Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO302G0053 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 9.7e-78 293.5 158 100.0
SMO164G0205 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 5.2e-55 218.0 158 77.8
SMO117G0047 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 4.0e-47 191.8 166 72.9
SMO137G0368 Selaginella moellendorffii HOM05D027672 ORTHO05D005204 1.0e-26 124.0 112 66.1
SMO202G0076 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 3.5e-19 99.0 117 59.0
SMO364G0410 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 1.7e-18 96.7 179 38.5
CDE11G0310 Ceratophyllum demersum HOM05D004178 ORTHO05D005204 5.0e-18 95.1 178 36.5
QL09p005323 Quercus lobata HOM05D004178 ORTHO05D005204 1.1e-17 94.0 175 36.6
Dinv06570 Davidia involucrata HOM05D004178 ORTHO05D005204 1.5e-17 93.6 176 35.8
Prupe.2G275800 Prunus persica HOM05D004178 ORTHO05D005204 3.3e-17 92.4 176 36.9
RcHm_v2.0_Chr1g0374131 Rosa chinensis HOM05D004178 ORTHO05D005204 3.3e-17 92.4 173 35.3
TPR.G2991 Trifolium pratense HOM05D004178 ORTHO05D005204 3.3e-17 92.4 176 34.7
CAN.G515.9 Capsicum annuum HOM05D004178 ORTHO05D005204 4.3e-17 92.0 176 36.4
Nn6g33950 Nelumbo nucifera HOM05D004178 ORTHO05D005204 4.3e-17 92.0 176 34.1
Psat7g194520 Pisum sativum HOM05D004178 ORTHO05D005204 4.3e-17 92.0 176 35.2
GSVIVG01013865001 Vitis vinifera HOM05D004178 ORTHO05D005204 4.3e-17 92.0 177 33.9
Ciclev10004204m.g Citrus clementina HOM05D004178 ORTHO05D005204 5.6e-17 91.7 164 36.6
Medtr4g061050 Medicago truncatula HOM05D004178 ORTHO05D005204 5.6e-17 91.7 176 35.8
FvH4_7g27291 Fragaria vesca HOM05D004178 ORTHO05D005204 7.3e-17 91.3 174 36.2
FAN06G2180 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.3e-17 91.3 174 36.2
FAN06G0596 Fragaria x ananassa HOM05D004178 ORTHO05D005204 9.5e-17 90.9 174 35.6
PSO782G3243 Papaver somniferum HOM05D004178 ORTHO05D005204 9.5e-17 90.9 166 35.5
PGSC0003DMG400014287 Solanum tuberosum HOM05D004178 ORTHO05D005204 9.5e-17 90.9 177 34.5
Thecc.03G153700 Theobroma cacao HOM05D004178 ORTHO05D005204 9.5e-17 90.9 172 34.3
Atru.chr1.752 Acer truncatum HOM05D004178 ORTHO05D005204 1.2e-16 90.5 174 35.1
Medtr4g036760 Medicago truncatula HOM05D004178 ORTHO05D005204 1.6e-16 90.1 176 34.7
Sopen05g030150 Solanum pennellii HOM05D004178 ORTHO05D005204 1.6e-16 90.1 176 35.8
FAN01G0652 Fragaria x ananassa HOM05D004178 ORTHO05D005204 2.1e-16 89.7 174 35.6
FAN10G0409 Fragaria x ananassa HOM05D004178 ORTHO05D005204 2.1e-16 89.7 174 35.6
Gohir.D12G200300 Gossypium hirsutum HOM05D004178 ORTHO05D005204 2.1e-16 89.7 152 36.2
