Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0197 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 9.6e-53 209.9 108 100.0
SMO159G0009 Selaginella moellendorffii HOM05D006029 ORTHO05D007439 6.2e-44 180.6 108 75.0
Mapoly0101s0063 Marchantia polymorpha HOM05D006029 ORTHO05D007439 6.1e-31 137.5 109 58.7
Pp3c15_5550 Physcomitrium patens HOM05D006029 ORTHO05D007439 6.1e-31 137.5 111 54.1
AagrBONN_evm.TU.Sc2ySwM_117.3630 Anthoceros agrestis HOM05D006029 ORTHO05D007439 1.9e-29 132.5 109 50.5
CBR_g49523 Chara braunii HOM05D006029 ORTHO05D007439 6.5e-25 117.5 92 50.0
CBR_g31408 Chara braunii HOM05D006029 ORTHO05D007439 1.2e-23 113.2 71 59.2
Cre02.g102400 Chlamydomonas reinhardtii HOM05D006029 ORTHO05D007439 3.6e-23 111.7 107 46.7
MCO11G240 Micromonas commoda HOM05D006029 ORTHO05D007439 3.9e-22 108.2 109 44.0
Zm00001eb187060 Zea mays HOM05D006029 ORTHO05D007439 4.8e-20 101.3 111 42.3
Os02g0672700 Oryza sativa ssp. japonica HOM05D006029 ORTHO05D007439 1.1e-19 100.1 111 41.4
Nn1g00349 Nelumbo nucifera HOM05D006029 ORTHO05D007439 2.0e-18 95.9 113 46.0
HPP92_017871 Vanilla planifolia HOM05D006029 ORTHO05D007439 4.5e-18 94.7 111 40.5
ATR0751G147 Amborella trichopoda HOM05D006029 ORTHO05D007439 2.2e-17 92.4 109 38.5
PRCOL_00000799 Prasinoderma coloniale HOM05D006029 ORTHO05D007439 8.5e-17 90.5 71 52.1
Aqoxy4G03109 Aquilegia oxysepala HOM05D006029 ORTHO05D007439 7.2e-16 87.4 111 39.6
Lj1g0014790 Lotus japonicus HOM05D006029 ORTHO05D007439 2.1e-15 85.9 113 39.8
Lj1g0022243 Lotus japonicus HOM05D006029 ORTHO05D007439 2.1e-15 85.9 113 39.8
Psat3g005240 Pisum sativum HOM05D006029 ORTHO05D007439 2.1e-15 85.9 111 37.8
Sed0019070 Sechium edule HOM05D006029 ORTHO05D007439 2.7e-15 85.5 113 38.9
TAR374G1259 Trochodendron aralioides HOM05D006029 ORTHO05D007439 2.7e-15 85.5 113 41.6
PSO782G1905 Papaver somniferum HOM05D006029 ORTHO05D007439 4.7e-15 84.7 113 40.7
PSO782G2649 Papaver somniferum HOM05D006029 ORTHO05D007439 4.7e-15 84.7 113 40.7
PSO782G4464 Papaver somniferum HOM05D006029 ORTHO05D007439 4.7e-15 84.7 113 40.7
THA.LOC104815886 Tarenaya hassleriana HOM05D006029 ORTHO05D007439 4.7e-15 84.7 110 40.9
Cfa010653 Carpinus fangiana HOM05D006029 ORTHO05D007439 6.1e-15 84.3 113 38.1
Phvul.008G101000 Phaseolus vulgaris HOM05D006029 ORTHO05D007439 6.1e-15 84.3 113 41.6
ClCG10G013250 Citrullus lanatus HOM05D006029 ORTHO05D007439 1.0e-14 83.6 113 38.1
Cpa.g.sc96.66 Carica papaya HOM05D006029 ORTHO05D007439 1.4e-14 83.2 111 39.6
Sed0007850 Sechium edule HOM05D006029 ORTHO05D007439 1.8e-14 82.8 113 39.8
Aa31LG1G10580 Aethionema arabicum HOM05D006029 ORTHO05D007439 2.3e-14 82.4 111 39.6
CiPaw.02G042300 Carya illinoinensis HOM05D006029 ORTHO05D007439 3.0e-14 82.0 113 38.1
MELO3C026899.2 Cucumis melo HOM05D006029 ORTHO05D007439 3.9e-14 81.6 113 38.1
CsaV3_3G043380 Cucumis sativus L. HOM05D006029 ORTHO05D007439 3.9e-14 81.6 113 38.1
vmacro12594 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 3.9e-14 81.6 113 41.6
PSO170G0977 Papaver somniferum HOM05D006029 ORTHO05D007439 6.7e-14 80.9 113 39.8
Potri.012G015900 Populus trichocarpa HOM05D006029 ORTHO05D007439 6.7e-14 80.9 113 40.7
Sabra12G0016400 Salix brachista HOM05D006029 ORTHO05D007439 6.7e-14 80.9 113 40.7
