Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO174G0103 Selaginella moellendorffii HOM05D004712 ORTHO05D005306 2.5e-192 675.2 329 100.0
SEGI_23712 Sequoiadendron giganteum HOM05D004712 ORTHO05D005306 4.6e-122 441.8 313 68.4
AagrBONN_evm.TU.Sc2ySwM_228.3302 Anthoceros agrestis HOM05D004712 ORTHO05D005306 1.1e-118 430.6 312 68.3
Mapoly0072s0029 Marchantia polymorpha HOM05D004712 ORTHO05D005306 1.1e-118 430.6 314 65.6
GSVIVG01035336001 Vitis vinifera HOM05D004712 ORTHO05D005306 4.9e-116 421.8 312 63.8
Potri.018G058900 Populus trichocarpa HOM05D004712 ORTHO05D005306 1.4e-115 420.2 315 62.9
Prupe.1G416100 Prunus persica HOM05D004712 ORTHO05D005306 1.9e-115 419.9 312 64.7
Solyc08g065880.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 1.6e-114 416.8 312 64.7
Sopen08g019580 Solanum pennellii HOM05D004712 ORTHO05D005306 2.1e-114 416.4 312 64.7
Ciclev10008867m.g Citrus clementina HOM05D004712 ORTHO05D005306 3.5e-114 415.6 312 62.5
Atru.chr7.2032 Acer truncatum HOM05D004712 ORTHO05D005306 6.0e-114 414.8 312 62.8
ClCG08G016850 Citrullus lanatus HOM05D004712 ORTHO05D005306 7.8e-114 414.5 312 62.8
CsaV3_2G025770 Cucumis sativus L. HOM05D004712 ORTHO05D005306 1.3e-113 413.7 312 61.9
RcHm_v2.0_Chr6g0310381 Rosa chinensis HOM05D004712 ORTHO05D005306 1.3e-113 413.7 312 64.1
BcaB06g29616 Brassica carinata HOM05D004712 ORTHO05D005306 2.3e-113 412.9 316 62.3
A04p20130 Brassica napus HOM05D004712 ORTHO05D005306 2.3e-113 412.9 316 62.3
BraA04t17594Z Brassica rapa HOM05D004712 ORTHO05D005306 2.3e-113 412.9 316 62.3
BcaC02g08320 Brassica carinata HOM05D004712 ORTHO05D005306 3.0e-113 412.5 316 62.3
C04p55830 Brassica napus HOM05D004712 ORTHO05D005306 3.0e-113 412.5 316 62.3
BolC4t27113H Brassica oleracea HOM05D004712 ORTHO05D005306 3.0e-113 412.5 316 62.3
Lsat_1_v5_gn_3_27140 Lactuca sativa HOM05D004712 ORTHO05D005306 3.0e-113 412.5 314 62.4
Pp3c15_8210 Physcomitrium patens HOM05D004712 ORTHO05D005306 3.9e-113 412.1 310 66.8
Manes.03G046000 Manihot esculenta HOM05D004712 ORTHO05D005306 5.1e-113 411.8 312 63.5
Nn6g35377 Nelumbo nucifera HOM05D004712 ORTHO05D005306 6.6e-113 411.4 312 63.8
PGR031G0938 Punica granatum HOM05D004712 ORTHO05D005306 6.6e-113 411.4 318 61.9
Hund03367 Selenicereus undatus HOM05D004712 ORTHO05D005306 6.6e-113 411.4 312 63.1
QL02p001773 Quercus lobata HOM05D004712 ORTHO05D005306 8.7e-113 411.0 312 63.8
TAR624G0834 Trochodendron aralioides HOM05D004712 ORTHO05D005306 8.7e-113 411.0 326 62.3
Glyma.14G091700 Glycine max HOM05D004712 ORTHO05D005306 1.1e-112 410.6 315 61.0
Aa31LG5G9770 Aethionema arabicum HOM05D004712 ORTHO05D005306 1.5e-112 410.2 327 61.2
