Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.3e-134 483.0 240 100.0
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 9.7e-114 413.7 240 87.9
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 9.9e-42 174.5 238 41.2
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 3.0e-38 162.9 227 40.1
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.5e-37 160.6 213 41.3
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 1.3e-36 157.5 211 42.2
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 1.3e-36 157.5 195 43.1
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 1.3e-36 157.5 233 37.8
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 1.3e-36 157.5 233 37.8
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 2.8e-36 156.4 228 39.5
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 2.8e-36 156.4 234 38.9
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 8.2e-36 154.8 205 40.0
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.4e-35 154.1 230 36.1
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 1.4e-35 154.1 237 37.6
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 1.8e-35 153.7 214 37.9
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 1.8e-35 153.7 214 37.9
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 1.8e-35 153.7 236 38.6
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 3.1e-35 152.9 215 40.5
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 6.9e-35 151.8 202 39.6
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 6.9e-35 151.8 242 37.6
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 9.0e-35 151.4 222 37.8
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 1.5e-34 150.6 193 40.9
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 1.5e-34 150.6 232 39.7
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 1.5e-34 150.6 232 37.5
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 1.5e-34 150.6 241 37.3
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 2.0e-34 150.2 236 37.3
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 2.6e-34 149.8 237 36.7
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 3.4e-34 149.4 235 37.9
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 3.4e-34 149.4 205 40.0
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 4.5e-34 149.1 202 40.1
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 5.8e-34 148.7 211 37.9
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 1.0e-33 147.9 203 41.4
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.0e-33 147.9 213 37.6
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 1.0e-33 147.9 213 37.6
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 1.0e-33 147.9 227 37.9
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 1.3e-33 147.5 240 35.4
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 1.3e-33 147.5 222 36.9
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 1.7e-33 147.1 205 38.5
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 1.7e-33 147.1 221 39.8
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 2.9e-33 146.4 208 38.5
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 2.9e-33 146.4 203 40.4
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 2.9e-33 146.4 221 39.4
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 4.9e-33 145.6 164 45.7
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 4.9e-33 145.6 219 37.0
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 6.5e-33 145.2 279 34.8
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 6.5e-33 145.2 234 37.2
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 6.5e-33 145.2 211 38.4
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.1e-32 144.4 215 36.7
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.1e-32 144.4 211 37.4
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.1e-32 144.4 238 36.1
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 1.4e-32 144.1 239 38.9
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 1.4e-32 144.1 208 36.5
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 1.9e-32 143.7 239 35.1
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 1.9e-32 143.7 214 38.3
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 1.9e-32 143.7 213 37.6
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 2.5e-32 143.3 235 35.7
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 3.2e-32 142.9 241 37.8
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 3.2e-32 142.9 233 35.2
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 4.2e-32 142.5 207 37.7
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 4.2e-32 142.5 207 37.7
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 5.5e-32 142.1 214 37.4
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 7.1e-32 141.7 238 35.7
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 7.1e-32 141.7 240 37.5
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 9.3e-32 141.4 240 35.4
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 9.3e-32 141.4 212 39.2
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 9.3e-32 141.4 206 37.9
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 1.6e-31 140.6 218 36.2
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.1e-31 140.2 203 37.4
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 2.1e-31 140.2 203 37.4
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 2.7e-31 139.8 242 33.5
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 6.0e-31 138.7 207 37.2
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 6.0e-31 138.7 216 38.0
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 7.9e-31 138.3 214 38.3
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 7.9e-31 138.3 224 32.6
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 1.0e-30 137.9 204 38.2
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 1.3e-30 137.5 227 36.1
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 2.3e-30 136.7 228 35.5
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 2.3e-30 136.7 232 36.6
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 3.9e-30 136.0 204 37.7
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 3.9e-30 136.0 204 37.7
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 5.1e-30 135.6 204 37.7
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 5.1e-30 135.6 204 37.3
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 6.7e-30 135.2 208 37.5
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 6.7e-30 135.2 232 35.3
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 6.7e-30 135.2 207 37.7
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 8.7e-30 134.8 225 36.0
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 8.7e-30 134.8 205 37.6
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 1.1e-29 134.4 226 35.4
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 1.1e-29 134.4 192 38.5
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 1.1e-29 134.4 195 36.4
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 4.3e-29 132.5 182 41.2
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 7.4e-29 131.7 231 35.9
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 1.6e-28 130.6 189 38.6
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 3.7e-28 129.4 210 36.2
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 3.7e-28 129.4 226 35.0
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 4.8e-28 129.0 159 42.1
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 9.0e-27 124.8 247 32.0
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 4.5e-26 122.5 178 38.8
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 5.9e-26 122.1 278 31.7
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 1.9e-24 117.1 181 37.0
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 1.6e-23 114.0 138 42.8
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 3.6e-23 112.8 173 38.7
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 4.3e-21 105.9 105 45.7
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 5.7e-21 105.5 165 38.8
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 1.7e-20 104.0 106 45.3
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 2.8e-20 103.2 100 50.0
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 3.7e-20 102.8 286 27.6
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 4.4e-13 79.3 90 42.2
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.3e-12 77.8 99 46.5
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 2.5e-08 63.5 82 39.0


User provided reference genes

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