arahy.Tifrunner.gnm1.ann1.A8XVJK Arachis hypogaea HOM05D006029 ORTHO05D007439 1.5e-13 79.7 113 36.3
arahy.Tifrunner.gnm1.ann1.ZU3BRN Arachis hypogaea HOM05D006029 ORTHO05D007439 1.5e-13 79.7 113 36.3
Oeu043218.1 Olea europaea HOM05D006029 ORTHO05D007439 1.5e-13 79.7 113 40.7
TWI36G0126 Tripterygium wilfordii HOM05D006029 ORTHO05D007439 1.5e-13 79.7 113 36.3
Manes.01G243500 Manihot esculenta HOM05D006029 ORTHO05D007439 2.6e-13 79.0 113 38.1
Medtr7g116750 Medicago truncatula HOM05D006029 ORTHO05D007439 2.6e-13 79.0 116 33.6
CAN.G694.9 Capsicum annuum HOM05D006029 ORTHO05D007439 3.3e-13 78.6 113 37.2
Eucgr.E03439 Eucalyptus grandis HOM05D006029 ORTHO05D007439 3.3e-13 78.6 113 38.1
Eucgr.E03441 Eucalyptus grandis HOM05D006029 ORTHO05D007439 3.3e-13 78.6 113 38.1
Eucgr.E03442 Eucalyptus grandis HOM05D006029 ORTHO05D007439 3.3e-13 78.6 113 38.1
Eucgr.L01751 Eucalyptus grandis HOM05D006029 ORTHO05D007439 3.3e-13 78.6 113 38.1
Ciclev10022957m.g Citrus clementina HOM05D006029 ORTHO05D007439 4.4e-13 78.2 111 36.0
Lj3g0023283 Lotus japonicus HOM05D006029 ORTHO05D007439 4.4e-13 78.2 111 36.9
unitig_60.g25801 Utricularia gibba HOM05D006029 ORTHO05D007439 4.4e-13 78.2 113 40.7
Gorai.004G150300 Gossypium raimondii HOM05D006029 ORTHO05D007439 5.7e-13 77.8 113 38.9
Medtr5g030180 Medicago truncatula HOM05D006029 ORTHO05D007439 5.7e-13 77.8 115 33.0
PGSC0003DMG402023468 Solanum tuberosum HOM05D006029 ORTHO05D007439 5.7e-13 77.8 113 38.1
Glyma.18G179600 Glycine max HOM05D006029 ORTHO05D007439 7.4e-13 77.4 111 39.6
Gohir.D08G145300 Gossypium hirsutum HOM05D006029 ORTHO05D007439 7.4e-13 77.4 113 38.9
Lalb_Chr04g0261421 Lupinus albus HOM05D006029 ORTHO05D007439 7.4e-13 77.4 113 36.3
Rhsim01G0175700 Rhododendron simsii HOM05D006029 ORTHO05D007439 7.4e-13 77.4 113 39.8
AL1G11270 Arabidopsis lyrata HOM05D006029 ORTHO05D007439 9.7e-13 77.0 110 37.3
EL10Ac5g10924 Beta vulgaris HOM05D006029 ORTHO05D007439 9.7e-13 77.0 111 40.5
CARHR001260 Cardamine hirsuta HOM05D006029 ORTHO05D007439 9.7e-13 77.0 110 37.3
COL.COLO4_06245 Corchorus olitorius HOM05D006029 ORTHO05D007439 1.3e-12 76.6 113 38.9
Glyma.07G131200 Glycine max HOM05D006029 ORTHO05D007439 1.3e-12 76.6 111 38.7
Peaxi162Scf00156g00617 Petunia axillaris HOM05D006029 ORTHO05D007439 1.3e-12 76.6 113 37.2
AT1G01210 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 1.7e-12 76.3 110 37.3
AT4G07950 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 1.7e-12 76.3 110 37.3
Gohir.D12G270400 Gossypium hirsutum HOM05D006029 ORTHO05D007439 1.7e-12 76.3 113 38.1
Gorai.008G290700 Gossypium raimondii HOM05D006029 ORTHO05D007439 1.7e-12 76.3 113 38.1
Solyc05g055890.3 Solanum lycopersicum HOM05D006029 ORTHO05D007439 1.7e-12 76.3 113 37.2
Sopen05g034290 Solanum pennellii HOM05D006029 ORTHO05D007439 1.7e-12 76.3 113 37.2
MSTRG.17362 Avicennia marina HOM05D006029 ORTHO05D007439 2.8e-12 75.5 114 40.4
Carub.0003s3000 Capsella rubella HOM05D006029 ORTHO05D007439 2.8e-12 75.5 110 37.3
Gohir.A08G124200 Gossypium hirsutum HOM05D006029 ORTHO05D007439 2.8e-12 75.5 113 38.1
Hma1.2p1_1482F.1_g286210 Hydrangea macrophylla HOM05D006029 ORTHO05D007439 2.8e-12 75.5 113 37.2