COL.COLO4_21017 Corchorus olitorius HOM05D004712 ORTHO05D005306 1.5e-112 410.2 312 62.5
ATR0789G022 Amborella trichopoda HOM05D004712 ORTHO05D005306 1.9e-112 409.8 314 63.1
Dinv23416 Davidia involucrata HOM05D004712 ORTHO05D005306 1.9e-112 409.8 312 62.2
Lalb_Chr22g0355941 Lupinus albus HOM05D004712 ORTHO05D005306 1.9e-112 409.8 312 62.5
Cc08_g10100 Coffea canephora HOM05D004712 ORTHO05D005306 2.5e-112 409.5 312 62.5
DCAR_004451 Daucus carota HOM05D004712 ORTHO05D005306 5.6e-112 408.3 318 62.6
ECA246G0363 Erigeron canadensis HOM05D004712 ORTHO05D005306 5.6e-112 408.3 314 62.4
CARHR115280 Cardamine hirsuta HOM05D004712 ORTHO05D005306 7.3e-112 407.9 316 62.0
Peaxi162Scf00840g00117 Petunia axillaris HOM05D004712 ORTHO05D005306 7.3e-112 407.9 312 63.1
AUR62009206 Chenopodium quinoa HOM05D004712 ORTHO05D005306 9.6e-112 407.5 312 62.2
MD08G1074400 Malus domestica HOM05D004712 ORTHO05D005306 9.6e-112 407.5 311 62.7
CSS0042817 Camellia sinensis var. sinensis HOM05D004712 ORTHO05D005306 1.2e-111 407.1 319 61.8
AL4G17960 Arabidopsis lyrata HOM05D004712 ORTHO05D005306 1.6e-111 406.8 317 61.5
THA.LOC104803739 Tarenaya hassleriana HOM05D004712 ORTHO05D005306 1.6e-111 406.8 325 59.4
VMungo0647G0552 Vigna mungo HOM05D004712 ORTHO05D005306 1.6e-111 406.8 315 61.3
EL10Ac2g03950 Beta vulgaris HOM05D004712 ORTHO05D005306 2.1e-111 406.4 312 62.2
Potri.006G234000 Populus trichocarpa HOM05D004712 ORTHO05D005306 2.1e-111 406.4 315 61.9
Duzib168G2010 Durio zibethinus HOM05D004712 ORTHO05D005306 2.8e-111 406.0 315 60.6
FAN27G0349 Fragaria x ananassa HOM05D004712 ORTHO05D005306 2.8e-111 406.0 312 63.1
CiPaw.15G042700 Carya illinoinensis HOM05D004712 ORTHO05D005306 3.6e-111 405.6 319 62.1
FAN20G0488 Fragaria x ananassa HOM05D004712 ORTHO05D005306 3.6e-111 405.6 312 63.1
Glyma.17G231700 Glycine max HOM05D004712 ORTHO05D005306 3.6e-111 405.6 315 60.6
Os01g0566900 Oryza sativa ssp. japonica HOM05D004712 ORTHO05D005306 3.6e-111 405.6 312 61.9
TWI63G0904 Tripterygium wilfordii HOM05D004712 ORTHO05D005306 3.6e-111 405.6 312 61.9
FvH4_2g32310 Fragaria vesca HOM05D004712 ORTHO05D005306 4.7e-111 405.2 312 63.1
HanXRQChr17g0538901 Helianthus annuus HOM05D004712 ORTHO05D005306 4.7e-111 405.2 312 62.8
Sabra18G0050600 Salix brachista HOM05D004712 ORTHO05D005306 4.7e-111 405.2 343 57.1
Sc09g0009600 Simmondsia chinensis HOM05D004712 ORTHO05D005306 4.7e-111 405.2 313 62.6
Thhalv10002033m.g Eutrema salsugineum HOM05D004712 ORTHO05D005306 6.2e-111 404.8 315 61.6
Gohir.A05G044400 Gossypium hirsutum HOM05D004712 ORTHO05D005306 8.1e-111 404.4 312 59.6
Gohir.D05G046000 Gossypium hirsutum HOM05D004712 ORTHO05D005306 8.1e-111 404.4 312 59.6
PSO210G0832 Papaver somniferum HOM05D004712 ORTHO05D005306 8.1e-111 404.4 311 62.1
