Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO232G0034 Selaginella moellendorffii HOM05D000207 ORTHO05D004956 2.5e-46 188.3 89 100.0
Lsat_1_v5_gn_3_117461 Lactuca sativa HOM05D000207 ORTHO05D004956 1.7e-42 175.6 87 92.0
Nn1g06872 Nelumbo nucifera HOM05D000207 ORTHO05D004956 1.7e-42 175.6 87 93.1
CANSAT54G2786 Cannabis sativa HOM05D000207 ORTHO05D004956 2.8e-42 174.9 87 92.0
ECA232G2626 Erigeron canadensis HOM05D000207 ORTHO05D004956 2.8e-42 174.9 87 90.8
ECA240G3918 Erigeron canadensis HOM05D000207 ORTHO05D004956 2.8e-42 174.9 87 90.8
GSVIVG01027834001 Vitis vinifera HOM05D000207 ORTHO05D004956 2.8e-42 174.9 87 92.0
Manes.15G041801 Manihot esculenta HOM05D000207 ORTHO05D004956 3.7e-42 174.5 87 92.0
Aqoxy1G01024 Aquilegia oxysepala HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
Cc03_g05640 Coffea canephora HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
Duzib235G1015 Durio zibethinus HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
Gohir.A05G111600 Gossypium hirsutum HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
Gohir.D05G112000 Gossypium hirsutum HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
Gorai.009G116200 Gossypium raimondii HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
Os08g0278966 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 92.0
PSO170G5684 Papaver somniferum HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
PSO198G0064 Papaver somniferum HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
PSO210G1216 Papaver somniferum HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
PGR031G0434 Punica granatum HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
Hund03049 Selenicereus undatus HOM05D000207 ORTHO05D004956 4.8e-42 174.1 87 90.8
AT4G14342 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 6.3e-42 173.7 87 92.0
CANSAT78G1427 Cannabis sativa HOM05D000207 ORTHO05D004956 6.3e-42 173.7 87 90.8
MELO3C007190.2 Cucumis melo HOM05D000207 ORTHO05D004956 6.3e-42 173.7 87 89.7
Duzib043G0002 Durio zibethinus HOM05D000207 ORTHO05D004956 6.3e-42 173.7 87 89.7
Duzib160G0169 Durio zibethinus HOM05D000207 ORTHO05D004956 6.3e-42 173.7 87 89.7
Potri.008G168000 Populus trichocarpa HOM05D000207 ORTHO05D004956 6.3e-42 173.7 87 90.8
TWI53G1374 Tripterygium wilfordii HOM05D000207 ORTHO05D004956 6.3e-42 173.7 87 90.8
CDE06G2823 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 8.2e-42 173.3 87 90.8
Os08g0444100 Oryza sativa ssp. japonica HOM05D000207 ORTHO05D004956 8.2e-42 173.3 87 90.8
Sed0003648 Sechium edule HOM05D000207 ORTHO05D004956 8.2e-42 173.3 87 90.8
Sed0023527 Sechium edule HOM05D000207 ORTHO05D004956 8.2e-42 173.3 87 90.8
Atru.chr4.2043 Acer truncatum HOM05D000207 ORTHO05D004956 1.1e-41 172.9 87 90.8
Atru.chr4.2046 Acer truncatum HOM05D000207 ORTHO05D004956 1.1e-41 172.9 87 90.8
Eucgr.E04319 Eucalyptus grandis HOM05D000207 ORTHO05D004956 1.1e-41 172.9 87 90.8
AL7G41900 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 90.8
