Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0477 Selaginella moellendorffii HOM05D004669 ORTHO05D005767 9.0e-104 380.2 182 100.0
SMO356G0696 Selaginella moellendorffii HOM05D004669 ORTHO05D005767 4.4e-34 148.7 77 93.5
Nitab4.5_0023790g0010 Nicotiana tabacum HOM05D004669 ORTHO05D005767 2.2e-25 119.8 79 73.4
Nitab4.5_0000671g0170 Nicotiana tabacum HOM05D004669 ORTHO05D005767 8.4e-25 117.9 79 72.2
Actinidia01772 Actinidia chinensis HOM05D004669 ORTHO05D005767 3.2e-24 115.9 79 70.9
Dinv30566 Davidia involucrata HOM05D004669 ORTHO05D005767 3.2e-24 115.9 79 69.6
Migut.I00803 Erythranthe guttata HOM05D004669 ORTHO05D005767 3.2e-24 115.9 77 71.4
GSVIVG01017243001 Vitis vinifera HOM05D004669 ORTHO05D005767 3.2e-24 115.9 79 68.4
Peaxi162Scf00015g00456 Petunia axillaris HOM05D004669 ORTHO05D005767 4.2e-24 115.5 79 70.9
PGSC0003DMG400005691 Solanum tuberosum HOM05D004669 ORTHO05D005767 5.4e-24 115.2 79 72.2
MSTRG.22725 Avicennia marina HOM05D004669 ORTHO05D005767 7.1e-24 114.8 77 72.7
Solyc03g120080.4 Solanum lycopersicum HOM05D004669 ORTHO05D005767 7.1e-24 114.8 79 70.9
Sopen03g038950 Solanum pennellii HOM05D004669 ORTHO05D005767 7.1e-24 114.8 79 70.9
CAN.G438.78 Capsicum annuum HOM05D004669 ORTHO05D005767 9.3e-24 114.4 83 69.9
PSO541G6522 Papaver somniferum HOM05D004669 ORTHO05D005767 9.3e-24 114.4 79 69.6
Rhsim08G0216600 Rhododendron simsii HOM05D004669 ORTHO05D005767 9.3e-24 114.4 79 69.6
Aqoxy7G02078 Aquilegia oxysepala HOM05D004669 ORTHO05D005767 1.2e-23 114.0 79 68.4
vmacro18956 Vaccinium macrocarpon HOM05D004669 ORTHO05D005767 1.2e-23 114.0 79 68.4
ATR0705G066 Amborella trichopoda HOM05D004669 ORTHO05D005767 1.6e-23 113.6 79 68.4
Cc04_g03970 Coffea canephora HOM05D004669 ORTHO05D005767 1.6e-23 113.6 77 70.1
Oeu052287.2 Olea europaea HOM05D004669 ORTHO05D005767 1.6e-23 113.6 77 68.8
PSO675G6139 Papaver somniferum HOM05D004669 ORTHO05D005767 1.6e-23 113.6 79 69.6
PSO832G2238 Papaver somniferum HOM05D004669 ORTHO05D005767 1.6e-23 113.6 79 69.6
PSO832G4299 Papaver somniferum HOM05D004669 ORTHO05D005767 1.6e-23 113.6 79 69.6
SalBow2G0244 Salvia bowleyana HOM05D004669 ORTHO05D005767 1.6e-23 113.6 79 70.9
TAR636G0609 Trochodendron aralioides HOM05D004669 ORTHO05D005767 2.1e-23 113.2 79 65.8
ECA038G0001 Erigeron canadensis HOM05D004669 ORTHO05D005767 2.7e-23 112.8 79 67.1
ECA247G1145 Erigeron canadensis HOM05D004669 ORTHO05D005767 2.7e-23 112.8 79 67.1
ECA247G3964 Erigeron canadensis HOM05D004669 ORTHO05D005767 2.7e-23 112.8 79 67.1
Eucgr.J03040 Eucalyptus grandis HOM05D004669 ORTHO05D005767 3.5e-23 112.5 79 70.9
Lsat_1_v5_gn_1_33541 Lactuca sativa HOM05D004669 ORTHO05D005767 4.6e-23 112.1 79 68.4
Potri.001G173500 Populus trichocarpa HOM05D004669 ORTHO05D005767 4.6e-23 112.1 79 69.6
