Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 2.4e-156 555.4 275 100.0
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 7.2e-129 464.2 271 80.1
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 2.7e-128 462.2 272 80.1
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 3.6e-128 461.8 272 80.5
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 4.7e-128 461.5 275 79.6
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 4.7e-128 461.5 271 80.4
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 6.1e-128 461.1 271 80.1
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 8.0e-128 460.7 271 81.5
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.0e-127 460.3 271 80.4
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.4e-127 459.9 271 80.1
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 1.4e-127 459.9 271 80.8
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 1.4e-127 459.9 272 79.8
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 1.8e-127 459.5 271 81.9
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 1.8e-127 459.5 271 79.7
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 1.8e-127 459.5 271 81.2
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 2.3e-127 459.1 271 80.1
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 2.3e-127 459.1 271 79.7
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 5.2e-127 458.0 271 80.8
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 5.2e-127 458.0 271 80.1
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 8.8e-127 457.2 271 80.4
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 1.1e-126 456.8 271 79.3
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 1.5e-126 456.4 271 80.1
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 1.5e-126 456.4 268 80.6
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 2.0e-126 456.1 271 80.1
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 2.0e-126 456.1 271 80.1
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 2.6e-126 455.7 271 80.8
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 2.6e-126 455.7 270 80.7
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 2.6e-126 455.7 273 80.6
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 2.6e-126 455.7 271 80.8
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 3.3e-126 455.3 271 80.8
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 3.3e-126 455.3 271 80.1
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 4.4e-126 454.9 271 80.4
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 4.4e-126 454.9 268 81.7
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 4.4e-126 454.9 271 79.7
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 5.7e-126 454.5 271 80.4
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 5.7e-126 454.5 271 80.8
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 5.7e-126 454.5 271 80.1
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 5.7e-126 454.5 271 80.1
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 5.7e-126 454.5 271 81.2
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 5.7e-126 454.5 271 80.8
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 5.7e-126 454.5 271 79.7
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 5.7e-126 454.5 270 80.4
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 7.4e-126 454.1 271 80.1
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 7.4e-126 454.1 271 80.8
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 7.4e-126 454.1 271 80.4
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 9.7e-126 453.8 271 79.3
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 9.7e-126 453.8 271 78.6
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 9.7e-126 453.8 271 80.8
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 9.7e-126 453.8 268 82.1
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 9.7e-126 453.8 271 79.0
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 9.7e-126 453.8 271 79.7
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 9.7e-126 453.8 271 80.1
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 9.7e-126 453.8 271 81.2
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 1.3e-125 453.4 268 81.3
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 1.3e-125 453.4 271 80.1
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 1.3e-125 453.4 271 79.0
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 1.7e-125 453.0 271 80.1
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 1.7e-125 453.0 271 80.1
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 1.7e-125 453.0 271 80.1
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 2.2e-125 452.6 271 79.3
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 2.2e-125 452.6 271 78.6
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 2.2e-125 452.6 266 82.0
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 2.8e-125 452.2 271 79.7
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 2.8e-125 452.2 271 79.7
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 3.7e-125 451.8 271 80.1
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 6.3e-125 451.1 268 80.6
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 6.3e-125 451.1 271 78.6
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 6.3e-125 451.1 271 78.6
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 6.3e-125 451.1 271 79.3
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 6.3e-125 451.1 268 81.7
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 8.2e-125 450.7 271 79.3
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 8.2e-125 450.7 268 81.0
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 1.1e-124 450.3 270 80.0
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 1.4e-124 449.9 268 81.7
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 1.8e-124 449.5 271 79.7
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 2.4e-124 449.1 271 79.0
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 2.4e-124 449.1 271 79.0
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 2.4e-124 449.1 271 79.3
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 4.1e-124 448.4 268 80.2
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 5.3e-124 448.0 268 80.2
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 7.0e-124 447.6 271 78.6
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 9.1e-124 447.2 273 77.7
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 9.1e-124 447.2 278 77.0
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 1.2e-123 446.8 301 73.4