BcaC06g35508 Brassica carinata HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 90.8
A04p07690 Brassica napus HOM05D000207 ORTHO05D000606 1.4e-41 172.6 87 90.8
A07p09140 Brassica napus HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 90.8
C04p41370 Brassica napus HOM05D000207 ORTHO05D000606 1.4e-41 172.6 87 90.8
C07p14090 Brassica napus HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 90.8
Carub.0003s2357 Capsella rubella HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 90.8
ClCG01G024000 Citrullus lanatus HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 89.7
Ciclev10013219m.g Citrus clementina HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 90.8
Thhalv10021852m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 90.8
HanXRQChr03g0091521 Helianthus annuus HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 89.7
HanXRQChr13g0421281 Helianthus annuus HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 89.7
Potri.010G070500 Populus trichocarpa HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 89.7
Thecc.06G005500 Theobroma cacao HOM05D000207 ORTHO05D004956 1.4e-41 172.6 87 89.7
MELO3C006416.2 Cucumis melo HOM05D000207 ORTHO05D004956 1.8e-41 172.2 87 89.7
CsaV3_3G012020 Cucumis sativus L. HOM05D000207 ORTHO05D004956 1.8e-41 172.2 87 89.7
Mapoly0001s0403 Marchantia polymorpha HOM05D000207 ORTHO05D004956 1.8e-41 172.2 87 92.0
PSO210G6748 Papaver somniferum HOM05D000207 ORTHO05D004956 1.8e-41 172.2 87 88.5
Hund11897 Selenicereus undatus HOM05D000207 ORTHO05D004956 1.8e-41 172.2 87 89.7
Migut.N00279 Erythranthe guttata HOM05D000207 ORTHO05D004956 2.4e-41 171.8 87 89.7
Lalb_Chr02g0158811 Lupinus albus HOM05D000207 ORTHO05D004956 2.4e-41 171.8 87 89.7
Nitab4.5_0001379g0120 Nicotiana tabacum HOM05D000207 ORTHO05D004956 2.4e-41 171.8 87 89.7
Nitab4.5_0003038g0050 Nicotiana tabacum HOM05D000207 ORTHO05D004956 2.4e-41 171.8 87 89.7
Sopen04g004070 Solanum pennellii HOM05D000207 ORTHO05D004956 2.4e-41 171.8 87 89.7
PGSC0003DMG400025301 Solanum tuberosum HOM05D000207 ORTHO05D004956 2.4e-41 171.8 87 89.7
THA.LOC104808632 Tarenaya hassleriana HOM05D000207 ORTHO05D004956 2.4e-41 171.8 87 88.5
TAR365G0659 Trochodendron aralioides HOM05D000207 ORTHO05D004956 2.4e-41 171.8 87 88.5
AagrBONN_evm.TU.Sc2ySwM_344.2015 Anthoceros agrestis HOM05D000207 ORTHO05D004956 3.1e-41 171.4 87 89.7
BcaC02g09324 Brassica carinata HOM05D000207 ORTHO05D004956 3.1e-41 171.4 87 89.7
CSS0020261 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D004956 3.1e-41 171.4 87 89.7
CARHR099290 Cardamine hirsuta HOM05D000207 ORTHO05D004956 3.1e-41 171.4 87 89.7
Thhalv10026688m.g Eutrema salsugineum HOM05D000207 ORTHO05D004956 3.1e-41 171.4 87 89.7
Glyma.18G132700 Glycine max HOM05D000207 ORTHO05D004956 3.1e-41 171.4 87 90.8
Sp3g20990 Schrenkiella parvula HOM05D000207 ORTHO05D004956 3.1e-41 171.4 87 89.7
AL3G37970 Arabidopsis lyrata HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 89.7
AT3G23325 Arabidopsis thaliana HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 89.7
