Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO351G0109 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 0.0e+00 1599.3 811 100.0
SMO351G0158 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 0.0e+00 1140.9 1031 64.6
Mapoly0061s0124 Marchantia polymorpha HOM05D005691 ORTHO05D007096 2.3e-130 470.7 1048 34.1
SEGI_38606 Sequoiadendron giganteum HOM05D005691 ORTHO05D007096 1.7e-117 427.9 1077 32.0
MBI16_g26390_MAGBIO Magnolia biondii HOM05D005691 ORTHO05D007096 9.9e-110 402.1 1065 32.1
ATR1149G135 Amborella trichopoda HOM05D005691 ORTHO05D007096 9.3e-108 395.6 1072 31.3
Pp3c21_14430 Physcomitrium patens HOM05D005691 ORTHO05D007096 3.3e-105 387.1 1002 30.2
MSTRG.6644 Avicennia marina HOM05D005691 ORTHO05D007096 6.0e-99 366.3 1053 29.2
Gohir.A07G191000 Gossypium hirsutum HOM05D005691 ORTHO05D007096 3.0e-98 364.0 1068 29.6
Atru.chr6.3368 Acer truncatum HOM05D005691 ORTHO05D007096 3.9e-98 363.6 1048 30.2
AagrBONN_evm.TU.Sc2ySwM_362.2878 Anthoceros agrestis HOM05D005691 ORTHO05D007096 1.5e-97 361.7 1026 31.5
MD17G1113600 Malus domestica HOM05D005691 ORTHO05D007096 1.5e-97 361.7 1066 29.5
Gohir.D07G197400 Gossypium hirsutum HOM05D005691 ORTHO05D007096 9.6e-97 359.0 1068 29.6
SalBow7G1588 Salvia bowleyana HOM05D005691 ORTHO05D007096 9.6e-97 359.0 1047 29.8
FAN14G0170 Fragaria x ananassa HOM05D005691 ORTHO05D007096 4.8e-96 356.7 1084 29.0
Actinidia21444 Actinidia chinensis HOM05D005691 ORTHO05D007096 6.2e-96 356.3 1041 29.0
FvH4_6g40930 Fragaria vesca HOM05D005691 ORTHO05D007096 6.2e-96 356.3 1084 29.0
FAN09G3499 Fragaria x ananassa HOM05D005691 ORTHO05D007096 4.0e-95 353.6 1084 29.0
Gorai.001G221100 Gossypium raimondii HOM05D005691 ORTHO05D007096 6.9e-95 352.8 1068 29.4
SGA_v2.0_scaffold73G24511 Striga asiatica HOM05D005691 ORTHO05D007096 1.2e-94 352.1 1060 29.2
Manes.12G061100 Manihot esculenta HOM05D005691 ORTHO05D007096 1.5e-94 351.7 1073 29.3
Thecc.01G191500 Theobroma cacao HOM05D005691 ORTHO05D007096 1.5e-94 351.7 1055 29.5
Ciclev10014054m.g Citrus clementina HOM05D005691 ORTHO05D007096 2.6e-94 350.9 1059 29.2
FAN05G1189 Fragaria x ananassa HOM05D005691 ORTHO05D007096 4.5e-94 350.1 1084 29.0
Cc00_g04460 Coffea canephora HOM05D005691 ORTHO05D007096 1.3e-93 348.6 1064 28.3
RcHm_v2.0_Chr2g0156551 Rosa chinensis HOM05D005691 ORTHO05D007096 1.3e-93 348.6 1069 29.4
Migut.M00032 Erythranthe guttata HOM05D005691 ORTHO05D007096 3.8e-93 347.1 1061 29.3
Aqoxy4G02218 Aquilegia oxysepala HOM05D005691 ORTHO05D007096 6.5e-93 346.3 1067 28.9
CSS0009966 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 1.1e-92 345.5 1075 28.0
