Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 3.7e-120 434.9 215 100.0
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.1e-113 413.3 240 87.9
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 9.2e-39 164.5 200 43.0
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 1.7e-37 160.2 196 43.4
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 3.6e-35 152.5 169 45.6
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 3.1e-34 149.4 191 41.4
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 4.0e-34 149.1 175 46.3
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 5.2e-34 148.7 191 40.8
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 6.8e-34 148.3 191 40.8
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 8.9e-34 147.9 194 41.8
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.5e-33 147.1 182 42.3
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.5e-33 147.1 193 41.5
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 2.0e-33 146.7 191 39.8
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 2.6e-33 146.4 195 41.5
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 7.6e-33 144.8 197 42.1
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 9.9e-33 144.4 198 40.9
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 1.7e-32 143.7 202 38.6
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 2.2e-32 143.3 207 40.6
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 2.9e-32 142.9 195 41.5
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 2.9e-32 142.9 175 42.3
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 3.8e-32 142.5 173 42.8
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 4.9e-32 142.1 175 44.0
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 4.9e-32 142.1 175 42.9
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 6.4e-32 141.7 191 41.9
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 6.4e-32 141.7 197 41.1
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 1.1e-31 141.0 210 36.2
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 1.1e-31 141.0 183 39.9
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 1.1e-31 141.0 183 39.9
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 1.1e-31 141.0 193 41.5
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 1.1e-31 141.0 199 40.7
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 1.4e-31 140.6 175 42.9
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 1.9e-31 140.2 180 41.1
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 1.9e-31 140.2 195 40.0
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 2.4e-31 139.8 190 39.5
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 2.4e-31 139.8 197 40.6
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 2.4e-31 139.8 201 41.3
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 3.2e-31 139.4 174 41.4
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 4.1e-31 139.0 195 39.5
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 5.4e-31 138.7 202 39.6
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 7.1e-31 138.3 175 41.7
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 1.2e-30 137.5 175 42.3
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 2.1e-30 136.7 175 42.3
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 2.1e-30 136.7 199 41.7
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 2.1e-30 136.7 191 38.2
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 2.1e-30 136.7 175 42.3
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 2.1e-30 136.7 175 39.4
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 3.5e-30 136.0 199 39.7
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 3.5e-30 136.0 177 41.2
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 4.6e-30 135.6 175 41.1
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 6.0e-30 135.2 197 39.1
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 6.0e-30 135.2 182 40.1
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 7.8e-30 134.8 201 38.3
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 7.8e-30 134.8 216 38.0
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 7.8e-30 134.8 175 41.7
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 1.0e-29 134.4 207 36.7
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 1.0e-29 134.4 197 40.1
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 1.3e-29 134.0 199 38.2
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 1.3e-29 134.0 195 39.5
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.7e-29 133.7 175 41.1
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 1.7e-29 133.7 183 40.4
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 1.7e-29 133.7 172 40.7
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.3e-29 133.3 175 40.6
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.3e-29 133.3 175 40.6
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 2.3e-29 133.3 175 40.6
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 3.0e-29 132.9 174 43.1
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 8.6e-29 131.3 173 38.2
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 8.6e-29 131.3 173 38.2
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 8.6e-29 131.3 175 40.0
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 1.1e-28 131.0 135 47.4
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 1.1e-28 131.0 198 38.4
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 1.5e-28 130.6 177 39.5
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.5e-28 130.6 177 39.5
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 1.9e-28 130.2 174 39.7
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 2.5e-28 129.8 175 40.6
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 7.3e-28 128.3 175 37.1
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 9.6e-28 127.9 175 40.0
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 9.6e-28 127.9 175 40.0
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 9.6e-28 127.9 185 34.6
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 9.6e-28 127.9 197 37.6
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 1.2e-27 127.5 196 38.3
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 1.2e-27 127.5 175 40.0
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 1.2e-27 127.5 191 39.3
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 1.6e-27 127.1 246 34.6
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 1.6e-27 127.1 205 35.1
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 2.1e-27 126.7 175 41.1
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 2.1e-27 126.7 177 39.0
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 2.1e-27 126.7 201 38.3
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 4.7e-27 125.6 179 39.7
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 4.7e-27 125.6 175 39.4
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 6.2e-27 125.2 176 39.8
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 1.1e-26 124.4 197 37.1
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 1.1e-26 124.4 198 36.9
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.4e-26 124.0 151 44.4
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 3.1e-26 122.9 197 37.1
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 6.9e-26 121.7 164 41.5
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 8.9e-26 121.3 181 38.1
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 3.4e-25 119.4 205 35.6
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 2.4e-23 113.2 192 34.9
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 5.4e-23 112.1 173 38.7
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 1.2e-22 110.9 139 41.7
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 2.1e-22 110.2 124 44.4
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 3.0e-21 106.3 151 39.1
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 3.9e-21 105.9 105 45.7
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.5e-20 104.0 106 45.3
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 2.5e-20 103.2 100 50.0
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.8e-18 97.1 101 44.6
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 2.4e-18 96.7 126 44.4
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 5.1e-13 79.0 90 42.2
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.1e-12 77.8 99 46.5
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 2.2e-08 63.5 82 39.0


User provided reference genes

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