Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 6.2e-138 494.2 263 100.0
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 3.4e-67 259.2 253 51.4
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 6.3e-66 255.0 253 52.6
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 8.3e-66 254.6 253 54.5
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 1.1e-65 254.2 253 53.8
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 2.4e-65 253.1 252 53.2
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 3.1e-65 252.7 269 51.3
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 3.1e-65 252.7 253 53.8
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 9.2e-65 251.1 253 50.2
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 1.2e-64 250.8 253 50.2
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 1.6e-64 250.4 253 52.2
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 1.6e-64 250.4 269 50.9
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 2.7e-64 249.6 253 51.0
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 3.5e-64 249.2 251 53.8
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 4.5e-64 248.8 253 52.2
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 4.5e-64 248.8 253 51.4
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 1.3e-63 247.3 270 50.4
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 1.7e-63 246.9 253 50.2
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 1.7e-63 246.9 253 53.0
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 1.7e-63 246.9 253 51.8
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 2.9e-63 246.1 253 52.6
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 3.8e-63 245.7 253 51.4
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 3.8e-63 245.7 253 52.2
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 1.1e-62 244.2 253 52.2
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 1.9e-62 243.4 251 52.2
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 1.9e-62 243.4 253 51.4
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 2.5e-62 243.0 253 53.4
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 2.5e-62 243.0 258 51.9
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 3.3e-62 242.7 254 50.8
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 3.3e-62 242.7 253 49.4
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 4.3e-62 242.3 255 49.8
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 4.3e-62 242.3 253 52.6
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 5.6e-62 241.9 255 48.6
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 5.6e-62 241.9 252 54.4
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 7.3e-62 241.5 252 51.2
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 9.5e-62 241.1 253 48.6
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 9.5e-62 241.1 253 51.0
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 1.2e-61 240.7 253 48.2
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.2e-61 240.7 254 50.4
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 1.2e-61 240.7 253 50.2
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 1.2e-61 240.7 253 50.6
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 1.2e-61 240.7 252 52.8
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 2.1e-61 240.0 254 50.8
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 2.8e-61 239.6 235 54.9
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 3.6e-61 239.2 253 51.0
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 3.6e-61 239.2 262 49.2
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 3.6e-61 239.2 255 51.8
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 3.6e-61 239.2 269 48.7
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 4.7e-61 238.8 253 53.4
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 4.7e-61 238.8 253 51.4
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 8.0e-61 238.0 253 51.0
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 8.0e-61 238.0 268 49.3
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 2.3e-60 236.5 269 48.7
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 2.3e-60 236.5 253 50.6
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 2.3e-60 236.5 262 49.6
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 2.3e-60 236.5 254 52.4
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 3.0e-60 236.1 222 52.7
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 3.0e-60 236.1 253 50.2
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 3.0e-60 236.1 254 52.4
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 4.0e-60 235.7 254 52.0
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 5.2e-60 235.3 255 48.2
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 6.8e-60 235.0 252 51.6
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 6.8e-60 235.0 252 48.4
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 1.2e-59 234.2 253 51.4
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 1.2e-59 234.2 230 53.0
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 3.4e-59 232.6 249 48.2
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 1.7e-58 230.3 254 50.4
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 1.7e-58 230.3 254 50.0
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 1.7e-58 230.3 256 50.0
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 2.2e-58 229.9 253 51.4
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 3.7e-58 229.2 250 48.8
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 8.3e-58 228.0 224 49.1
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 8.3e-58 228.0 253 48.2
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 1.1e-57 227.6 255 47.1
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 1.4e-57 227.3 257 48.6
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 2.4e-57 226.5 260 47.3
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 3.2e-57 226.1 268 49.3
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 2.0e-56 223.4 257 47.1
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 6.0e-56 221.9 225 51.1
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 7.8e-56 221.5 234 48.3
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 1.0e-55 221.1 256 48.0
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 1.3e-55 220.7 240 47.9
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 2.3e-55 219.9 254 47.2
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 3.9e-55 219.2 245 49.8
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 6.6e-55 218.4 257 44.7
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 8.6e-55 218.0 223 50.7
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 8.6e-55 218.0 223 50.7
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 1.5e-54 217.2 254 45.7
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 1.9e-54 216.9 256 48.4
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 5.6e-54 215.3 256 46.5
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 7.3e-54 214.9 273 46.2
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.2e-53 214.2 256 46.9
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 2.1e-53 213.4 273 45.8
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 2.1e-53 213.4 255 45.1
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 4.7e-53 212.2 275 44.4
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 4.7e-53 212.2 256 48.0
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 8.9e-52 208.0 256 47.7
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 1.2e-51 207.6 253 45.1
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 7.5e-51 204.9 344 36.0
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 2.9e-50 203.0 225 48.4
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 4.6e-48 195.7 244 45.1
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.7e-47 193.7 253 44.7
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 9.5e-46 188.0 175 54.3
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 1.8e-44 183.7 187 50.3
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 3.1e-44 183.0 187 49.2
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 1.3e-42 177.6 254 43.3
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.7e-42 177.2 171 55.0
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 2.5e-38 163.3 185 49.7
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 3.1e-36 156.4 259 39.4
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 5.2e-36 155.6 158 53.8
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 3.4e-35 152.9 251 39.4
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 8.4e-34 148.3 156 52.6
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 3.1e-28 129.8 219 37.0
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 6.4e-26 122.1 171 40.4
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 9.3e-25 118.2 130 46.9
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 4.8e-21 105.9 122 45.1
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 1.4e-20 104.4 118 50.0
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 1.6e-13 80.9 119 36.1
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 4.0e-12 76.3 62 62.9
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 1.2e-11 74.7 100 38.0
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 3.4e-11 73.2 90 48.9
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 1.3e-10 71.2 82 47.6
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 4.6e-08 62.8 114 39.5
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 8.7e-07 58.5 86 41.9


User provided reference genes

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