Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO173G0095 Selaginella moellendorffii HOM05D003266 ORTHO05D003718 0.0e+00 1488.4 732 100.0
Mapoly0010s0126 Marchantia polymorpha HOM05D003266 ORTHO05D036665 3.7e-124 449.9 945 33.0
Pp3c18_12540 Physcomitrium patens HOM05D003266 ORTHO05D003718 2.8e-95 354.0 606 35.8
SEGI_01034 Sequoiadendron giganteum HOM05D003266 ORTHO05D036665 2.1e-90 337.8 558 37.1
Manes.08G110200 Manihot esculenta HOM05D003266 ORTHO05D003718 4.1e-62 243.8 772 27.2
MCO04G482 Micromonas commoda HOM05D003266 ORTHO05D003718 4.1e-62 243.8 820 28.9
Sp1g38720 Schrenkiella parvula HOM05D003266 ORTHO05D003718 3.4e-61 240.7 746 28.4
BolC6t35830H Brassica oleracea HOM05D003266 ORTHO05D003718 4.5e-61 240.4 730 27.9
AL1G60260 Arabidopsis lyrata HOM05D003266 ORTHO05D003718 1.3e-60 238.8 735 28.0
CARHR042320 Cardamine hirsuta HOM05D003266 ORTHO05D003718 1.3e-60 238.8 703 28.9
C06p07410 Brassica napus HOM05D003266 ORTHO05D003718 1.7e-60 238.4 730 27.8
Carub.0001s4111 Capsella rubella HOM05D003266 ORTHO05D003718 2.9e-60 237.7 743 28.4
Thhalv10011231m.g Eutrema salsugineum HOM05D003266 ORTHO05D003718 6.5e-60 236.5 746 27.9
AT1G52160 Arabidopsis thaliana HOM05D003266 ORTHO05D003718 2.5e-59 234.6 750 27.5
AUR62031873 Chenopodium quinoa HOM05D003266 ORTHO05D003718 4.2e-59 233.8 793 26.6
Lsat_1_v5_gn_4_100861 Lactuca sativa HOM05D003266 ORTHO05D003718 7.2e-59 233.0 747 28.2
A06p02000 Brassica napus HOM05D003266 ORTHO05D003718 1.6e-58 231.9 727 27.5
BraA06t23416Z Brassica rapa HOM05D003266 ORTHO05D003718 2.7e-58 231.1 724 27.3
THA.LOC104817970 Tarenaya hassleriana HOM05D003266 ORTHO05D003718 2.7e-58 231.1 756 28.0
Aa31LG10G2720 Aethionema arabicum HOM05D003266 ORTHO05D003718 1.0e-57 229.2 766 27.9
BraA05t22151Z Brassica rapa HOM05D003266 ORTHO05D003718 1.0e-57 229.2 750 27.5
Aa31LG8G3410 Aethionema arabicum HOM05D003266 ORTHO05D003718 1.4e-57 228.8 760 28.3
AT3G16260 Arabidopsis thaliana HOM05D003266 ORTHO05D003718 1.4e-57 228.8 762 27.0
BcaB06g25715 Brassica carinata HOM05D003266 ORTHO05D003718 1.4e-57 228.8 751 27.0
Thhalv10019999m.g Eutrema salsugineum HOM05D003266 ORTHO05D003718 1.8e-57 228.4 763 27.7
A05p33260 Brassica napus HOM05D003266 ORTHO05D003718 2.3e-57 228.0 756 27.4
CARHR091470 Cardamine hirsuta HOM05D003266 ORTHO05D003718 2.3e-57 228.0 760 27.6
Hund06647 Selenicereus undatus HOM05D003266 ORTHO05D003718 3.0e-57 227.6 765 26.8
Carub.0003s1601 Capsella rubella HOM05D003266 ORTHO05D003718 3.9e-57 227.3 762 27.7
HanXRQChr09g0275951 Helianthus annuus HOM05D003266 ORTHO05D003718 5.1e-57 226.9 768 27.5
