Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 8.8e-240 833.6 536 100.0
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 1.2e-26 125.6 236 31.8
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 2.2e-25 121.3 192 37.5
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 2.9e-25 120.9 187 36.4
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 2.9e-25 120.9 167 37.1
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 3.8e-25 120.6 175 37.7
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.1e-24 119.0 232 31.9
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 1.1e-24 119.0 232 31.5
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 1.1e-24 119.0 239 33.9
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 1.1e-24 119.0 239 33.5
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.4e-24 118.6 241 33.2
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.9e-24 118.2 190 37.4
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 1.9e-24 118.2 241 33.2
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 2.5e-24 117.9 164 41.5
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 3.2e-24 117.5 233 31.3
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 3.2e-24 117.5 233 33.5
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 7.2e-24 116.3 237 36.3
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 7.2e-24 116.3 235 33.6
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 7.2e-24 116.3 231 35.9
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 9.4e-24 115.9 188 34.6
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 9.4e-24 115.9 174 37.9
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 2.7e-23 114.4 238 34.5
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 3.6e-23 114.0 239 32.2
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 4.7e-23 113.6 240 32.5
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 4.7e-23 113.6 167 37.1
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 6.1e-23 113.2 239 33.1
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 6.1e-23 113.2 172 34.9
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 7.9e-23 112.8 167 34.7
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 7.9e-23 112.8 167 34.7
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 1.0e-22 112.5 166 34.9
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 1.0e-22 112.5 240 31.2
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 1.0e-22 112.5 221 33.5
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 1.0e-22 112.5 234 32.1
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 1.4e-22 112.1 243 30.5
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 1.8e-22 111.7 246 30.5
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 1.8e-22 111.7 174 37.4
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 1.8e-22 111.7 183 35.0
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 1.8e-22 111.7 183 35.0
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 3.0e-22 110.9 167 35.9
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 3.9e-22 110.5 246 30.5
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 3.9e-22 110.5 164 36.6
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 5.1e-22 110.2 235 29.8
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 5.1e-22 110.2 168 36.3
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 5.1e-22 110.2 167 35.9
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 5.1e-22 110.2 240 32.1
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 5.1e-22 110.2 237 30.4
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 6.7e-22 109.8 189 34.4
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 8.8e-22 109.4 167 36.5
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 8.8e-22 109.4 234 31.6
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 8.8e-22 109.4 203 35.0
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 8.8e-22 109.4 239 31.0
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 1.1e-21 109.0 234 29.9
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 1.5e-21 108.6 194 34.0
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 1.5e-21 108.6 166 34.9
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 1.5e-21 108.6 167 37.1
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 1.5e-21 108.6 232 33.6
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 2.0e-21 108.2 173 35.8
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 2.0e-21 108.2 167 35.9
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 2.0e-21 108.2 250 32.4
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 2.6e-21 107.8 242 32.2
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 2.6e-21 107.8 202 33.7
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 4.4e-21 107.1 231 32.0
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 5.7e-21 106.7 237 31.2
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 5.7e-21 106.7 205 33.7
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 5.7e-21 106.7 253 30.0
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 7.4e-21 106.3 237 29.5
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 7.4e-21 106.3 167 35.3
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 7.4e-21 106.3 228 30.7
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 9.7e-21 105.9 225 32.0
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 9.7e-21 105.9 169 37.3
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 9.7e-21 105.9 240 29.6
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 9.7e-21 105.9 257 31.5
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 9.7e-21 105.9 192 33.3
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 1.3e-20 105.5 246 29.7
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 1.3e-20 105.5 230 29.6
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 1.7e-20 105.1 196 34.2
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 1.7e-20 105.1 256 29.3
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 1.7e-20 105.1 161 33.5
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 2.2e-20 104.8 205 34.1
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 2.8e-20 104.4 196 33.2
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 2.8e-20 104.4 236 31.8
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 2.8e-20 104.4 162 37.7
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 4.8e-20 103.6 196 33.7
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 4.8e-20 103.6 247 30.4
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 6.3e-20 103.2 231 29.9
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 1.1e-19 102.4 241 31.1
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 1.4e-19 102.1 234 29.9
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 1.8e-19 101.7 245 31.0
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 2.4e-19 101.3 167 38.3
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 2.4e-19 101.3 227 31.7
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 4.1e-19 100.5 209 32.1
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 5.3e-19 100.1 243 31.3
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 5.3e-19 100.1 243 31.3
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 9.1e-19 99.4 253 29.2
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 9.1e-19 99.4 238 31.9
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 1.5e-18 98.6 165 39.4
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 2.6e-18 97.8 236 30.1
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 4.5e-18 97.1 210 32.4
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 7.7e-18 96.3 232 31.0
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 1.3e-17 95.5 125 42.4
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 8.5e-17 92.8 211 30.3
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 1.9e-16 91.7 250 26.8
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 5.5e-16 90.1 240 29.6
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 2.1e-15 88.2 129 36.4
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 6.1e-15 86.7 147 36.1
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 1.1e-11 75.9 174 30.5
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 1.3e-09 68.9 76 42.1
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 2.1e-07 61.6 177 27.1
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 2.1e-07 61.6 177 27.1


User provided reference genes

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