CSS0040753 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 2.5e-92 344.4 1075 27.9
Eucgr.A01048 Eucalyptus grandis HOM05D005691 ORTHO05D007096 3.2e-92 344.0 1057 30.1
PGSC0003DMG400006150 Solanum tuberosum HOM05D005691 ORTHO05D007096 4.2e-92 343.6 1044 28.7
Prupe.3G200800 Prunus persica HOM05D005691 ORTHO05D007096 5.5e-92 343.2 1086 29.2
TWI18G1215 Tripterygium wilfordii HOM05D005691 ORTHO05D007096 5.5e-92 343.2 1045 28.9
ClCG02G002780 Citrullus lanatus HOM05D005691 ORTHO05D007096 1.2e-91 342.0 1088 29.2
Sopen07g024300 Solanum pennellii HOM05D005691 ORTHO05D007096 2.1e-91 341.3 1048 28.9
Hund01594 Selenicereus undatus HOM05D005691 ORTHO05D007096 2.7e-91 340.9 1082 27.7
Haze_12684 Corylus avellana HOM05D005691 ORTHO05D007096 7.9e-91 339.3 1073 28.8
Nitab4.5_0009877g0010 Nicotiana tabacum HOM05D005691 ORTHO05D007096 7.9e-91 339.3 1046 28.6
FAN02G1659 Fragaria x ananassa HOM05D005691 ORTHO05D007096 1.0e-90 339.0 1099 28.3
Potri.002G221300 Populus trichocarpa HOM05D005691 ORTHO05D007096 1.3e-90 338.6 1069 28.4
Nitab4.5_0000441g0080 Nicotiana tabacum HOM05D005691 ORTHO05D007096 1.8e-90 338.2 1042 28.9
Sc21g0000790 Simmondsia chinensis HOM05D005691 ORTHO05D007096 3.9e-90 337.0 1070 29.3
Nn1g07449 Nelumbo nucifera HOM05D005691 ORTHO05D007096 5.1e-90 336.7 1080 29.0
PSO675G5893 Papaver somniferum HOM05D005691 ORTHO05D007096 5.1e-90 336.7 1064 28.2
MELO3C024202.2 Cucumis melo HOM05D005691 ORTHO05D007096 8.7e-90 335.9 1068 28.7
TPR.G1235 Trifolium pratense HOM05D005691 ORTHO05D007096 3.3e-89 334.0 1059 28.5
vmacro09398 Vaccinium macrocarpon HOM05D005691 ORTHO05D007096 4.3e-89 333.6 1110 27.6
CsaV3_7G002600 Cucumis sativus L. HOM05D005691 ORTHO05D007096 5.7e-89 333.2 1069 28.3
CAN.G854.9 Capsicum annuum HOM05D005691 ORTHO05D007096 7.4e-89 332.8 1057 28.9
HanXRQChr03g0075241 Helianthus annuus HOM05D005691 ORTHO05D007096 7.4e-89 332.8 1056 29.1
Psat2g005000 Pisum sativum HOM05D005691 ORTHO05D007096 1.6e-88 331.6 1074 28.1
arahy.Tifrunner.gnm1.ann1.2CK2M8 Arachis hypogaea HOM05D005691 ORTHO05D007096 6.2e-88 329.7 1060 28.4
Peaxi162Scf00776g00233 Petunia axillaris HOM05D005691 ORTHO05D007096 8.2e-88 329.3 1065 28.4
Zm00001eb399630 Zea mays HOM05D005691 ORTHO05D007096 8.2e-88 329.3 1065 28.8
CANSAT64G0049 Cannabis sativa HOM05D005691 ORTHO05D007096 1.1e-87 328.9 1051 28.3
Phvul.008G284900 Phaseolus vulgaris HOM05D005691 ORTHO05D007096 1.1e-87 328.9 1070 27.9
Sed0003649 Sechium edule HOM05D005691 ORTHO05D007096 3.1e-87 327.4 1089 27.8
arahy.Tifrunner.gnm1.ann1.5BD1HA Arachis hypogaea HOM05D005691 ORTHO05D007096 5.3e-87 326.6 1060 28.3