Sp3g14630 Schrenkiella parvula HOM05D003266 ORTHO05D003718 6.7e-57 226.5 768 27.1
BcaC05g28901 Brassica carinata HOM05D003266 ORTHO05D003718 8.8e-57 226.1 750 27.3
VMungo1080G0852 Vigna mungo HOM05D003266 ORTHO05D003718 8.8e-57 226.1 819 26.9
PGR102G0722 Punica granatum HOM05D003266 ORTHO05D003718 1.1e-56 225.7 784 27.0
BolC5t33776H Brassica oleracea HOM05D003266 ORTHO05D003718 1.5e-56 225.3 757 27.3
Thecc.06G095700 Theobroma cacao HOM05D003266 ORTHO05D003718 2.0e-56 224.9 780 27.1
C05p50250 Brassica napus HOM05D003266 ORTHO05D003718 2.6e-56 224.6 757 27.3
Phvul.005G170100 Phaseolus vulgaris HOM05D003266 ORTHO05D003718 5.7e-56 223.4 821 26.3
Zm00001eb339290 Zea mays HOM05D003266 ORTHO05D003718 5.7e-56 223.4 791 26.5
Glyma.13G356200 Glycine max HOM05D003266 ORTHO05D003718 7.4e-56 223.0 808 27.0
AL3G29000 Arabidopsis lyrata HOM05D003266 ORTHO05D003718 1.3e-55 222.2 763 27.1
Lj3g0015133 Lotus japonicus HOM05D003266 ORTHO05D003718 1.3e-55 222.2 786 26.5
Potri.001G186900 Populus trichocarpa HOM05D003266 ORTHO05D003718 1.3e-55 222.2 782 26.5
Sed0020980 Sechium edule HOM05D003266 ORTHO05D003718 2.2e-55 221.5 747 27.2
ECA232G0114 Erigeron canadensis HOM05D003266 ORTHO05D003718 2.8e-55 221.1 774 27.0
Lalb_Chr22g0351451 Lupinus albus HOM05D003266 ORTHO05D003718 4.8e-55 220.3 774 27.5
TPR.G37248 Trifolium pratense HOM05D003266 ORTHO05D003718 4.8e-55 220.3 796 26.1
RcHm_v2.0_Chr2g0139581 Rosa chinensis HOM05D003266 ORTHO05D003718 6.3e-55 219.9 817 26.2
Manes.11G036300 Manihot esculenta HOM05D003266 ORTHO05D003718 1.1e-54 219.2 776 26.9
Cpa.g.sc34.31 Carica papaya HOM05D003266 ORTHO05D003718 3.1e-54 217.6 811 25.9
Glyma.15G017900 Glycine max HOM05D003266 ORTHO05D003718 3.1e-54 217.6 832 26.6
GSVIVG01017040001 Vitis vinifera HOM05D003266 ORTHO05D003718 4.1e-54 217.2 765 27.2
SMO201G0121 Selaginella moellendorffii HOM05D003266 ORTHO05D003718 5.3e-54 216.9 544 29.6
Nn2g12597 Nelumbo nucifera HOM05D003266 ORTHO05D003718 7.0e-54 216.5 849 26.7
CSS0002644 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 9.1e-54 216.1 825 27.0
HanXRQChr16g0501281 Helianthus annuus HOM05D003266 ORTHO05D003718 1.2e-53 215.7 530 31.1
Actinidia32711 Actinidia chinensis HOM05D003266 ORTHO05D003718 1.6e-53 215.3 816 27.1
Dinv38001 Davidia involucrata HOM05D003266 ORTHO05D003718 2.0e-53 214.9 830 25.9
Duzib160G0509 Durio zibethinus HOM05D003266 ORTHO05D003718 2.0e-53 214.9 784 26.7
Sabra01G0153400 Salix brachista HOM05D003266 ORTHO05D003718 2.0e-53 214.9 807 25.9
Eucgr.J02950 Eucalyptus grandis HOM05D003266 ORTHO05D003718 3.5e-53 214.2 821 25.9
Gohir.A10G067100 Gossypium hirsutum HOM05D003266 ORTHO05D003718 3.5e-53 214.2 768 26.3