TPR.G4810 Trifolium pratense HOM05D006029 ORTHO05D007439 2.8e-12 75.5 111 35.1
GSVIVG01027190001 Vitis vinifera HOM05D006029 ORTHO05D007439 2.8e-12 75.5 113 38.9
Gohir.A12G269900 Gossypium hirsutum HOM05D006029 ORTHO05D007439 4.8e-12 74.7 113 38.1
PGR102G2016 Punica granatum HOM05D006029 ORTHO05D007439 4.8e-12 74.7 113 36.3
Sp1g01080 Schrenkiella parvula HOM05D006029 ORTHO05D007439 4.8e-12 74.7 108 38.9
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 8.2e-12 73.9 113 37.2
BraA09t39405Z Brassica rapa HOM05D006029 ORTHO05D007439 1.1e-11 73.6 108 38.9
Duzib138G0795 Durio zibethinus HOM05D006029 ORTHO05D007439 1.1e-11 73.6 113 38.1
BcaC07g42429 Brassica carinata HOM05D006029 ORTHO05D007439 2.4e-11 72.4 108 38.0
A03p11160 Brassica napus HOM05D000069 ORTHO05D021930 2.4e-11 72.4 108 38.0
A09p39050 Brassica napus HOM05D006029 ORTHO05D007439 2.4e-11 72.4 108 38.0
A09p68990 Brassica napus HOM05D006029 ORTHO05D007439 2.4e-11 72.4 108 38.0
BolC3t13750H Brassica oleracea HOM05D006029 ORTHO05D007439 2.4e-11 72.4 108 38.0
BolC8t52870H Brassica oleracea HOM05D006029 ORTHO05D007439 2.4e-11 72.4 108 38.0
BraA03t10431Z Brassica rapa HOM05D006029 ORTHO05D007439 2.4e-11 72.4 108 38.0
BraA09t42236Z Brassica rapa HOM05D006029 ORTHO05D007439 2.4e-11 72.4 108 38.0
Thhalv10009170m.g Eutrema salsugineum HOM05D006029 ORTHO05D007439 2.4e-11 72.4 108 38.0
C03p12870 Brassica napus HOM05D006029 ORTHO05D007439 3.1e-11 72.0 108 38.0
Thecc.01G338500 Theobroma cacao HOM05D006029 ORTHO05D007439 3.1e-11 72.0 115 37.4
CANSAT56G3403 Cannabis sativa HOM05D006029 ORTHO05D007439 4.1e-11 71.6 111 35.1
Hund17067 Selenicereus undatus HOM05D006029 ORTHO05D007439 5.3e-11 71.2 111 37.8
SGA_v2.0_scaffold22G09953 Striga asiatica HOM05D006029 ORTHO05D007439 7.0e-11 70.9 112 38.4
MD01G1085300 Malus domestica HOM05D006029 ORTHO05D007439 9.1e-11 70.5 108 36.1
Sc02g0002910 Simmondsia chinensis HOM05D006029 ORTHO05D007439 1.2e-10 70.1 114 36.0
CSS0011460 Camellia sinensis var. sinensis HOM05D006029 ORTHO05D007439 1.6e-10 69.7 106 36.8
Migut.B01899 Erythranthe guttata HOM05D006029 ORTHO05D007439 2.0e-10 69.3 114 36.0
Peaxi162Scf00740g00556 Petunia axillaris HOM05D006029 ORTHO05D007439 4.5e-10 68.2 102 36.3
Rhsim07G0002100 Rhododendron simsii HOM05D006029 ORTHO05D007439 1.3e-09 66.6 74 45.9
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 2.2e-09 65.9 98 35.7
Atru.chr5.715 Acer truncatum HOM05D006029 ORTHO05D007439 1.1e-08 63.5 72 38.9
AagrBONN_evm.TU.Sc2ySwM_344.301 Anthoceros agrestis HOM05D006029 ORTHO05D007439 1.5e-08 63.2 66 50.0
HanXRQChr05g0130881 Helianthus annuus HOM05D006029 ORTHO05D007439 1.6e-07 59.7 113 33.6
Lsat_1_v5_gn_4_30800 Lactuca sativa HOM05D006029 ORTHO05D007439 2.7e-07 58.9 114 36.0
Carub.0003s3001 Capsella rubella HOM05D003869 ORTHO05D004718 1.4e-06 56.6 71 38.0
Sp7g14780 Schrenkiella parvula HOM05D004365 ORTHO05D005123 1.4e-06 56.6 102 30.4
vmacro23448 Vaccinium macrocarpon HOM05D006029 ORTHO05D007439 2.3e-06 55.8 63 46.0
TWI53G1753 Tripterygium wilfordii HOM05D004365 ORTHO05D005123 4.0e-06 55.1 44 50.0
Thhalv10026603m.g Eutrema salsugineum HOM05D004365 ORTHO05D005123 6.7e-06 54.3 112 31.2


User provided reference genes

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