DCAR_019708 Daucus carota HOM05D005691 ORTHO05D007096 5.3e-87 326.6 1041 28.4
Lj8A134T75 Lonicera japonica HOM05D005691 ORTHO05D007096 6.9e-87 326.2 1067 27.7
LjContig00081g0016683 Lotus japonicus HOM05D005691 ORTHO05D007096 1.5e-86 325.1 1065 28.1
Medtr5g097260 Medicago truncatula HOM05D005691 ORTHO05D007096 2.0e-86 324.7 1058 27.9
Ca_06452_v3 Cicer arietinum L. HOM05D005691 ORTHO05D007096 2.6e-86 324.3 1063 27.8
TAR626G1898 Trochodendron aralioides HOM05D005691 ORTHO05D007096 2.6e-86 324.3 914 30.4
THA.LOC104815358 Tarenaya hassleriana HOM05D005691 ORTHO05D007096 1.0e-85 322.4 1065 28.3
AL3G42730 Arabidopsis lyrata HOM05D005691 ORTHO05D007096 1.7e-85 321.6 1067 28.1
CiPaw.03G279200 Carya illinoinensis HOM05D005691 ORTHO05D007096 2.2e-85 321.2 1065 27.6
Hma1.2p1_0133F.1_g061380 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 2.9e-85 320.9 1059 27.8
VMungo0647G0393 Vigna mungo HOM05D005691 ORTHO05D007096 2.9e-85 320.9 1056 28.0
AUR62015058 Chenopodium quinoa HOM05D005691 ORTHO05D007096 1.1e-84 318.9 1063 28.0
Oeu029977.1 Olea europaea HOM05D005691 ORTHO05D007096 1.1e-84 318.9 986 28.8
QL08p028494 Quercus lobata HOM05D005691 ORTHO05D007096 2.5e-84 317.8 1058 27.9
PGR042G3586 Punica granatum HOM05D005691 ORTHO05D007096 1.2e-83 315.5 1069 28.4
CARHR103010 Cardamine hirsuta HOM05D005691 ORTHO05D007096 2.1e-83 314.7 1069 28.2
AUR62017514 Chenopodium quinoa HOM05D005691 ORTHO05D007096 2.1e-83 314.7 1064 27.8
ECA240G2675 Erigeron canadensis HOM05D005691 ORTHO05D007096 3.5e-83 313.9 1057 27.9
Glyma.14G008200 Glycine max HOM05D005691 ORTHO05D007096 6.1e-83 313.2 1037 27.9
Thhalv10003521m.g Eutrema salsugineum HOM05D005691 ORTHO05D007096 1.3e-82 312.0 1068 28.2
Glyma.02G305200 Glycine max HOM05D005691 ORTHO05D007096 1.8e-82 311.6 1037 27.3
Sp3g23610 Schrenkiella parvula HOM05D005691 ORTHO05D007096 5.1e-82 310.1 1060 28.1
Sabra02G0169100 Salix brachista HOM05D005691 ORTHO05D007096 6.7e-82 309.7 1112 26.8
Lalb_Chr10g0107611 Lupinus albus HOM05D005691 ORTHO05D007096 3.3e-81 307.4 1055 27.9
GSVIVG01030051001 Vitis vinifera HOM05D005691 ORTHO05D007096 7.4e-81 306.2 1002 27.8
EL10Ac9g22718 Beta vulgaris HOM05D005691 ORTHO05D007096 9.7e-81 305.8 1066 26.6
Os03g0225500 Oryza sativa ssp. japonica HOM05D005691 ORTHO05D007096 4.8e-80 303.5 1066 26.5
Rhsim04G0038700 Rhododendron simsii HOM05D005691 ORTHO05D007096 8.2e-80 302.8 599 35.4
BcaB06g26838 Brassica carinata HOM05D005691 ORTHO05D007096 5.3e-79 300.1 1068 28.1
BcaB08g34496 Brassica carinata HOM05D005691 ORTHO05D007096 5.3e-79 300.1 1054 27.0