Gorai.008G215500 Gossypium raimondii HOM05D004178 ORTHO05D005204 2.1e-16 89.7 152 36.2
Manes.06G133600 Manihot esculenta HOM05D004178 ORTHO05D005204 2.1e-16 89.7 176 35.2
unitig_37.g12493 Utricularia gibba HOM05D004178 ORTHO05D005204 2.1e-16 89.7 161 37.3
Zm00001eb309160 Zea mays HOM05D004178 ORTHO05D005204 2.1e-16 89.7 175 35.4
Cfa008151 Carpinus fangiana HOM05D004178 ORTHO05D005204 2.8e-16 89.4 176 34.7
Potri.003G107700 Populus trichocarpa HOM05D004178 ORTHO05D005204 2.8e-16 89.4 164 36.0
TAR375G0252 Trochodendron aralioides HOM05D004178 ORTHO05D005204 2.8e-16 89.4 176 33.5
Gohir.A12G197800 Gossypium hirsutum HOM05D004178 ORTHO05D005204 3.6e-16 89.0 152 36.2
Oeu021706.1 Olea europaea HOM05D004178 ORTHO05D005204 3.6e-16 89.0 174 35.6
Solyc05g051680.4 Solanum lycopersicum HOM05D004178 ORTHO05D005204 3.6e-16 89.0 176 35.8
Ca_30729_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 4.7e-16 88.6 176 34.7
Cc02_g04400 Coffea canephora HOM05D004178 ORTHO05D005204 4.7e-16 88.6 175 32.6
Nitab4.5_0000818g0230 Nicotiana tabacum HOM05D004178 ORTHO05D005204 4.7e-16 88.6 176 33.5
TPR.G3678 Trifolium pratense HOM05D004178 ORTHO05D005204 4.7e-16 88.6 176 34.7
BcaC06g33151 Brassica carinata HOM05D004178 ORTHO05D005204 6.2e-16 88.2 176 33.5
Nitab4.5_0003647g0020 Nicotiana tabacum HOM05D004178 ORTHO05D005204 6.2e-16 88.2 176 34.1
Sp2g24660 Schrenkiella parvula HOM05D004178 ORTHO05D005204 6.2e-16 88.2 176 33.5
A03p47060 Brassica napus HOM05D004178 ORTHO05D005204 1.1e-15 87.4 176 33.5
BraA03t13829Z Brassica rapa HOM05D004178 ORTHO05D005204 1.1e-15 87.4 176 33.5
Duzib084G0917 Durio zibethinus HOM05D004178 ORTHO05D005204 1.1e-15 87.4 175 33.7
BcaC06g33236 Brassica carinata HOM05D004178 ORTHO05D005204 1.4e-15 87.0 176 33.0
C07p45140 Brassica napus HOM05D004178 ORTHO05D005204 1.4e-15 87.0 176 33.0
BolC7t45036H Brassica oleracea HOM05D004178 ORTHO05D005204 1.4e-15 87.0 176 33.0
CSS0036077 Camellia sinensis var. sinensis HOM05D004178 ORTHO05D005204 1.4e-15 87.0 176 34.1
CiPaw.03G020700 Carya illinoinensis HOM05D004178 ORTHO05D005204 1.4e-15 87.0 176 34.7
HPP92_027283 Vanilla planifolia HOM05D004178 ORTHO05D005204 1.4e-15 87.0 165 33.3
COL.COLO4_14102 Corchorus olitorius HOM05D004178 ORTHO05D005204 1.8e-15 86.7 175 34.9
AT5G07660 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 4.0e-15 85.5 175 34.3
CARHR275220 Cardamine hirsuta HOM05D004178 ORTHO05D005204 4.0e-15 85.5 176 34.7
Peaxi162Scf00167g00610 Petunia axillaris HOM05D004178 ORTHO05D005204 4.0e-15 85.5 177 32.8
arahy.Tifrunner.gnm1.ann1.2YP1UN Arachis hypogaea HOM05D004178 ORTHO05D005204 5.2e-15 85.1 176 33.0
