Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 8.6e-162 573.5 280 100.0
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 4.9e-141 504.6 253 98.0
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 3.5e-139 498.4 253 97.6
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 7.6e-110 401.0 264 71.2
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.3e-106 390.2 279 65.9
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 8.7e-106 387.5 266 65.0
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 1.1e-105 387.1 266 65.0
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 1.6e-104 383.3 265 65.7
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 1.1e-103 380.6 272 64.3
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 1.1e-103 380.6 267 64.8
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 7.6e-102 374.4 270 63.7
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 8.4e-101 370.9 270 63.0
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 1.9e-100 369.8 275 63.6
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 1.2e-99 367.1 275 61.5
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 1.2e-99 367.1 265 63.4
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 1.6e-99 366.7 268 63.1
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 4.6e-99 365.2 276 61.2
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 6.1e-99 364.8 268 61.9
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 6.1e-99 364.8 268 61.9
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 1.0e-98 364.0 269 62.5
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 3.0e-98 362.5 269 61.7
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 3.0e-98 362.5 267 61.8
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 3.0e-98 362.5 280 60.4
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 3.9e-98 362.1 267 61.0
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 6.7e-98 361.3 277 58.8
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 1.5e-97 360.1 270 62.2
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 1.9e-97 359.8 275 58.5
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 1.9e-97 359.8 268 60.8
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 3.3e-97 359.0 277 60.6
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 3.3e-97 359.0 267 62.9
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 4.3e-97 358.6 281 60.1
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 5.7e-97 358.2 281 60.1
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 1.3e-96 357.1 279 59.9
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 3.7e-96 355.5 267 63.3
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 4.8e-96 355.1 272 61.4
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 4.8e-96 355.1 277 59.9
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 8.2e-96 354.4 268 61.6
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 8.2e-96 354.4 286 58.4
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 1.1e-95 354.0 275 57.8
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 1.8e-95 353.2 268 62.3
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 1.8e-95 353.2 275 57.5
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 3.1e-95 352.4 277 59.6
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 6.9e-95 351.3 265 62.3
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 9.0e-95 350.9 249 65.1
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 9.0e-95 350.9 268 62.3
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 9.0e-95 350.9 275 61.8
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 2.0e-94 349.7 267 60.7
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 2.0e-94 349.7 268 61.9
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 2.0e-94 349.7 270 60.7
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 4.5e-94 348.6 299 55.5
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 4.5e-94 348.6 270 62.2
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 4.5e-94 348.6 275 58.5
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 5.9e-94 348.2 268 61.6
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 7.7e-94 347.8 268 60.4
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 2.2e-93 346.3 273 59.7
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 2.2e-93 346.3 268 60.8
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 2.9e-93 345.9 269 61.0
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 2.9e-93 345.9 255 62.4
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 6.5e-93 344.7 284 57.0
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 6.5e-93 344.7 268 61.2
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 1.1e-92 344.0 279 59.1
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 1.4e-92 343.6 268 60.4
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 1.4e-92 343.6 270 60.7
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 2.5e-92 342.8 233 66.1
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 5.5e-92 341.7 270 61.1
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 7.2e-92 341.3 284 58.5
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 7.2e-92 341.3 306 53.3
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 9.4e-92 340.9 265 60.8
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 1.6e-91 340.1 284 57.4
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 1.6e-91 340.1 270 60.0
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 1.6e-91 340.1 270 60.0
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 1.6e-91 340.1 270 60.0
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 1.6e-91 340.1 265 60.4
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 1.6e-91 340.1 284 58.1
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 2.7e-91 339.3 263 60.1
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 2.7e-91 339.3 263 60.1
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 2.7e-91 339.3 263 60.1
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 2.7e-91 339.3 276 58.7
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 3.6e-91 339.0 267 59.9
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 7.9e-91 337.8 269 59.5
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 1.8e-90 336.7 282 57.4
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 3.9e-90 335.5 284 57.0
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 5.1e-90 335.1 279 57.3
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 1.1e-89 334.0 247 61.5
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 1.5e-89 333.6 282 56.4
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 1.5e-89 333.6 284 56.7
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 7.4e-89 331.3 297 55.9
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 1.3e-88 330.5 246 63.4
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 2.8e-88 329.3 259 60.2
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 4.8e-88 328.6 247 63.2
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 6.3e-88 328.2 256 59.8
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 1.8e-87 326.6 323 51.7
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 4.1e-87 325.5 253 60.1
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 6.9e-87 324.7 251 58.6
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 9.1e-87 324.3 258 57.8
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 2.9e-85 319.3 246 60.2
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 3.8e-85 318.9 257 58.0
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 8.5e-85 317.8 246 62.2
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 1.2e-83 313.9 267 59.2
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 1.6e-83 313.5 227 63.4
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 6.7e-82 308.1 256 57.0
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 3.3e-81 305.8 266 52.6
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 6.3e-80 301.6 219 63.5
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 8.2e-80 301.2 271 54.6
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 2.6e-78 296.2 275 53.8
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 3.5e-78 295.8 208 66.3
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 4.5e-78 295.4 239 55.6
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 2.6e-73 279.6 226 59.3
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 4.4e-73 278.9 228 58.8
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 8.2e-72 274.6 218 61.0
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 1.8e-71 273.5 226 57.5
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 3.5e-70 269.2 295 47.1
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 2.5e-68 263.1 292 47.9
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 2.5e-68 263.1 267 49.8
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 3.2e-68 262.7 228 56.6
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 1.2e-62 244.2 216 56.0
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 5.4e-55 218.8 217 53.0
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 5.9e-54 215.3 183 55.7
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 5.5e-52 208.8 173 56.6
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 1.8e-50 203.8 167 57.5
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 4.0e-50 202.6 160 55.6
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 2.7e-46 189.9 163 53.4
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 2.9e-40 169.9 229 41.9
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.4e-39 167.5 203 42.9
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.2e-39 166.4 203 42.4
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 3.9e-37 159.5 175 48.0
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 5.0e-37 159.1 203 40.9
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 8.6e-37 158.3 203 41.4
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 1.2e-35 154.5 108 61.1
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 3.6e-35 152.9 164 50.6
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 2.3e-34 150.2 100 67.0
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 3.4e-33 146.4 85 77.6
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 3.7e-32 142.9 203 37.9
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.9e-31 140.6 169 43.2
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 1.6e-27 127.5 97 64.9
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.1e-26 124.8 203 33.5
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 4.4e-25 119.4 141 46.1
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 4.4e-25 119.4 210 31.4
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 7.6e-25 118.6 192 32.8
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 9.9e-25 118.2 193 33.7
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 3.7e-24 116.3 77 66.2
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.4e-23 113.6 203 33.0
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 9.2e-23 111.7 87 57.5
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 6.0e-22 109.0 95 57.9
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.3e-20 102.8 203 30.0
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 6.8e-18 95.5 164 37.2
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 2.2e-16 90.5 179 31.3
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 2.3e-13 80.5 203 26.1
Pp3c4_24930 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.4e-10 70.5 109 34.9


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