Psat5g297200 Pisum sativum HOM05D003266 ORTHO05D003718 4.5e-53 213.8 777 26.1
Hma1.2p1_1689F.1_g297710 Hydrangea macrophylla HOM05D003266 ORTHO05D003718 7.7e-53 213.0 803 26.7
Sc12g0009560 Simmondsia chinensis HOM05D003266 ORTHO05D003718 7.7e-53 213.0 781 26.9
CANSAT56G3441 Cannabis sativa HOM05D003266 ORTHO05D003718 2.2e-52 211.5 724 27.9
TAR626G0182 Trochodendron aralioides HOM05D003266 ORTHO05D003718 3.8e-52 210.7 858 26.0
TAR636G2661 Trochodendron aralioides HOM05D003266 ORTHO05D003718 3.8e-52 210.7 856 25.9
Cfa002112 Carpinus fangiana HOM05D003266 ORTHO05D003718 6.5e-52 209.9 838 26.3
CANSAT80G0873 Cannabis sativa HOM05D003266 ORTHO05D003718 8.5e-52 209.5 490 31.0
COL.COLO4_30471 Corchorus olitorius HOM05D003266 ORTHO05D003718 8.5e-52 209.5 774 26.4
Aqoxy7G01499 Aquilegia oxysepala HOM05D003266 ORTHO05D003718 1.1e-51 209.1 610 27.7
Sopen00g008370 Solanum pennellii HOM05D003266 ORTHO05D003718 1.9e-51 208.4 791 26.7
Gohir.D10G068200 Gossypium hirsutum HOM05D003266 ORTHO05D003718 2.5e-51 208.0 780 26.0
Gorai.011G072800 Gossypium raimondii HOM05D003266 ORTHO05D003718 3.2e-51 207.6 774 25.5
Atru.chr1.3468 Acer truncatum HOM05D003266 ORTHO05D003718 4.2e-51 207.2 771 26.1
MSTRG.22654 Avicennia marina HOM05D003266 ORTHO05D003718 4.2e-51 207.2 805 25.7
Lalb_Chr24g0396021 Lupinus albus HOM05D003266 ORTHO05D003718 4.2e-51 207.2 807 27.0
CANSAT80G0796 Cannabis sativa HOM05D003266 ORTHO05D003718 5.5e-51 206.8 790 26.1
Solyc03g120470.4 Solanum lycopersicum HOM05D003266 ORTHO05D003718 7.2e-51 206.5 798 26.4
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 1.2e-50 205.7 856 25.8
Solyc10g079670.2 Solanum lycopersicum HOM05D003266 ORTHO05D003718 1.6e-50 205.3 735 27.9
MD03G1197500 Malus domestica HOM05D003266 ORTHO05D003718 2.1e-50 204.9 832 25.8
Nitab4.5_0000571g0240 Nicotiana tabacum HOM05D003266 ORTHO05D003718 2.1e-50 204.9 568 28.2
CiPaw.01G233800 Carya illinoinensis HOM05D003266 ORTHO05D003718 2.7e-50 204.5 816 25.9
PSO210G4271 Papaver somniferum HOM05D003266 ORTHO05D003718 3.6e-50 204.1 808 25.7
PSO210G6470 Papaver somniferum HOM05D003266 ORTHO05D003718 3.6e-50 204.1 810 25.8
vmacro18872 Vaccinium macrocarpon HOM05D003266 ORTHO05D003718 3.6e-50 204.1 796 26.5
Migut.I00926 Erythranthe guttata HOM05D003266 ORTHO05D003718 4.7e-50 203.8 768 26.3
Solyc12g044370.3 Solanum lycopersicum HOM05D003266 ORTHO05D003718 4.7e-50 203.8 480 32.1
PGSC0003DMG401002553 Solanum tuberosum HOM05D003266 ORTHO05D003718 4.7e-50 203.8 797 25.6
QL05p021182 Quercus lobata HOM05D003266 ORTHO05D003718 6.1e-50 203.4 820 25.4
TWI12G1119 Tripterygium wilfordii HOM05D003266 ORTHO05D003718 6.1e-50 203.4 792 26.9