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 2.0e-123 446.0 271 78.6
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 4.5e-123 444.9 276 79.0
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 5.9e-123 444.5 272 79.4
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 1.3e-122 443.4 275 78.9
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 2.2e-122 442.6 272 79.0
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 3.8e-122 441.8 271 77.1
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 8.5e-122 440.7 271 79.0
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 1.1e-121 440.3 271 79.3
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 1.9e-121 439.5 271 77.9
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 2.5e-121 439.1 271 79.0
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 2.5e-121 439.1 292 71.9
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 3.2e-121 438.7 271 78.6
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 7.2e-121 437.6 271 78.6
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 9.4e-121 437.2 254 82.3
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 4.7e-120 434.9 276 77.9
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 6.1e-120 434.5 253 81.4
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 6.1e-120 434.5 271 77.1
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 1.8e-119 433.0 253 81.8
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 4.0e-119 431.8 253 82.2
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 2.6e-118 429.1 260 78.5
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 3.4e-118 428.7 293 72.7
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 4.4e-118 428.3 254 80.3
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 7.5e-118 427.6 271 77.5
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 1.3e-117 426.8 261 76.6
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 2.8e-117 425.6 345 64.1
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 6.3e-117 424.5 253 79.4
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 8.3e-117 424.1 270 76.7
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 2.4e-116 422.5 257 80.9
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 3.1e-116 422.2 253 78.7
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 5.4e-116 421.4 253 78.7
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 7.0e-116 421.0 253 79.1
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 1.2e-115 420.2 260 77.7
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 1.2e-115 420.2 260 77.7
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 2.2e-114 416.0 253 80.2
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 2.9e-114 415.6 273 76.6
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 2.9e-114 415.6 294 71.8
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 3.8e-114 415.2 258 78.3
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 6.5e-114 414.5 253 79.8
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 2.5e-113 412.5 265 75.8
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 3.2e-113 412.1 240 81.7
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 2.1e-112 409.5 277 74.7
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 2.1e-112 409.5 277 74.7
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 8.0e-112 407.5 238 82.4
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 1.8e-111 406.4 316 66.1
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 3.0e-111 405.6 237 81.0
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 8.8e-111 404.1 237 80.6
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 9.8e-110 400.6 238 79.8
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 1.4e-108 396.7 271 72.3
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 4.1e-108 395.2 273 71.8
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 3.8e-106 388.7 227 81.9
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 1.5e-105 386.7 271 70.5
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 6.8e-103 377.9 223 80.3
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 2.6e-102 375.9 275 68.7
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 6.6e-98 361.3 217 78.3
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 5.8e-94 348.2 376 52.7
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 5.0e-90 335.1 256 66.4
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 4.3e-89 332.0 189 81.5
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 1.1e-84 317.4 188 80.9
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 8.6e-82 307.8 260 60.8
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 8.6e-82 307.8 173 83.8
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 5.2e-79 298.5 284 57.7
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 3.9e-74 282.3 173 76.3
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 7.3e-73 278.1 252 58.3
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 4.2e-68 262.3 259 54.1
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 8.7e-66 254.6 235 56.6
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.7e-61 240.4 194 63.9
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 4.2e-60 235.7 257 45.9
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 2.1e-43 180.3 133 67.7
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 2.1e-43 180.3 133 67.7
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 4.1e-39 166.0 174 53.4
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 3.8e-29 132.9 135 51.9
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 6.5e-29 132.1 125 59.2
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 5.0e-21 105.9 64 68.8
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 2.5e-20 103.6 72 72.2
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 1.2e-19 101.3 100 54.0
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 2.3e-18 97.1 88 56.8
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.3e-18 97.1 88 56.8
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 3.7e-16 89.7 53 75.5
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 6.5e-13 79.0 51 72.5
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 2.5e-12 77.0 46 76.1
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 3.7e-08 63.2 45 62.2
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 8.2e-08 62.0 90 44.4
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 8.2e-08 62.0 90 44.4
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.8e-07 60.8 39 76.9


User provided reference genes

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