TWI12G0769 Tripterygium wilfordii HOM05D004669 ORTHO05D005767 4.6e-23 112.1 79 68.4
Ah.08g209920 Amaranthus hybridus HOM05D004669 ORTHO05D005767 6.0e-23 111.7 79 68.4
Manes.11G052400 Manihot esculenta HOM05D004669 ORTHO05D005767 7.8e-23 111.3 79 68.4
HanXRQChr04g0096711 Helianthus annuus HOM05D004669 ORTHO05D005767 1.0e-22 110.9 79 69.6
HanXRQChr04g0097171 Helianthus annuus HOM05D004669 ORTHO05D005767 1.0e-22 110.9 79 69.6
MD17G1203900 Malus domestica HOM05D004669 ORTHO05D005767 1.0e-22 110.9 79 65.8
Potri.003G060500 Populus trichocarpa HOM05D004669 ORTHO05D005767 1.0e-22 110.9 79 69.6
TAR627G0296 Trochodendron aralioides HOM05D004669 ORTHO05D005767 1.0e-22 110.9 79 64.6
HPP92_024437 Vanilla planifolia HOM05D004669 ORTHO05D005767 1.0e-22 110.9 79 64.6
EL10Ac9g21952 Beta vulgaris HOM05D004669 ORTHO05D005767 1.7e-22 110.2 79 65.8
AUR62011570 Chenopodium quinoa HOM05D004669 ORTHO05D005767 1.7e-22 110.2 79 65.8
AUR62016387 Chenopodium quinoa HOM05D004669 ORTHO05D005767 1.7e-22 110.2 79 65.8
ClCG06G013830 Citrullus lanatus HOM05D004669 ORTHO05D005767 2.3e-22 109.8 83 65.1
MBI04_g45208_MAGBIO Magnolia biondii HOM05D004669 ORTHO05D005767 2.3e-22 109.8 79 63.3
SEGI_00336 Sequoiadendron giganteum HOM05D004669 ORTHO05D005767 2.3e-22 109.8 77 66.2
SGA_v2.0_scaffold5G02661 Striga asiatica HOM05D004669 ORTHO05D005767 2.3e-22 109.8 77 67.5
ClCG07G012820 Citrullus lanatus HOM05D004669 ORTHO05D005767 3.0e-22 109.4 79 67.1
Lj5A68G59 Lonicera japonica HOM05D004669 ORTHO05D005767 3.0e-22 109.4 79 65.8
Sabra01G0138300 Salix brachista HOM05D004669 ORTHO05D005767 3.0e-22 109.4 79 68.4
MELO3C017903.2 Cucumis melo HOM05D004669 ORTHO05D005767 3.9e-22 109.0 79 67.1
CsaV3_4G001370 Cucumis sativus L. HOM05D004669 ORTHO05D005767 3.9e-22 109.0 79 67.1
Hund06583 Selenicereus undatus HOM05D004669 ORTHO05D005767 3.9e-22 109.0 79 65.8
TAR627G0037 Trochodendron aralioides HOM05D004669 ORTHO05D005767 3.9e-22 109.0 79 62.0
Cpa.g.sc10.221 Carica papaya HOM05D004669 ORTHO05D005767 5.1e-22 108.6 79 68.4
FvH4_6g30400 Fragaria vesca HOM05D004669 ORTHO05D005767 5.1e-22 108.6 82 62.2
FAN02G3057 Fragaria x ananassa HOM05D004669 ORTHO05D005767 5.1e-22 108.6 82 62.2
FAN05G0230 Fragaria x ananassa HOM05D004669 ORTHO05D005767 5.1e-22 108.6 82 62.2
FAN09G4623 Fragaria x ananassa HOM05D004669 ORTHO05D005767 5.1e-22 108.6 82 62.2
FAN14G3011 Fragaria x ananassa HOM05D004669 ORTHO05D005767 5.1e-22 108.6 82 62.2
PGR031G2027 Punica granatum HOM05D004669 ORTHO05D005767 5.1e-22 108.6 79 64.6
QL05p027590 Quercus lobata HOM05D004669 ORTHO05D005767 5.1e-22 108.6 79 67.1
CiPaw.02G154600 Carya illinoinensis HOM05D004669 ORTHO05D005767 6.6e-22 108.2 79 65.8