Sc12g0009670 Simmondsia chinensis HOM05D003266 ORTHO05D003718 8.0e-50 203.0 756 27.0
Lj5C56T10 Lonicera japonica HOM05D003266 ORTHO05D003718 1.0e-49 202.6 813 27.3
arahy.Tifrunner.gnm1.ann1.MP8KIY Arachis hypogaea HOM05D003266 ORTHO05D003718 1.8e-49 201.8 769 26.4
Cc04_g02800 Coffea canephora HOM05D003266 ORTHO05D003718 1.8e-49 201.8 818 25.3
PGSC0003DMG400026462 Solanum tuberosum HOM05D003266 ORTHO05D003718 1.8e-49 201.8 520 30.6
Rhsim08G0225600 Rhododendron simsii HOM05D003266 ORTHO05D003718 2.3e-49 201.4 799 25.4
SalBow2G0145 Salvia bowleyana HOM05D003266 ORTHO05D003718 2.3e-49 201.4 766 26.9
Medtr2g101390 Medicago truncatula HOM05D003266 ORTHO05D003718 3.0e-49 201.1 785 25.5
Ciclev10024815m.g Citrus clementina HOM05D003266 ORTHO05D003718 4.0e-49 200.7 782 26.9
SMO134G0187 Selaginella moellendorffii HOM05D003266 ORTHO05D003718 4.0e-49 200.7 774 26.5
Actinidia21698 Actinidia chinensis HOM05D003266 ORTHO05D003718 5.2e-49 200.3 544 29.0
CsaV3_7G033540 Cucumis sativus L. HOM05D003266 ORTHO05D003718 6.7e-49 199.9 821 26.4
Gorai.002G074200 Gossypium raimondii HOM05D003266 ORTHO05D003718 6.7e-49 199.9 582 27.8
PSO339G2930 Papaver somniferum HOM05D003266 ORTHO05D003718 8.8e-49 199.5 734 26.4
Sopen10g030300 Solanum pennellii HOM05D003266 ORTHO05D003718 8.8e-49 199.5 725 27.9
Sopen12g022640 Solanum pennellii HOM05D003266 ORTHO05D003718 8.8e-49 199.5 480 31.2
EL10Ac2g02463 Beta vulgaris HOM05D003266 ORTHO05D003718 1.5e-48 198.7 542 28.2
AUR62024783 Chenopodium quinoa HOM05D003266 ORTHO05D003718 3.3e-48 197.6 776 26.9
Nitab4.5_0002424g0070 Nicotiana tabacum HOM05D003266 ORTHO05D003718 3.3e-48 197.6 820 25.5
Hund00661 Selenicereus undatus HOM05D003266 ORTHO05D003718 3.3e-48 197.6 823 25.4
Prupe.3G063700 Prunus persica HOM05D003266 ORTHO05D003718 4.4e-48 197.2 813 25.2
Aqoxy5G00790 Aquilegia oxysepala HOM05D003266 ORTHO05D003718 9.7e-48 196.1 299 39.5
DCAR_026337 Daucus carota HOM05D003266 ORTHO05D003718 1.3e-47 195.7 790 25.2
Gohir.D01G054332 Gossypium hirsutum HOM05D003266 ORTHO05D003718 1.3e-47 195.7 584 27.4
CSS0038683 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 2.2e-47 194.9 776 25.9
SEGI_37309 Sequoiadendron giganteum HOM05D003266 ORTHO05D036665 2.8e-47 194.5 884 23.1
Sed0017993 Sechium edule HOM05D003266 ORTHO05D003718 3.7e-47 194.1 809 26.8
Peaxi162Scf00034g00317 Petunia axillaris HOM05D003266 ORTHO05D003718 8.2e-47 193.0 741 26.3
Haze_16335 Corylus avellana HOM05D003266 ORTHO05D003718 2.4e-46 191.4 838 24.6
Nitab4.5_0003039g0050 Nicotiana tabacum HOM05D003266 ORTHO05D003718 2.4e-46 191.4 526 29.5