Migut.F00486 Erythranthe guttata HOM05D004178 ORTHO05D005204 5.2e-15 85.1 174 33.9
arahy.Tifrunner.gnm1.ann1.D3FWW6 Arachis hypogaea HOM05D004178 ORTHO05D005204 6.8e-15 84.7 176 33.0
MSTRG.8830 Avicennia marina HOM05D004178 ORTHO05D005204 6.8e-15 84.7 162 32.7
CsaV3_4G004020 Cucumis sativus L. HOM05D004178 ORTHO05D005204 6.8e-15 84.7 176 33.5
Thhalv10003566m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 6.8e-15 84.7 176 33.0
Glyma.09G229900 Glycine max HOM05D004178 ORTHO05D005204 6.8e-15 84.7 176 33.5
PSO063G1916 Papaver somniferum HOM05D004178 ORTHO05D005204 6.8e-15 84.7 177 34.5
Phvul.011G007300 Phaseolus vulgaris HOM05D004178 ORTHO05D005204 6.8e-15 84.7 176 33.5
Sed0013674 Sechium edule HOM05D004178 ORTHO05D005204 6.8e-15 84.7 176 34.1
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 8.9e-15 84.3 176 33.0
Lj1C978G4 Lonicera japonica HOM05D004178 ORTHO05D005204 8.9e-15 84.3 173 35.8
TWI14G1279 Tripterygium wilfordii HOM05D004178 ORTHO05D005204 2.0e-14 83.2 176 33.5
AUR62002220 Chenopodium quinoa HOM05D004178 ORTHO05D005204 2.6e-14 82.8 172 33.7
AL8G38150 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 3.4e-14 82.4 176 32.4
Aqoxy5G03870 Aquilegia oxysepala HOM05D004178 ORTHO05D005204 4.4e-14 82.0 175 33.1
Carub.0006s0663 Capsella rubella HOM05D004178 ORTHO05D005204 4.4e-14 82.0 175 33.7
AUR62015432 Chenopodium quinoa HOM05D004178 ORTHO05D005204 4.4e-14 82.0 172 33.1
Carub.0008s2215 Capsella rubella HOM05D004178 ORTHO05D005204 5.8e-14 81.6 176 32.4
ClCG07G016820 Citrullus lanatus HOM05D004178 ORTHO05D005204 5.8e-14 81.6 176 32.4
MELO3C017663.2 Cucumis melo HOM05D004178 ORTHO05D005204 5.8e-14 81.6 173 32.9
Actinidia13583 Actinidia chinensis HOM05D004178 ORTHO05D005204 7.5e-14 81.3 175 34.3
Ah.07g207660 Amaranthus hybridus HOM05D004178 ORTHO05D005204 7.5e-14 81.3 150 35.3
AT5G61460 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 7.5e-14 81.3 176 32.4
EL10Ac3g05856 Beta vulgaris HOM05D004178 ORTHO05D005204 7.5e-14 81.3 174 32.2
CANSAT56G2947 Cannabis sativa HOM05D004178 ORTHO05D005204 7.5e-14 81.3 175 33.1
ECA232G0935 Erigeron canadensis HOM05D004178 ORTHO05D005204 9.8e-14 80.9 176 30.1
AL6G18000 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 1.3e-13 80.5 175 31.4
C02p03240 Brassica napus HOM05D004178 ORTHO05D005204 1.3e-13 80.5 175 33.1
Eucgr.A02900 Eucalyptus grandis HOM05D004178 ORTHO05D005204 1.3e-13 80.5 175 32.6
VMungo1127G0288 Vigna mungo HOM05D004178 ORTHO05D005204 1.7e-13 80.1 176 32.4
vmacro06815 Vaccinium macrocarpon HOM05D004178 ORTHO05D005204 2.2e-13 79.7 176 33.5
Lsat_1_v5_gn_9_51940 Lactuca sativa HOM05D004178 ORTHO05D005204 2.9e-13 79.3 165 30.9