BcaB02g08614 Brassica carinata HOM05D000207 ORTHO05D000606 4.1e-41 171.0 87 89.7
BolC7t41906H Brassica oleracea HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 89.7
BraA07t28708Z Brassica rapa HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 89.7
Ca_08207_v3 Cicer arietinum L. HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 89.7
Ciclev10006856m.g Citrus clementina HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 88.5
Lj3g0015983 Lotus japonicus HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 89.7
Medtr8g062750 Medicago truncatula HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 89.7
Phvul.003G055200 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 90.8
Psat4g126040 Pisum sativum HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 89.7
Psat6g018880 Pisum sativum HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 89.7
Sopen08g022730 Solanum pennellii HOM05D000207 ORTHO05D004956 4.1e-41 171.0 87 88.5
MSTRG.21917 Avicennia marina HOM05D000207 ORTHO05D004956 5.3e-41 170.6 87 88.5
ClCG05G004290 Citrullus lanatus HOM05D000207 ORTHO05D004956 5.3e-41 170.6 87 88.5
COL.COLO4_26870 Corchorus olitorius HOM05D000207 ORTHO05D004956 5.3e-41 170.6 87 87.4
Sc25g0003710 Simmondsia chinensis HOM05D000207 ORTHO05D004956 5.3e-41 170.6 85 90.6
Solyc04g008890.3 Solanum lycopersicum HOM05D000207 ORTHO05D004956 5.3e-41 170.6 87 88.5
HPP92_005049 Vanilla planifolia HOM05D000207 ORTHO05D004956 5.3e-41 170.6 85 90.6
AUR62026315 Chenopodium quinoa HOM05D000207 ORTHO05D004956 7.0e-41 170.2 85 89.4
AUR62026510 Chenopodium quinoa HOM05D000207 ORTHO05D004956 7.0e-41 170.2 85 89.4
CsaV3_6G051140 Cucumis sativus L. HOM05D000207 ORTHO05D004956 7.0e-41 170.2 85 89.4
DCAR_024259 Daucus carota HOM05D000207 ORTHO05D004956 7.0e-41 170.2 87 87.4
Dinv27061 Davidia involucrata HOM05D000207 ORTHO05D004956 7.0e-41 170.2 87 88.5
Sp7g12410 Schrenkiella parvula HOM05D000207 ORTHO05D004956 7.0e-41 170.2 87 88.5
Solyc08g069080.4 Solanum lycopersicum HOM05D000207 ORTHO05D004956 7.0e-41 170.2 87 88.5
BolC4t25716H Brassica oleracea HOM05D000207 ORTHO05D004956 9.1e-41 169.9 87 88.5
FAN16G2286 Fragaria x ananassa HOM05D000207 ORTHO05D004956 9.1e-41 169.9 87 87.4
Lsat_1_v5_gn_6_103061 Lactuca sativa HOM05D000207 ORTHO05D004956 1.2e-40 169.5 85 89.4
Prupe.4G214000 Prunus persica HOM05D000207 ORTHO05D004956 1.2e-40 169.5 87 87.4
unitig_748.g7329 Utricularia gibba HOM05D000207 ORTHO05D000606 1.5e-40 169.1 87 88.5
Actinidia39908 Actinidia chinensis HOM05D000207 ORTHO05D004956 2.0e-40 168.7 87 87.4
MD03G1200200 Malus domestica HOM05D000207 ORTHO05D004956 2.0e-40 168.7 87 86.2
RcHm_v2.0_Chr5g0039761 Rosa chinensis HOM05D000207 ORTHO05D004956 2.0e-40 168.7 87 87.4
MD11G1217300 Malus domestica HOM05D000207 ORTHO05D004956 2.6e-40 168.3 87 86.2
CiPaw.02G111100 Carya illinoinensis HOM05D000207 ORTHO05D004956 3.5e-40 167.9 87 87.4
Glyma.08G291500 Glycine max HOM05D000207 ORTHO05D004956 3.5e-40 167.9 85 90.6
FvH4_3g22750 Fragaria vesca HOM05D000207 ORTHO05D004956 4.5e-40 167.5 87 86.2