Ah.01g021810 Amaranthus hybridus HOM05D003266 ORTHO05D003718 3.1e-46 191.0 739 26.3
TAR383G0500 Trochodendron aralioides HOM05D003266 ORTHO05D003718 4.1e-46 190.7 839 26.3
EL10Ac9g22044 Beta vulgaris HOM05D003266 ORTHO05D003718 5.3e-46 190.3 809 24.7
SGA_v2.0_scaffold69G23353 Striga asiatica HOM05D003266 ORTHO05D003718 5.3e-46 190.3 730 26.0
Peaxi162Scf00015g00241 Petunia axillaris HOM05D003266 ORTHO05D003718 9.1e-46 189.5 790 26.7
Pp3c14_3370 Physcomitrium patens HOM05D003266 ORTHO05D003718 1.2e-45 189.1 860 24.3
AUR62032438 Chenopodium quinoa HOM05D003266 ORTHO05D003718 3.5e-45 187.6 782 26.6
PSO017G5626 Papaver somniferum HOM05D003266 ORTHO05D003718 3.5e-45 187.6 505 29.9
Oeu062570.2 Olea europaea HOM05D003266 ORTHO05D003718 5.9e-45 186.8 331 36.3
ATR0705G157 Amborella trichopoda HOM05D003266 ORTHO05D003718 1.3e-44 185.7 865 24.4
Lj9C510G10 Lonicera japonica HOM05D003266 ORTHO05D003718 1.7e-44 185.3 792 25.6
Mapoly0003s0137 Marchantia polymorpha HOM05D003266 ORTHO05D003718 2.9e-44 184.5 551 27.9
AUR62022165 Chenopodium quinoa HOM05D003266 ORTHO05D003718 5.0e-44 183.7 347 32.3
Hund09088 Selenicereus undatus HOM05D003266 ORTHO05D003718 5.0e-44 183.7 588 26.5
Cre16.g680678 Chlamydomonas reinhardtii HOM05D003266 ORTHO05D003718 4.2e-43 180.6 434 31.8
SEGI_12386 Sequoiadendron giganteum HOM05D003266 ORTHO05D003718 5.5e-43 180.3 364 31.9
MELO3C024265.2 Cucumis melo HOM05D003266 ORTHO05D003718 7.2e-43 179.9 352 34.9
Nitab4.5_0013558g0010 Nicotiana tabacum HOM05D003266 ORTHO05D003718 1.2e-42 179.1 564 26.8
BcaC08g43373 Brassica carinata HOM05D003266 ORTHO05D003718 2.7e-42 177.9 667 26.1
Ca_01149_v3 Cicer arietinum L. HOM05D003266 ORTHO05D003718 1.4e-41 175.6 794 25.3
Cre01.g039900 Chlamydomonas reinhardtii HOM05D003266 ORTHO05D003718 2.0e-40 171.8 306 33.3
arahy.Tifrunner.gnm1.ann1.X5C2Q6 Arachis hypogaea HOM05D003266 ORTHO05D003718 2.6e-40 171.4 772 24.9
CSS0038057 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 5.7e-40 170.2 791 24.8
PRCOL_00000971 Prasinoderma coloniale HOM05D003266 ORTHO05D003718 5.7e-40 170.2 523 29.8
CBR_g8326 Chara braunii HOM05D003266 ORTHO05D003718 9.1e-38 162.9 391 29.7
Hma1.2p1_1689F.1_g297680 Hydrangea macrophylla HOM05D003266 ORTHO05D003718 2.7e-37 161.4 298 35.2
ClCG09G001800 Citrullus lanatus HOM05D003266 ORTHO05D003718 7.7e-37 159.8 804 25.2
CAN.G438.41 Capsicum annuum HOM05D003266 ORTHO05D003718 1.7e-36 158.7 333 31.8
FvH4_6g31990 Fragaria vesca HOM05D003266 ORTHO05D003718 8.5e-36 156.4 728 24.7
CBR_g17159 Chara braunii HOM05D000019 ORTHO05D003718 1.5e-35 155.6 146 54.1
FAN05G1225 Fragaria x ananassa HOM05D003266 ORTHO05D003718 1.2e-34 152.5 726 24.7
