Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO116G0138 Selaginella moellendorffii HOM05D003658 ORTHO05D004457 1.4e-136 489.6 240 100.0
SMO116G0226 Selaginella moellendorffii HOM05D003658 ORTHO05D004457 3.7e-36 156.0 134 64.2
Nn2g13001 Nelumbo nucifera HOM05D003658 ORTHO05D004457 7.9e-31 138.3 135 56.3
Mapoly0126s0034 Marchantia polymorpha HOM05D003658 ORTHO05D004457 3.9e-30 136.0 177 45.2
Nn3g19734 Nelumbo nucifera HOM05D003658 ORTHO05D004457 6.7e-30 135.2 134 56.0
THA.LOC104800615 Tarenaya hassleriana HOM05D003658 ORTHO05D004457 1.9e-29 133.7 135 52.6
Pp3c1_18250 Physcomitrium patens HOM05D003658 ORTHO05D004457 3.3e-29 132.9 135 54.8
Cc10_g16400 Coffea canephora HOM05D003658 ORTHO05D004457 4.3e-29 132.5 135 54.1
MBI17_g19523_MAGBIO Magnolia biondii HOM05D003658 ORTHO05D004457 5.7e-29 132.1 135 54.8
Haze_23933 Corylus avellana HOM05D003658 ORTHO05D004457 7.4e-29 131.7 135 53.3
Aqoxy7G00983 Aquilegia oxysepala HOM05D003658 ORTHO05D004457 9.7e-29 131.3 135 53.3
arahy.Tifrunner.gnm1.ann1.F0P9EH Arachis hypogaea HOM05D003658 ORTHO05D004457 9.7e-29 131.3 184 42.9
Gohir.D01G046800 Gossypium hirsutum HOM05D003658 ORTHO05D004457 9.7e-29 131.3 135 52.6
Gorai.002G066300 Gossypium raimondii HOM05D003658 ORTHO05D004457 9.7e-29 131.3 135 52.6
Actinidia24075 Actinidia chinensis HOM05D003658 ORTHO05D004457 1.3e-28 131.0 158 46.8
Gohir.A01G060300 Gossypium hirsutum HOM05D003658 ORTHO05D004457 1.3e-28 131.0 135 52.6
Hund30148 Selenicereus undatus HOM05D003658 ORTHO05D004457 1.6e-28 130.6 135 51.9
Hund30149 Selenicereus undatus HOM05D003658 ORTHO05D004457 1.6e-28 130.6 135 51.9
Thecc.07G099900 Theobroma cacao HOM05D003658 ORTHO05D004457 1.6e-28 130.6 135 52.6
arahy.Tifrunner.gnm1.ann1.YNZQ4S Arachis hypogaea HOM05D003658 ORTHO05D004457 2.2e-28 130.2 135 53.3
ClCG09G021680 Citrullus lanatus HOM05D003658 ORTHO05D004457 2.2e-28 130.2 135 52.6
MELO3C013218.2 Cucumis melo HOM05D003658 ORTHO05D004457 2.2e-28 130.2 135 52.6
AagrBONN_evm.TU.Sc2ySwM_228.578 Anthoceros agrestis HOM05D003658 ORTHO05D004457 2.8e-28 129.8 135 51.9
AL1G43750 Arabidopsis lyrata HOM05D003658 ORTHO05D004457 2.8e-28 129.8 178 43.8
CiPaw.13G106400 Carya illinoinensis HOM05D003658 ORTHO05D004457 2.8e-28 129.8 184 44.0
Duzib170G0243 Durio zibethinus HOM05D003658 ORTHO05D004457 2.8e-28 129.8 135 51.9
Thhalv10006598m.g Eutrema salsugineum HOM05D003658 ORTHO05D004457 2.8e-28 129.8 177 44.1
Sp1g25780 Schrenkiella parvula HOM05D003658 ORTHO05D004457 2.8e-28 129.8 177 44.1
TAR369G0890 Trochodendron aralioides HOM05D003658 ORTHO05D004457 2.8e-28 129.8 135 53.3
AT1G29900 Arabidopsis thaliana HOM05D003658 ORTHO05D004457 3.7e-28 129.4 178 43.8
Carub.0001s2812 Capsella rubella HOM05D003658 ORTHO05D004457 3.7e-28 129.4 178 44.4
Actinidia03749 Actinidia chinensis HOM05D003658 ORTHO05D004457 4.8e-28 129.0 135 52.6
arahy.Tifrunner.gnm1.ann1.1XIG7Z Arachis hypogaea HOM05D003658 ORTHO05D004457 4.8e-28 129.0 135 53.3
arahy.Tifrunner.gnm1.ann1.HT4L1Y Arachis hypogaea HOM05D003658 ORTHO05D004457 4.8e-28 129.0 135 53.3