FvH4_7g05750 Fragaria vesca HOM05D000207 ORTHO05D004956 4.5e-40 167.5 87 86.2
FAN16G2624 Fragaria x ananassa HOM05D000207 ORTHO05D004956 4.5e-40 167.5 87 86.2
FAN25G2312 Fragaria x ananassa HOM05D000207 ORTHO05D004956 4.5e-40 167.5 87 86.2
Migut.G00508 Erythranthe guttata HOM05D000207 ORTHO05D004956 5.9e-40 167.2 87 86.2
Hma1.2p1_0992F.1_g245270 Hydrangea macrophylla HOM05D000207 ORTHO05D004956 5.9e-40 167.2 87 86.2
PGSC0003DMG400026872 Solanum tuberosum HOM05D000207 ORTHO05D004956 5.9e-40 167.2 88 88.6
CBR_g8906 Chara braunii HOM05D000207 ORTHO05D004956 7.7e-40 166.8 87 88.5
Medtr3g019300 Medicago truncatula HOM05D000207 ORTHO05D004956 7.7e-40 166.8 87 87.4
Medtr3g019310 Medicago truncatula HOM05D000207 ORTHO05D004956 7.7e-40 166.8 87 87.4
FAN14G2395 Fragaria x ananassa HOM05D000709 ORTHO05D004956 1.3e-39 166.0 87 83.9
FAN05G5047 Fragaria x ananassa HOM05D000709 ORTHO05D004956 2.2e-39 165.2 87 83.9
Dinv36552 Davidia involucrata HOM05D000207 ORTHO05D004956 2.9e-39 164.9 85 88.2
Actinidia11350 Actinidia chinensis HOM05D000207 ORTHO05D004956 6.5e-39 163.7 87 85.1
FAN09G1394 Fragaria x ananassa HOM05D000709 ORTHO05D004956 8.5e-39 163.3 87 82.8
FAN02G2410 Fragaria x ananassa HOM05D000709 ORTHO05D004956 9.4e-38 159.8 87 81.6
MBI07_g16899_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 1.6e-37 159.1 107 72.9
FAN01G2221 Fragaria x ananassa HOM05D000207 ORTHO05D004956 6.1e-37 157.1 103 72.8
MCO09G487 Micromonas commoda HOM05D000207 ORTHO05D004956 5.2e-36 154.1 85 81.2
vmacro15450 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 1.1e-35 152.9 108 68.5
Phvul.009G163800 Phaseolus vulgaris HOM05D000207 ORTHO05D004956 7.4e-35 150.2 75 90.7
Cpa.g.c34811.1 Carica papaya HOM05D000207 ORTHO05D004956 2.2e-34 148.7 72 97.2
VMungo1127G0964 Vigna mungo HOM05D000207 ORTHO05D004956 2.2e-34 148.7 75 93.3
EL10Ac3g04993 Beta vulgaris HOM05D000001 ORTHO05D000003 4.8e-34 147.5 72 94.4
Oeu005091.1 Olea europaea HOM05D000207 ORTHO05D004956 4.8e-34 147.5 72 94.4
QL06p018332 Quercus lobata HOM05D000207 ORTHO05D004956 4.8e-34 147.5 72 94.4
Sabra08G0128000 Salix brachista HOM05D000207 ORTHO05D004956 6.3e-34 147.1 72 94.4
Sabra10G0036900 Salix brachista HOM05D000207 ORTHO05D004956 6.3e-34 147.1 72 94.4
BraA04t16461Z Brassica rapa HOM05D000207 ORTHO05D000606 8.2e-34 146.7 76 89.5
arahy.Tifrunner.gnm1.ann1.AU04TH Arachis hypogaea HOM05D000207 ORTHO05D004956 1.1e-33 146.4 72 95.8
arahy.Tifrunner.gnm1.ann1.DCT04E Arachis hypogaea HOM05D000207 ORTHO05D004956 1.1e-33 146.4 72 95.8
HPP92_005064 Vanilla planifolia HOM05D000207 ORTHO05D004956 1.1e-33 146.4 72 93.1
arahy.Tifrunner.gnm1.ann1.Q94Q39 Arachis hypogaea HOM05D000677 ORTHO05D000727 1.4e-33 146.0 75 92.0
Zm00001eb176950 Zea mays HOM05D000207 ORTHO05D004956 1.4e-33 146.0 72 94.4
CiPaw.01G183100 Carya illinoinensis HOM05D000207 ORTHO05D004956 1.8e-33 145.6 72 93.1
vmacro21388 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 2.4e-33 145.2 72 91.7
vmacro21393 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 2.4e-33 145.2 72 91.7