Sc12g0008880 Simmondsia chinensis HOM05D004669 ORTHO05D005767 6.6e-22 108.2 79 64.6
unitig_0.g1124 Utricularia gibba HOM05D004669 ORTHO05D005767 6.6e-22 108.2 77 68.8
Nn8g39375 Nelumbo nucifera HOM05D004669 ORTHO05D005767 1.1e-21 107.5 79 63.3
Medtr7g076230 Medicago truncatula HOM05D004669 ORTHO05D005767 1.5e-21 107.1 79 65.8
Prupe.3G078900 Prunus persica HOM05D004669 ORTHO05D005767 1.5e-21 107.1 79 64.6
RcHm_v2.0_Chr2g0136751 Rosa chinensis HOM05D004669 ORTHO05D005767 1.5e-21 107.1 79 62.0
Thecc.06G074100 Theobroma cacao HOM05D004669 ORTHO05D005767 1.5e-21 107.1 79 62.0
Cfa002013 Carpinus fangiana HOM05D004669 ORTHO05D005767 1.9e-21 106.7 79 65.8
LjContig00155g0017542 Lotus japonicus HOM05D004669 ORTHO05D005767 1.9e-21 106.7 85 58.8
CDE04G1486 Ceratophyllum demersum HOM05D004669 ORTHO05D005767 2.5e-21 106.3 88 60.2
Psat0s4195g0120 Pisum sativum HOM05D004669 ORTHO05D005767 2.5e-21 106.3 77 64.9
CSS0009653 Camellia sinensis var. sinensis HOM05D004669 ORTHO05D005767 4.3e-21 105.5 79 64.6
CANSAT56G1977 Cannabis sativa HOM05D004669 ORTHO05D005767 4.3e-21 105.5 79 63.3
Sed0001284 Sechium edule HOM05D004669 ORTHO05D005767 4.3e-21 105.5 82 63.4
Sed0010016 Sechium edule HOM05D004669 ORTHO05D005767 4.3e-21 105.5 82 63.4
Ciclev10024861m.g Citrus clementina HOM05D004669 ORTHO05D005767 7.3e-21 104.8 79 64.6
Phvul.009G217600 Phaseolus vulgaris HOM05D004669 ORTHO05D005767 9.6e-21 104.4 79 63.3
Carub.0001s1524 Capsella rubella HOM05D004669 ORTHO05D005767 1.3e-20 104.0 79 65.8
AL1G27560 Arabidopsis lyrata HOM05D004669 ORTHO05D005767 1.6e-20 103.6 80 63.8
Gohir.D09G084800 Gossypium hirsutum HOM05D004669 ORTHO05D005767 2.1e-20 103.2 79 62.0
Gorai.006G100800 Gossypium raimondii HOM05D004669 ORTHO05D005767 2.1e-20 103.2 79 62.0
Lalb_Chr11g0073441 Lupinus albus HOM05D004669 ORTHO05D005767 2.1e-20 103.2 79 64.6
VMungo1309G3168 Vigna mungo HOM05D004669 ORTHO05D005767 2.1e-20 103.2 79 62.0
Haze_16509 Corylus avellana HOM05D004669 ORTHO05D005767 2.8e-20 102.8 79 64.6
Duzib192G0063 Durio zibethinus HOM05D004669 ORTHO05D005767 2.8e-20 102.8 79 60.8
arahy.Tifrunner.gnm1.ann1.DS860L Arachis hypogaea HOM05D004669 ORTHO05D005767 3.6e-20 102.4 79 64.6
arahy.Tifrunner.gnm1.ann1.L4R828 Arachis hypogaea HOM05D004669 ORTHO05D005767 3.6e-20 102.4 79 64.6
CARHR016000 Cardamine hirsuta HOM05D004669 ORTHO05D005767 3.6e-20 102.4 80 62.5
Sed0027531 Sechium edule HOM05D004669 ORTHO05D005767 3.6e-20 102.4 79 63.3
AT1G15440 Arabidopsis thaliana HOM05D004669 ORTHO05D005767 4.8e-20 102.1 79 63.3
COL.COLO4_12887 Corchorus olitorius HOM05D004669 ORTHO05D005767 4.8e-20 102.1 71 67.6
Aa31LG7G190 Aethionema arabicum HOM05D004669 ORTHO05D005767 6.2e-20 101.7 79 63.3
A06p11500 Brassica napus HOM05D000746 ORTHO05D005767 8.1e-20 101.3 77 64.9