arahy.Tifrunner.gnm1.ann1.Z66RMF Arachis hypogaea HOM05D003658 ORTHO05D004457 4.8e-28 129.0 135 53.3
CARHR029540 Cardamine hirsuta HOM05D003658 ORTHO05D004457 4.8e-28 129.0 178 43.8
Duzib213G0488 Durio zibethinus HOM05D003658 ORTHO05D004457 4.8e-28 129.0 135 52.6
GSVIVG01025125001 Vitis vinifera HOM05D003658 ORTHO05D004457 4.8e-28 129.0 135 52.6
CsaV3_7G021350 Cucumis sativus L. HOM05D003658 ORTHO05D004457 6.3e-28 128.6 135 52.6
Medtr2g093280 Medicago truncatula HOM05D003658 ORTHO05D004457 6.3e-28 128.6 134 53.7
Nitab4.5_0000106g0020 Nicotiana tabacum HOM05D003658 ORTHO05D004457 6.3e-28 128.6 135 52.6
Nitab4.5_0010336g0040 Nicotiana tabacum HOM05D003658 ORTHO05D004457 6.3e-28 128.6 135 52.6
PSO782G2702 Papaver somniferum HOM05D003658 ORTHO05D004457 6.3e-28 128.6 177 44.6
PGR031G3879 Punica granatum HOM05D003658 ORTHO05D004457 6.3e-28 128.6 135 52.6
QL01p036935 Quercus lobata HOM05D003658 ORTHO05D004457 6.3e-28 128.6 177 44.6
Sed0019661 Sechium edule HOM05D003658 ORTHO05D004457 6.3e-28 128.6 135 51.9
Cfa011371 Carpinus fangiana HOM05D003658 ORTHO05D004457 8.2e-28 128.3 135 51.9
RcHm_v2.0_Chr2g0124141 Rosa chinensis HOM05D003658 ORTHO05D004457 8.2e-28 128.3 135 52.6
THA.LOC104826356 Tarenaya hassleriana HOM05D003658 ORTHO05D004457 8.2e-28 128.3 135 51.1
Atru.chr3.3712 Acer truncatum HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 51.9
arahy.Tifrunner.gnm1.ann1.SY27G3 Arachis hypogaea HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 53.3
Glyma.15G045100 Glycine max HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 52.6
HanXRQChr15g0493841 Helianthus annuus HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 51.9
Nitab4.5_0010960g0010 Nicotiana tabacum HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 52.6
Phvul.005G137400 Phaseolus vulgaris HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 52.6
Prupe.6G093800 Prunus persica HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 52.6
Sed0011385 Sechium edule HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 52.6
unitig_8.g4304 Utricularia gibba HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 52.6
VMungo1080G1458 Vigna mungo HOM05D003658 ORTHO05D004457 1.1e-27 127.9 135 52.6
MSTRG.22380 Avicennia marina HOM05D003658 ORTHO05D004457 1.4e-27 127.5 135 51.9
MSTRG.24196 Avicennia marina HOM05D003658 ORTHO05D004457 1.4e-27 127.5 135 52.6
BcaB07g32573 Brassica carinata HOM05D003658 ORTHO05D004457 1.4e-27 127.5 178 44.9
CSS0000103 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 1.4e-27 127.5 135 51.1
CSS0002392 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 1.4e-27 127.5 135 51.1
Lsat_1_v5_gn_9_7920 Lactuca sativa HOM05D003658 ORTHO05D004457 1.4e-27 127.5 135 51.1
Lalb_Chr24g0394441 Lupinus albus HOM05D003658 ORTHO05D004457 1.4e-27 127.5 134 53.7
Peaxi162Scf00072g00510 Petunia axillaris HOM05D003658 ORTHO05D004457 1.4e-27 127.5 135 52.6
Glyma.13G328600 Glycine max HOM05D003658 ORTHO05D004457 1.8e-27 127.1 134 53.0
Lj3g0017853 Lotus japonicus HOM05D003658 ORTHO05D004457 1.8e-27 127.1 135 52.6
