91.1
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 2.0e-32 142.1 81 88.9
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 2.6e-32 141.7 82 86.6
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 3.4e-32 141.4 79 89.9
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 3.4e-32 141.4 79 89.9
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 7.5e-32 140.2 79 88.6
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 9.8e-32 139.8 79 88.6
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 1.3e-31 139.4 79 88.6
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.3e-31 139.4 79 88.6
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.7e-31 139.0 79 88.6
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 2.2e-31 138.7 84 84.5
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 2.9e-31 138.3 79 88.6
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 3.7e-31 137.9 82 82.9
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 3.7e-31 137.9 82 82.9
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 3.7e-31 137.9 82 82.9
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 3.7e-31 137.9 82 82.9
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 3.7e-31 137.9 79 87.3
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 6.4e-31 137.1 82 84.1
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 6.4e-31 137.1 86 76.7
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 6.4e-31 137.1 85 80.0
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 8.3e-31 136.7 85 80.0
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 8.3e-31 136.7 79 86.1
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 1.1e-30 136.3 79 86.1
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.4e-30 136.0 82 81.7
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 1.4e-30 136.0 80 85.0
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 1.4e-30 136.0 79 87.3
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 1.4e-30 136.0 82 82.9
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.9e-30 135.6 81 84.0
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 2.4e-30 135.2 79 83.5
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 3.2e-30 134.8 86 80.2
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 4.1e-30 134.4 79 86.1
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 4.1e-30 134.4 79 84.8
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.1e-30 134.4 81 84.0
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 4.1e-30 134.4 79 84.8
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 4.1e-30 134.4 82 82.9
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 4.1e-30 134.4 79 84.8
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 4.1e-30 134.4 80 85.0
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 5.4e-30 134.0 82 81.7
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 5.4e-30 134.0 79 88.6
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 5.4e-30 134.0 79 84.8
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 5.4e-30 134.0 75 88.0
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 7.0e-30 133.7 85 80.0
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 7.0e-30 133.7 83 80.7
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 9.2e-30 133.3 79 83.5
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 9.2e-30 133.3 79 86.1
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 1.2e-29 132.9 80 85.0
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 1.2e-29 132.9 79 83.5
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 1.2e-29 132.9 82 82.9
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.6e-29 132.5 79 84.8
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.6e-29 132.5 82 81.7
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 1.6e-29 132.5 85 77.6
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 2.1e-29 132.1 79 83.5
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 2.1e-29 132.1 79 83.5
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 2.7e-29 131.7 85 78.8
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 2.7e-29 131.7 79 82.3
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 2.7e-29 131.7 84 78.6
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 3.5e-29 131.3 79 83.5
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 3.5e-29 131.3 79 83.5
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 4.6e-29 131.0 80 83.8
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 4.6e-29 131.0 82 80.5
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 6.0e-29 130.6 82 82.9
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 7.8e-29 130.2 79 82.3
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 7.8e-29 130.2 79 82.3
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 7.8e-29 130.2 83 78.3
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 7.8e-29 130.2 85 75.3
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.0e-28 129.8 80 81.2
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 1.0e-28 129.8 82 79.3
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 1.7e-28 129.0 79 79.7
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 1.7e-28 129.0 90 81.1
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.7e-28 129.0 79 82.3
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 2.3e-28 128.6 80 83.8
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 2.3e-28 128.6 80 83.8
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 2.3e-28 128.6 79 81.0
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 3.0e-28 128.3 79 81.0
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 3.0e-28 128.3 79 81.0
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 3.9e-28 127.9 81 77.8
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 5.1e-28 127.5 81 77.8
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 6.6e-28 127.1 80 81.2
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 1.1e-27 126.3 79 79.7
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.5e-27 125.9 79 79.7
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.9e-27 125.6 81 75.3
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 1.9e-27 125.6 79 78.5
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 5.6e-27 124.0 77 77.9
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 7.3e-27 123.6 86 74.4
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 9.5e-27 123.2 79 77.2
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 2.1e-26 122.1 77 79.2
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 4.7e-26 120.9 75 81.3
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 6.2e-26 120.6 105 63.8
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 6.8e-25 117.1 79 72.2
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 6.8e-25 117.1 79 70.9
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 4.4e-24 114.4 79 70.9
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 1.3e-23 112.8 129 52.7
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 1.3e-23 112.8 79 74.7
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 2.4e-22 108.6 79 72.2
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.1e-21 105.5 63 81.0
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 2.8e-18 95.1 56 78.6
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.6e-13 79.3 42 90.5
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 1.3e-10 69.7 49 67.3
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 2.1e-10 68.9 70 55.7
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 1.1e-09 66.6 37 86.5
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 3.8e-07 58.2 30 90.0


User provided reference genes

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