C05p13620 Brassica napus HOM05D004669 ORTHO05D005767 8.1e-20 101.3 77 64.9
BolC5t30098H Brassica oleracea HOM05D004669 ORTHO05D005767 8.1e-20 101.3 77 64.9
BraA06t24327Z Brassica rapa HOM05D000746 ORTHO05D005767 8.1e-20 101.3 77 64.9
Ca_02514_v3 Cicer arietinum L. HOM05D004669 ORTHO05D005767 8.1e-20 101.3 79 63.3
Glyma.15G193000 Glycine max HOM05D004669 ORTHO05D005767 8.1e-20 101.3 79 63.3
BcaB03g13059 Brassica carinata HOM05D004669 ORTHO05D005767 1.1e-19 100.9 79 63.3
A08p31560 Brassica napus HOM05D004669 ORTHO05D005767 1.1e-19 100.9 79 63.3
BraA08t35078Z Brassica rapa HOM05D004669 ORTHO05D005767 1.1e-19 100.9 79 63.3
THA.LOC104812492 Tarenaya hassleriana HOM05D004669 ORTHO05D005767 1.1e-19 100.9 79 62.0
TPR.G37778 Trifolium pratense HOM05D004669 ORTHO05D005767 1.1e-19 100.9 79 62.0
Zm00001eb293800 Zea mays HOM05D004669 ORTHO05D005767 1.1e-19 100.9 79 58.2
BcaC07g38791 Brassica carinata HOM05D004669 ORTHO05D005767 1.4e-19 100.5 87 62.1
C08p17210 Brassica napus HOM05D004669 ORTHO05D005767 1.4e-19 100.5 87 62.1
BolC8t49350H Brassica oleracea HOM05D004669 ORTHO05D005767 1.4e-19 100.5 87 62.1
Sp1g13810 Schrenkiella parvula HOM05D004669 ORTHO05D005767 1.4e-19 100.5 91 58.2
Sed0020458 Sechium edule HOM05D004669 ORTHO05D005767 1.8e-19 100.1 78 64.1
Glyma.09G084600 Glycine max HOM05D004669 ORTHO05D005767 3.1e-19 99.4 79 63.3
AagrBONN_evm.TU.Sc2ySwM_228.5273 Anthoceros agrestis HOM05D004669 ORTHO05D005767 4.0e-19 99.0 88 54.5
Thhalv10006752m.g Eutrema salsugineum HOM05D004669 ORTHO05D005767 4.0e-19 99.0 87 58.6
Gohir.A09G084900 Gossypium hirsutum HOM05D004669 ORTHO05D005767 1.2e-18 97.4 73 61.6
Manes.04G117100 Manihot esculenta HOM05D004669 ORTHO05D005767 1.2e-18 97.4 79 63.3
CBR_g51007 Chara braunii HOM05D004669 ORTHO05D005767 4.5e-18 95.5 67 64.2
Mapoly0001s0129 Marchantia polymorpha HOM05D004669 ORTHO05D005767 1.7e-17 93.6 72 63.9
Pp3c7_9990 Physcomitrium patens HOM05D004669 ORTHO05D005767 1.6e-15 87.0 75 57.3
ECA247G2328 Erigeron canadensis HOM05D004669 ORTHO05D005767 8.7e-14 81.3 59 64.4
Cre06.g254150 Chlamydomonas reinhardtii HOM05D004669 ORTHO05D005767 6.9e-11 71.6 67 52.2
Atru.chr1.3106 Acer truncatum HOM05D004669 ORTHO05D005767 9.0e-11 71.2 48 68.8
CDE02G1289 Ceratophyllum demersum HOM05D004669 ORTHO05D005767 9.0e-11 71.2 58 63.8
HanXRQChr04g0097231 Helianthus annuus HOM05D004669 ORTHO05D005767 7.6e-10 68.2 49 65.3
Atru.chr1.3112 Acer truncatum HOM05D004669 ORTHO05D005767 1.1e-08 64.3 47 66.0
MCO13G313 Micromonas commoda HOM05D004669 ORTHO05D005767 4.2e-08 62.4 55 52.7
Psat3g100960 Pisum sativum HOM05D004669 ORTHO05D005767 7.9e-07 58.2 46 58.7


User provided reference genes

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