Pp3c2_19430 Physcomitrium patens HOM05D003658 ORTHO05D004457 1.8e-27 127.1 177 43.5
Sc12g0008310 Simmondsia chinensis HOM05D003658 ORTHO05D004457 1.8e-27 127.1 135 51.1
CSS0048503 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 2.4e-27 126.7 177 43.5
AUR62004284 Chenopodium quinoa HOM05D003658 ORTHO05D004457 2.4e-27 126.7 135 50.4
COL.COLO4_32786 Corchorus olitorius HOM05D003658 ORTHO05D004457 2.4e-27 126.7 135 49.6
FAN26G3193 Fragaria x ananassa HOM05D003658 ORTHO05D004457 2.4e-27 126.7 177 44.1
PGSC0003DMG400007504 Solanum tuberosum HOM05D003658 ORTHO05D004457 2.4e-27 126.7 135 51.9
TWI75G0848 Tripterygium wilfordii HOM05D003658 ORTHO05D004457 2.4e-27 126.7 135 51.1
TAR623G0185 Trochodendron aralioides HOM05D003658 ORTHO05D004457 2.4e-27 126.7 135 52.6
AUR62033373 Chenopodium quinoa HOM05D003658 ORTHO05D004457 3.1e-27 126.3 135 50.4
Ca_01436_v3 Cicer arietinum L. HOM05D003658 ORTHO05D004457 3.1e-27 126.3 134 53.7
Lalb_Chr14g0374811 Lupinus albus HOM05D003658 ORTHO05D004457 3.1e-27 126.3 134 52.2
Manes.04G025400 Manihot esculenta HOM05D003658 ORTHO05D004457 3.1e-27 126.3 177 44.6
Psat5g277200 Pisum sativum HOM05D003658 ORTHO05D004457 3.1e-27 126.3 134 52.2
Aa31LG4G17270 Aethionema arabicum HOM05D003658 ORTHO05D004457 4.1e-27 125.9 134 50.7
Oeu046772.1 Olea europaea HOM05D003658 ORTHO05D004457 4.1e-27 125.9 135 51.9
RcHm_v2.0_Chr7g0219181 Rosa chinensis HOM05D003658 ORTHO05D004457 4.1e-27 125.9 135 51.9
Solyc06g075340.4 Solanum lycopersicum HOM05D003658 ORTHO05D004457 4.1e-27 125.9 135 51.9
Sopen06g031760 Solanum pennellii HOM05D003658 ORTHO05D004457 4.1e-27 125.9 135 51.9
ECA234G0865 Erigeron canadensis HOM05D003658 ORTHO05D004457 5.3e-27 125.6 135 51.9
TPR.G11612 Trifolium pratense HOM05D003658 ORTHO05D004457 5.3e-27 125.6 134 53.0
vmacro14471 Vaccinium macrocarpon HOM05D003658 ORTHO05D004457 5.3e-27 125.6 135 49.6
BraA09t39180Z Brassica rapa HOM05D003658 ORTHO05D004457 6.9e-27 125.2 178 43.8
FvH4_1g25660 Fragaria vesca HOM05D003658 ORTHO05D004457 6.9e-27 125.2 177 43.5
SalBow6G4004 Salvia bowleyana HOM05D003658 ORTHO05D004457 6.9e-27 125.2 135 52.6
SGA_v2.0_scaffold19G08651 Striga asiatica HOM05D003658 ORTHO05D004457 6.9e-27 125.2 135 51.1
TWI31G0613 Tripterygium wilfordii HOM05D003658 ORTHO05D004457 6.9e-27 125.2 135 50.4
Zm00001eb160030 Zea mays HOM05D003658 ORTHO05D004457 6.9e-27 125.2 135 49.6
ATR0561G124 Amborella trichopoda HOM05D003658 ORTHO05D004457 9.0e-27 124.8 135 51.9
A09p36600 Brassica napus HOM05D003658 ORTHO05D004457 9.0e-27 124.8 178 43.8
CSS0031195 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 9.0e-27 124.8 177 42.9
CANSAT35G1266 Cannabis sativa HOM05D003658 ORTHO05D004457 9.0e-27 124.8 135 51.9
DCAR_026092 Daucus carota HOM05D003658 ORTHO05D004457 9.0e-27 124.8 177 42.9
HPP92_005503 Vanilla planifolia HOM05D003658 ORTHO05D004457 9.0e-27 124.8 135 51.1
Ciclev10027703m.g Citrus clementina HOM05D003658 ORTHO05D004457 1.2e-26 124.4 177 41.8
Migut.N03234 Erythranthe guttata HOM05D003658 ORTHO05D004457 1.2e-26 124.4 135 51.1
DCAR_016522 Daucus carota HOM05D003658 ORTHO05D004457 1.5e-26 124.0 135 51.1