Aa31LG9G3040 Aethionema arabicum HOM05D001185 ORTHO05D002551 4.1e-33 144.4 72 93.1
FAN06G2225 Fragaria x ananassa HOM05D000207 ORTHO05D004956 5.3e-33 144.1 77 83.1
PSO063G3293 Papaver somniferum HOM05D000207 ORTHO05D004956 7.0e-33 143.7 72 90.3
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 1.2e-32 142.9 70 95.7
Cfa022948 Carpinus fangiana HOM05D000411 ORTHO05D004956 1.2e-32 142.9 70 94.3
SalBow3G2895 Salvia bowleyana HOM05D000207 ORTHO05D004956 1.2e-32 142.9 72 90.3
FAN10G1241 Fragaria x ananassa HOM05D000207 ORTHO05D004956 1.6e-32 142.5 81 81.5
PGSC0003DMG400029581 Solanum tuberosum HOM05D000207 ORTHO05D004956 1.6e-32 142.5 72 90.3
FAN03G1535 Fragaria x ananassa HOM05D000207 ORTHO05D004956 5.9e-32 140.6 71 88.7
Cre14.g627900 Chlamydomonas reinhardtii HOM05D000207 ORTHO05D004956 7.7e-32 140.2 85 69.4
arahy.Tifrunner.gnm1.ann1.6C1XPZ Arachis hypogaea HOM05D000207 ORTHO05D004956 2.2e-31 138.7 70 92.9
RcHm_v2.0_Chr7g0179491 Rosa chinensis HOM05D000207 ORTHO05D004956 8.5e-31 136.7 79 78.5
PRCOL_00006150 Prasinoderma coloniale HOM05D000207 ORTHO05D004956 1.5e-30 136.0 87 67.8
MBI16_g42515_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 1.6e-29 132.5 80 81.2
unitig_32.g11701 Utricularia gibba HOM05D000207 ORTHO05D004956 8.8e-28 126.7 96 67.7
A06p07840 Brassica napus HOM05D000207 ORTHO05D004956 4.8e-26 120.9 60 91.7
MD12G1011100 Malus domestica HOM05D000207 ORTHO05D004956 1.1e-25 119.8 81 72.8
VMungo0251G1197 Vigna mungo HOM05D000207 ORTHO05D004956 4.1e-25 117.9 55 98.2
vmacro12999 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 9.1e-25 116.7 64 84.4
CAN.G274.30 Capsicum annuum HOM05D000207 ORTHO05D004956 3.5e-24 114.8 57 87.7
CDE02G4280 Ceratophyllum demersum HOM05D000207 ORTHO05D004956 6.5e-23 110.5 56 85.7
Lj4g0019776 Lotus japonicus HOM05D000207 ORTHO05D004956 1.1e-22 109.8 87 64.4
AagrBONN_evm.TU.Sc2ySwM_369.181 Anthoceros agrestis HOM05D000207 ORTHO05D004956 2.7e-21 105.1 56 78.6
Pp3c25_1640 Physcomitrium patens HOM05D000207 ORTHO05D004956 2.7e-21 105.1 56 82.1
Lj4g0025571 Lotus japonicus HOM05D000207 ORTHO05D004956 2.3e-20 102.1 78 67.9
Gohir.1Z049411 Gossypium hirsutum HOM05D000207 ORTHO05D004956 4.0e-20 101.3 47 100.0
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 2.0e-16 89.0 45 84.4
Eucgr.L00218 Eucalyptus grandis HOM05D000207 ORTHO05D004956 2.0e-16 89.0 47 87.2
A09p67600 Brassica napus HOM05D000207 ORTHO05D004956 8.6e-15 83.6 41 90.2
AagrBONN_evm.TU.Sc2ySwM_344.4872 Anthoceros agrestis HOM05D000170 ORTHO05D000159 6.1e-13 77.4 38 92.1
vmacro16885 Vaccinium macrocarpon HOM05D000207 ORTHO05D004956 1.8e-09 65.9 39 76.9
Peaxi162Scf00681g00334 Petunia axillaris HOM05D000207 ORTHO05D004956 3.1e-09 65.1 31 96.8
MBI13_g27727_MAGBIO Magnolia biondii HOM05D000207 ORTHO05D004956 7.0e-09 63.9 31 93.5
Zm00001eb114180 Zea mays HOM05D000207 ORTHO05D004956 1.2e-08 63.2 38 78.9
Ah.14g081440 Amaranthus hybridus HOM05D000207 ORTHO05D004956 2.3e-07 58.9 36 69.4


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