GSVIVG01016906001 Vitis vinifera HOM05D004712 ORTHO05D005306 8.1e-111 404.4 311 61.4
AT2G25910 Arabidopsis thaliana HOM05D004712 ORTHO05D005306 1.1e-110 404.1 316 60.4
Phvul.001G032800 Phaseolus vulgaris HOM05D004712 ORTHO05D005306 1.1e-110 404.1 313 61.3
Aqoxy7G03946 Aquilegia oxysepala HOM05D004712 ORTHO05D005306 1.8e-110 403.3 312 61.5
Thecc.09G050100 Theobroma cacao HOM05D004712 ORTHO05D005306 1.8e-110 403.3 312 61.9
CANSAT25G2372 Cannabis sativa HOM05D004712 ORTHO05D005306 2.4e-110 402.9 312 61.2
Lj5g0015176 Lotus japonicus HOM05D004712 ORTHO05D005306 2.4e-110 402.9 313 62.0
Nn6g35381 Nelumbo nucifera HOM05D004712 ORTHO05D005306 2.4e-110 402.9 336 60.4
Hma1.2p1_1266F.1_g271360 Hydrangea macrophylla HOM05D004712 ORTHO05D005306 3.1e-110 402.5 313 61.7
Sp4g05810 Schrenkiella parvula HOM05D004712 ORTHO05D005306 4.0e-110 402.1 316 60.8
SalBow4G3242 Salvia bowleyana HOM05D004712 ORTHO05D005306 5.2e-110 401.7 326 59.5
FAN15G0413 Fragaria x ananassa HOM05D004712 ORTHO05D005306 1.2e-109 400.6 327 61.2
PSO210G7282 Papaver somniferum HOM05D004712 ORTHO05D005306 1.2e-109 400.6 311 61.7
Psat6g019200 Pisum sativum HOM05D004712 ORTHO05D005306 1.2e-109 400.6 315 60.3
Sabra06G0182200 Salix brachista HOM05D004712 ORTHO05D005306 1.5e-109 400.2 315 61.3
FAN24G2925 Fragaria x ananassa HOM05D004712 ORTHO05D005306 2.6e-109 399.4 312 62.8
Migut.A00161 Erythranthe guttata HOM05D004712 ORTHO05D005306 7.6e-109 397.9 312 59.6
Duzib150G0899 Durio zibethinus HOM05D004712 ORTHO05D005306 1.3e-108 397.1 312 59.9
MELO3C010771.2 Cucumis melo HOM05D004712 ORTHO05D005306 1.7e-108 396.7 288 63.5
Zm00001eb356940 Zea mays HOM05D004712 ORTHO05D005306 4.9e-108 395.2 321 61.1
Ca_13194_v3 Cicer arietinum L. HOM05D004712 ORTHO05D005306 1.1e-107 394.0 315 60.0
CAN.G20.6 Capsicum annuum HOM05D004712 ORTHO05D005306 1.9e-107 393.3 313 60.7
Actinidia21731 Actinidia chinensis HOM05D004712 ORTHO05D005306 2.4e-107 392.9 312 59.9
Nitab4.5_0005661g0020 Nicotiana tabacum HOM05D004712 ORTHO05D005306 2.4e-107 392.9 313 61.3
QL05p017273 Quercus lobata HOM05D004712 ORTHO05D005306 5.4e-107 391.7 311 60.1
Zm00001eb159970 Zea mays HOM05D004712 ORTHO05D005306 1.6e-106 390.2 327 59.3
CSS0005003 Camellia sinensis var. sinensis HOM05D004712 ORTHO05D005306 2.1e-106 389.8 312 59.9
Peaxi162Scf00038g01243 Petunia axillaris HOM05D004712 ORTHO05D005306 2.7e-106 389.4 313 60.1
TPR.G13042 Trifolium pratense HOM05D004712 ORTHO05D005306 2.7e-106 389.4 315 58.7
arahy.Tifrunner.gnm1.ann1.QZ1T53 Arachis hypogaea HOM05D004712 ORTHO05D005306 4.6e-106 388.7 312 57.7
QL05p017569 Quercus lobata HOM05D004712 ORTHO05D005306 2.3e-105 386.3 311 59.5