Eucgr.F04457 Eucalyptus grandis HOM05D003658 ORTHO05D004457 1.5e-26 124.0 135 48.9
FAN28G2851 Fragaria x ananassa HOM05D003658 ORTHO05D004457 1.5e-26 124.0 177 43.5
HanXRQChr09g0251621 Helianthus annuus HOM05D003658 ORTHO05D004457 1.5e-26 124.0 135 50.4
Lalb_Chr22g0350161 Lupinus albus HOM05D003658 ORTHO05D004457 1.5e-26 124.0 184 41.8
MD11G1125100 Malus domestica HOM05D003658 ORTHO05D004457 1.5e-26 124.0 135 50.4
Oeu047812.2 Olea europaea HOM05D003658 ORTHO05D004457 2.6e-26 123.2 135 50.4
Zm00001eb356970 Zea mays HOM05D003658 ORTHO05D004457 3.4e-26 122.9 135 49.6
Rhsim01G0220800 Rhododendron simsii HOM05D003658 ORTHO05D004457 4.5e-26 122.5 135 48.9
EL10Ac1g00972 Beta vulgaris HOM05D003658 ORTHO05D004457 5.9e-26 122.1 135 51.1
Sabra10G0015500 Salix brachista HOM05D003658 ORTHO05D004457 7.6e-26 121.7 135 49.6
BcaC05g27003 Brassica carinata HOM05D003658 ORTHO05D004457 1.3e-25 120.9 178 42.7
C05p28660 Brassica napus HOM05D003658 ORTHO05D004457 1.3e-25 120.9 178 42.7
BolC5t31587H Brassica oleracea HOM05D003658 ORTHO05D004457 1.3e-25 120.9 178 42.7
Ah.05g175890 Amaranthus hybridus HOM05D003658 ORTHO05D004457 1.7e-25 120.6 135 48.1
CDE02G3705 Ceratophyllum demersum HOM05D003658 ORTHO05D004457 1.7e-25 120.6 184 41.3
Dinv32798 Davidia involucrata HOM05D003658 ORTHO05D004457 1.7e-25 120.6 208 40.4
Potri.010G023100 Populus trichocarpa HOM05D003658 ORTHO05D004457 1.7e-25 120.6 135 48.9
CDE08G0949 Ceratophyllum demersum HOM05D003658 ORTHO05D004457 3.8e-25 119.4 184 40.2
Lj4A607T48 Lonicera japonica HOM05D003658 ORTHO05D004457 5.0e-25 119.0 177 42.9
SHI06033 Sapria himalayana HOM05D003658 ORTHO05D004457 1.1e-24 117.9 144 44.4
Glyma.20G148781 Glycine max HOM05D003658 ORTHO05D004457 2.1e-23 113.6 128 50.8
Nitab4.5_0000816g0110 Nicotiana tabacum HOM05D003658 ORTHO05D004457 2.1e-23 113.6 131 48.9
Cre08.g358580 Chlamydomonas reinhardtii HOM05D003658 ORTHO05D004457 7.9e-23 111.7 185 39.5
MCO07G210 Micromonas commoda HOM05D003658 ORTHO05D004457 5.1e-22 109.0 144 44.4
CBR_g16075 Chara braunii HOM05D003658 ORTHO05D004457 1.1e-21 107.8 140 46.4
PRCOL_00001523 Prasinoderma coloniale HOM05D003658 ORTHO05D004457 9.7e-21 104.8 135 42.2
Peaxi162Scf00809g00417 Petunia axillaris HOM05D003658 ORTHO05D004457 3.1e-19 99.8 98 52.0
MD03G1111400 Malus domestica HOM05D003658 ORTHO05D004457 6.9e-19 98.6 129 44.2
Cc01_g11620 Coffea canephora HOM05D003658 ORTHO05D004457 2.9e-17 93.2 135 44.4
Haze_26812 Corylus avellana HOM05D003658 ORTHO05D004457 3.9e-14 82.8 177 32.2
MBI17_g43655_MAGBIO Magnolia biondii HOM05D003658 ORTHO05D004457 1.7e-12 77.4 79 55.7
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 2.4e-11 73.6 101 40.6
Sc12g0005810 Simmondsia chinensis HOM05D003658 ORTHO05D004457 9.1e-11 71.6 49 65.3
Zm00001eb440860 Zea mays HOM05D003658 ORTHO05D004457 2.6e-10 70.1 79 46.8
Dinv14501 Davidia involucrata HOM05D003658 ORTHO05D004457 1.7e-09 67.4 116 37.1
Aqoxy84s009 Aquilegia oxysepala HOM05D003658 ORTHO05D004457 6.7e-06 55.5 54 42.6


User provided reference genes

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