SalBow5G4122 Salvia bowleyana HOM05D004178 ORTHO05D005204 3.7e-13 79.0 177 33.3
Lj3g0020737 Lotus japonicus HOM05D004178 ORTHO05D005204 4.9e-13 78.6 165 33.9
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 4.9e-13 78.6 176 30.7
Haze_13892 Corylus avellana HOM05D004178 ORTHO05D005204 6.4e-13 78.2 191 31.4
Thhalv10012532m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 6.4e-13 78.2 175 30.9
ATR0317G120 Amborella trichopoda HOM05D004178 ORTHO05D005204 8.3e-13 77.8 176 32.4
BcaB05g21602 Brassica carinata HOM05D004178 ORTHO05D005204 8.3e-13 77.8 175 33.1
BcaNung06187 Brassica carinata HOM05D004178 ORTHO05D005204 8.3e-13 77.8 175 33.1
FAN03G3201 Fragaria x ananassa HOM05D004178 ORTHO05D005204 8.3e-13 77.8 184 32.6
Lalb_Chr19g0140351 Lupinus albus HOM05D004178 ORTHO05D005204 1.1e-12 77.4 176 34.1
MD07G1252300 Malus domestica HOM05D004178 ORTHO05D005204 1.1e-12 77.4 176 30.7
Aa31LG11G1940 Aethionema arabicum HOM05D004178 ORTHO05D005204 3.2e-12 75.9 193 31.6
BraA02t04928Z Brassica rapa HOM05D004178 ORTHO05D005204 5.4e-12 75.1 175 32.6
Rhsim03G0166000 Rhododendron simsii HOM05D004178 ORTHO05D005204 9.2e-12 74.3 224 27.2
SGA_v2.0_scaffold2G01219 Striga asiatica HOM05D004178 ORTHO05D005204 1.3e-10 70.5 172 29.1
Sabra03G0074500 Salix brachista HOM05D004178 ORTHO05D005204 1.7e-10 70.1 135 34.8
SHI13977 Sapria himalayana HOM05D004178 ORTHO05D005204 5.1e-10 68.6 131 35.1
Pp3c11_11190 Physcomitrium patens HOM05D004178 ORTHO05D005204 1.1e-09 67.4 173 28.3
Cpa.g.sc1936.1 Carica papaya HOM05D004178 ORTHO05D005204 7.3e-09 64.7 122 34.4
Psat3g047440 Pisum sativum HOM05D004178 ORTHO05D005204 2.1e-08 63.2 151 35.8
BolC2t06288H Brassica oleracea HOM05D004178 ORTHO05D005204 8.1e-08 61.2 123 39.8
Glyma.12G006400 Glycine max HOM05D004178 ORTHO05D005204 8.1e-08 61.2 85 43.5
Ah.02g120680 Amaranthus hybridus HOM05D004178 ORTHO05D005204 1.1e-07 60.8 165 31.5
AagrBONN_evm.TU.Sc2ySwM_228.971 Anthoceros agrestis HOM05D004178 ORTHO05D005204 1.4e-07 60.5 153 30.7
SMO105G0003 Selaginella moellendorffii HOM05D004178 ORTHO05D378108 3.1e-07 59.3 47 63.8
Mapoly0003s0057 Marchantia polymorpha HOM05D004178 ORTHO05D005204 6.8e-07 58.2 172 26.7
Sc19g0002080 Simmondsia chinensis HOM05D004178 ORTHO05D005204 1.5e-06 57.0 114 33.3
AL1G57860 Arabidopsis lyrata HOM05D004178 ORTHO05D005039 2.6e-06 56.2 136 34.6
AUR62042657 Chenopodium quinoa HOM05D004178 ORTHO05D005204 3.4e-06 55.8 146 34.2
MCO11G708 Micromonas commoda HOM05D004178 ORTHO05D005204 5.8e-06 55.1 170 30.0


User provided reference genes

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