HPP92_009150 Vanilla planifolia HOM05D004712 ORTHO05D005306 2.3e-105 386.3 312 58.7
Medtr1g016970 Medicago truncatula HOM05D004712 ORTHO05D005306 3.9e-105 385.6 315 58.7
arahy.Tifrunner.gnm1.ann1.289CQF Arachis hypogaea HOM05D004712 ORTHO05D005306 5.1e-105 385.2 312 57.4
Nitab4.5_0000359g0220 Nicotiana tabacum HOM05D004712 ORTHO05D005306 5.1e-105 385.2 326 59.2
Nitab4.5_0005029g0040 Nicotiana tabacum HOM05D004712 ORTHO05D005306 5.1e-105 385.2 326 58.9
AUR62040203 Chenopodium quinoa HOM05D004712 ORTHO05D005306 1.1e-104 384.0 312 59.6
PGSC0003DMG401002514 Solanum tuberosum HOM05D004712 ORTHO05D005306 9.6e-104 380.9 313 58.5
TWI34G1658 Tripterygium wilfordii HOM05D004712 ORTHO05D005306 1.3e-103 380.6 301 61.1
Rhsim12G0204300 Rhododendron simsii HOM05D004712 ORTHO05D005306 4.8e-103 378.6 312 57.7
Cfa017921 Carpinus fangiana HOM05D004712 ORTHO05D005306 1.8e-102 376.7 327 57.2
Gohir.A02G116301 Gossypium hirsutum HOM05D004712 ORTHO05D005306 3.4e-101 372.5 311 56.9
Haze_18228 Corylus avellana HOM05D004712 ORTHO05D005306 4.5e-101 372.1 327 57.5
Gohir.D03G057300 Gossypium hirsutum HOM05D004712 ORTHO05D005306 7.6e-101 371.3 313 57.2
vmacro05273 Vaccinium macrocarpon HOM05D004712 ORTHO05D005306 3.8e-100 369.0 321 55.5
Eucgr.C00628 Eucalyptus grandis HOM05D004712 ORTHO05D005306 3.2e-99 365.9 269 66.2
Nitab4.5_0010821g0020 Nicotiana tabacum HOM05D004712 ORTHO05D005306 5.4e-99 365.2 286 60.8
Gorai.009G047400 Gossypium raimondii HOM05D004712 ORTHO05D005306 1.6e-98 363.6 285 59.6
Solyc03g121250.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 5.1e-97 358.6 289 60.2
Rhsim08G0230100 Rhododendron simsii HOM05D004712 ORTHO05D005306 1.5e-96 357.1 357 50.7
Ah.10g034640 Amaranthus hybridus HOM05D004712 ORTHO05D005306 7.4e-96 354.8 324 53.7
MBI04_g12189_MAGBIO Magnolia biondii HOM05D004712 ORTHO05D005306 1.3e-95 354.0 329 55.3
Lj7A695G32 Lonicera japonica HOM05D004712 ORTHO05D005306 2.1e-95 353.2 288 59.0
Sed0015351 Sechium edule HOM05D004712 ORTHO05D005306 2.1e-95 353.2 312 55.4
Dinv30410 Davidia involucrata HOM05D004712 ORTHO05D005306 4.8e-95 352.1 268 62.7
AUR62040198 Chenopodium quinoa HOM05D004712 ORTHO05D005306 9.0e-94 347.8 288 59.0
AUR62031977 Chenopodium quinoa HOM05D004712 ORTHO05D005306 4.5e-93 345.5 308 52.3
Manes.16G077100 Manihot esculenta HOM05D004712 ORTHO05D005306 1.9e-91 340.1 248 65.7
Lj5A50G64 Lonicera japonica HOM05D004712 ORTHO05D005306 2.7e-90 336.3 277 57.4
Pp3c9_13080 Physcomitrium patens HOM05D004712 ORTHO05D005306 2.5e-88 329.7 230 68.7
Sopen03g040060 Solanum pennellii HOM05D004712 ORTHO05D005306 2.5e-88 329.7 291 57.7
MD15G1062100 Malus domestica HOM05D004712 ORTHO05D005306 8.4e-84 314.7 311 52.4
