Gene: Solyc01g060200.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g060200.3
  • Transcript Identifier Solyc01g060200.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 62977889-62983728 : negative

Gene Family Information

  • ID HOM05D004712
  • #Genes/#Species 155/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g060200.3.1
  • uniprot A0A3Q7EF70
  • gene_id Solyc01g060200

Descriptions

  • Description 3'-5' exonuclease domain (AHRD V3.3 *** A0A200QLJ1_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006139
IEA
GOA Databasenucleobase-containing compound metabolic process
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008408
IEA
GOA Database3'-5' exonuclease activity
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D004712

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR002562 3'-5' exonuclease domain
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.1 not assigned.annotated