Carub.0003s2665 Capsella rubella HOM05D005691 ORTHO05D007096 5.3e-79 300.1 1063 27.4
BraA03t13590Z Brassica rapa HOM05D005691 ORTHO05D007096 2.6e-78 297.7 1052 27.4
A03p44570 Brassica napus HOM05D005691 ORTHO05D007096 4.5e-78 297.0 1052 27.5
C03p55370 Brassica napus HOM05D005691 ORTHO05D007096 2.2e-77 294.7 1053 27.4
Lsat_1_v5_gn_9_104801 Lactuca sativa HOM05D005691 ORTHO05D007096 6.5e-77 293.1 1029 27.5
Dinv07866 Davidia involucrata HOM05D005691 ORTHO05D007096 9.4e-76 289.3 960 28.2
BcaC01g03178 Brassica carinata HOM05D005691 ORTHO05D007096 1.6e-75 288.5 1053 26.9
BolC3t17809H Brassica oleracea HOM05D005691 ORTHO05D007096 1.6e-75 288.5 1053 26.9
AT2G05120 Arabidopsis thaliana HOM05D005691 ORTHO05D007096 2.1e-75 288.1 979 27.4
Hma1.2p1_0133F.1_g061370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 6.1e-75 286.6 607 33.1
Solyc07g047860.4 Solanum lycopersicum HOM05D005691 ORTHO05D007096 1.6e-67 261.9 779 28.4
SGA_v2.0_scaffold292G47412 Striga asiatica HOM05D005691 ORTHO05D007096 6.1e-67 260.0 584 33.9
SHI10144 Sapria himalayana HOM05D005691 ORTHO05D007096 3.0e-66 257.7 1081 26.1
SGA_v2.0_scaffold292G47401 Striga asiatica HOM05D005691 ORTHO05D007096 3.9e-66 257.3 598 32.6
CDE04G3337 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 3.7e-64 250.8 504 33.1
BcaC06g35896 Brassica carinata HOM05D005691 ORTHO05D007096 4.0e-50 204.1 541 32.0
unitig_746.g26642 Utricularia gibba HOM05D005691 ORTHO05D007096 1.1e-47 196.1 923 25.2
CBR_g39814 Chara braunii HOM05D005691 ORTHO05D007096 1.3e-45 189.1 1137 21.6
HPP92_000880 Vanilla planifolia HOM05D005691 ORTHO05D007096 9.2e-31 139.8 388 30.2
Cpa.g.sc211.12 Carica papaya HOM05D005691 ORTHO05D007096 1.3e-24 119.4 143 43.4
COL.COLO4_09229 Corchorus olitorius HOM05D005691 ORTHO05D007096 2.4e-23 115.2 243 33.3
COL.COLO4_09230 Corchorus olitorius HOM05D005691 ORTHO05D007096 1.2e-22 112.8 242 36.4
HPP92_000881 Vanilla planifolia HOM05D005691 ORTHO05D007096 3.0e-21 108.2 254 31.9
Cpa.g.sc211.9 Carica papaya HOM05D005691 ORTHO05D007096 3.3e-20 104.8 239 33.5
CDE04G1592 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 3.3e-20 104.8 255 31.0
C07p09910 Brassica napus HOM05D005691 ORTHO05D007096 2.9e-16 91.7 321 30.8
Hma1.2p1_1825F.1_g304370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 1.7e-13 82.4 181 33.7
Hma1.2p1_0133F.1_g061390 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 5.6e-12 77.4 149 32.9
C07p09940 Brassica napus HOM05D005691 ORTHO05D007096 7.3e-12 77.0 98 38.8


User provided reference genes

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