Sopen01g026340 Solanum pennellii HOM05D000014 ORTHO05D005306 1.1e-83 314.3 295 52.2
Glyma.04G087900 Glycine max HOM05D004712 ORTHO05D005306 6.5e-76 288.5 317 50.5
vmacro17006 Vaccinium macrocarpon HOM05D004712 ORTHO05D005306 6.5e-76 288.5 388 41.5
Carub.0004s0573 Capsella rubella HOM05D004712 ORTHO05D005306 2.8e-71 273.1 226 58.8
COL.COLO4_30565 Corchorus olitorius HOM05D004712 ORTHO05D005306 6.9e-70 268.5 229 55.9
CAN.G1143.35 Capsicum annuum HOM05D004712 ORTHO05D005306 4.5e-69 265.8 216 57.9
AUR62022272 Chenopodium quinoa HOM05D004712 ORTHO05D005306 2.9e-68 263.1 229 52.0
unitig_748.g8268 Utricularia gibba HOM05D004712 ORTHO05D005306 3.0e-65 253.1 308 42.5
unitig_32.g10885 Utricularia gibba HOM05D004712 ORTHO05D005306 2.6e-61 240.0 273 47.6
CDE06G1081 Ceratophyllum demersum HOM05D004712 ORTHO05D005306 1.4e-54 217.6 171 58.5
Solyc01g060200.3 Solanum lycopersicum HOM05D004712 ORTHO05D005306 1.0e-52 211.5 245 44.1
Cpa.g.sc1834.1 Carica papaya HOM05D004712 ORTHO05D005306 4.2e-51 206.1 151 65.6
Gorai.003G060400 Gossypium raimondii HOM05D004712 ORTHO05D005306 7.2e-43 178.7 154 57.8
SGA_v2.0_scaffold88G27214 Striga asiatica HOM05D004712 ORTHO05D005306 2.0e-40 170.6 143 55.2
Cpa.g.c30793.3 Carica papaya HOM05D004712 ORTHO05D005306 2.4e-38 163.7 132 56.1
CDE06G1637 Ceratophyllum demersum HOM05D004712 ORTHO05D005306 2.9e-36 156.8 107 66.4
Glyma.20G062400 Glycine max HOM05D004712 ORTHO05D005306 9.5e-27 125.2 93 61.3
ATR0626G141 Amborella trichopoda HOM05D004712 ORTHO05D005306 2.9e-23 113.6 175 41.7
Cpa.g.sc131.11 Carica papaya HOM05D004712 ORTHO05D005306 3.5e-21 106.7 64 75.0
Hma1.2p1_0051F.1_g029750 Hydrangea macrophylla HOM05D004712 ORTHO05D005306 9.5e-19 98.6 64 68.8
Cpa.g.sc131.8 Carica papaya HOM05D004712 ORTHO05D005306 8.9e-17 92.0 83 57.8
MCO15G238 Micromonas commoda HOM05D015906 ORTHO05D005306 9.8e-16 88.6 207 29.5
Cpa.g.sc131.9 Carica papaya HOM05D004712 ORTHO05D005306 6.4e-15 85.9 87 42.5
COL.COLO4_30564 Corchorus olitorius HOM05D004712 ORTHO05D005306 1.3e-12 78.2 59 62.7
Cre03.g152400 Chlamydomonas reinhardtii HOM05D015906 ORTHO05D028597 2.3e-12 77.4 223 29.6
Cre03.g152425 Chlamydomonas reinhardtii HOM05D004712 ORTHO05D005306 1.5e-11 74.7 197 26.9
MCO09G663 Micromonas commoda HOM05D015906 ORTHO05D005306 2.3e-09 67.4 173 31.2
Cre03.g205300 Chlamydomonas reinhardtii HOM05D062317 ORTHO05D140869 3.4e-08 63.5 193 31.1
Cc04_g02330 Coffea canephora HOM05D004712 ORTHO05D005306 9.9e-08 62.0 49 55.1
MSTRG.22613 Avicennia marina HOM05D004712 ORTHO05D005306 4.9e-07 59.7 74 41.9
AT1G54440 Arabidopsis thaliana HOM05D002024 ORTHO05D004352 1.4e-06 58.2 197 25.9


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