COL.COLO4_29286 Corchorus olitorius HOM05D003266 ORTHO05D003718 2.7e-34 151.4 357 30.5
SHI11014 Sapria himalayana HOM05D003266 ORTHO05D003718 6.8e-33 146.7 443 28.4
AUR62032707 Chenopodium quinoa HOM05D003266 ORTHO05D003718 8.8e-33 146.4 464 28.4
FAN14G1864 Fragaria x ananassa HOM05D003266 ORTHO05D003718 5.7e-32 143.7 733 23.9
unitig_748.g8095 Utricularia gibba HOM05D003266 ORTHO05D003718 2.7e-29 134.8 261 32.6
Peaxi162Scf00772g00038 Petunia axillaris HOM05D003266 ORTHO05D003718 1.2e-26 125.9 250 34.0
CAN.G641.69 Capsicum annuum HOM05D000432 ORTHO05D000320 1.6e-26 125.6 142 45.8
Prupe.3G063800 Prunus persica HOM05D003266 ORTHO05D003718 1.8e-25 122.1 156 39.7
Nitab4.5_0006202g0010 Nicotiana tabacum HOM05D003266 ORTHO05D003718 2.3e-25 121.7 263 30.8
COL.COLO4_08423 Corchorus olitorius HOM05D003266 ORTHO05D003718 4.0e-25 120.9 512 25.2
Cfa022664 Carpinus fangiana HOM05D003266 ORTHO05D003718 8.9e-25 119.8 246 32.1
Gohir.A01G067100 Gossypium hirsutum HOM05D003266 ORTHO05D003718 2.9e-23 114.8 544 23.2
CAN.G641.60 Capsicum annuum HOM05D003266 ORTHO05D003718 3.9e-20 104.4 336 27.1
CAN.G394.131 Capsicum annuum HOM05D003266 ORTHO05D003718 4.7e-18 97.4 551 23.2
Peaxi162Scf00772g00067 Petunia axillaris HOM05D003266 ORTHO05D003718 2.0e-16 92.0 152 34.9
Nitab4.5_0006515g0010 Nicotiana tabacum HOM05D003266 ORTHO05D003718 2.2e-15 88.6 347 24.8
Oeu040356.1 Olea europaea HOM05D003266 ORTHO05D003718 8.3e-15 86.7 695 22.3
Psat2g178960 Pisum sativum HOM05D003266 ORTHO05D003718 3.2e-14 84.7 109 39.4
Nitab4.5_0001147g0060 Nicotiana tabacum HOM05D003266 ORTHO05D003718 4.1e-14 84.3 265 25.7
Psat1g100680 Pisum sativum HOM05D003266 ORTHO05D003718 3.5e-13 81.3 109 37.6
CDE05G0037 Ceratophyllum demersum HOM05D003266 ORTHO05D003718 1.0e-12 79.7 110 40.9
FAN09G1082 Fragaria x ananassa HOM05D003266 ORTHO05D003718 7.3e-11 73.6 91 40.7
CBR_g12605 Chara braunii HOM05D003266 ORTHO05D012968 2.1e-10 72.0 339 23.6
FAN09G1259 Fragaria x ananassa HOM05D003266 ORTHO05D003718 2.3e-09 68.6 74 45.9
SHI11017 Sapria himalayana HOM05D003266 ORTHO05D003718 6.8e-09 67.0 103 36.9
CDE05G2267 Ceratophyllum demersum HOM05D000103 ORTHO05D000049 3.4e-08 64.7 69 47.8
Oeu062565.1 Olea europaea HOM05D003266 ORTHO05D003718 4.4e-08 64.3 167 29.9
PSO384G3548 Papaver somniferum HOM05D003266 ORTHO05D003718 1.3e-07 62.8 262 26.0
PGSC0003DMG402002553 Solanum tuberosum HOM05D003266 ORTHO05D003718 2.9e-07 61.6 72 43.1
BcaB01g03985 Brassica carinata HOM05D003266 ORTHO05D003718 5.4e-06 57.4 72 45.8


User provided reference genes

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