Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 0.0e+00 2043.1 1044 100.0
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 1.1e-166 591.7 1235 36.4
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 6.2e-165 585.9 1241 36.1
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 2.1e-157 560.8 1190 37.1
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 2.0e-134 484.6 1198 34.5
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 1.8e-127 461.5 1218 33.6
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 1.5e-126 458.4 1224 33.1
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.8e-125 454.1 1220 32.9
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 3.7e-125 453.8 1224 32.9
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.1e-124 450.3 1241 32.5
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.7e-122 444.9 1209 33.1
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 2.2e-122 444.5 1492 28.7
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 5.0e-122 443.4 1419 29.0
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.5e-121 441.0 1134 33.6
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 2.5e-121 441.0 1235 31.7
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 3.3e-118 430.6 1243 31.9
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 7.7e-115 419.5 1208 31.9
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.0e-114 416.8 810 38.4
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 2.5e-113 414.5 1507 28.5
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 3.2e-113 414.1 1503 28.4
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 1.0e-111 409.1 1057 32.9
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 1.5e-110 405.2 1538 27.9
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 1.0e-106 392.5 1500 28.6
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 3.0e-103 380.9 1522 28.1
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 1.5e-102 378.6 795 37.2
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 4.4e-102 377.1 1116 31.4
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 5.7e-102 376.7 1189 29.6
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 4.9e-101 373.6 799 37.4
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 4.9e-101 373.6 1167 28.8
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 3.1e-100 370.9 1335 28.3
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 1.2e-99 369.0 1352 28.8
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 1.2e-99 369.0 1163 29.1
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 6.6e-98 363.2 1216 28.9
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 8.6e-98 362.8 962 32.8
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 1.5e-97 362.1 1126 30.6
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 3.3e-97 360.9 749 36.7
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 4.7e-96 357.1 1281 28.3
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 4.7e-96 357.1 785 37.7
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 4.0e-95 354.0 720 37.6
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 5.2e-95 353.6 1234 29.3
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 6.8e-95 353.2 727 37.0
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 8.9e-95 352.8 722 37.4
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 2.0e-94 351.7 791 34.1
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 2.0e-94 351.7 791 34.1
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 9.8e-94 349.4 1427 27.6
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 9.8e-94 349.4 1493 25.9
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 1.2e-88 332.4 702 35.3
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 1.6e-88 332.0 765 34.9
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 5.2e-87 327.0 1227 27.9
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 5.2e-87 327.0 1450 26.5
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 1.5e-86 325.5 635 38.1
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 3.4e-86 324.3 692 35.0
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 9.8e-86 322.8 1199 27.8
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 9.8e-86 322.8 739 35.0
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 3.7e-85 320.9 697 35.0
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 3.7e-85 320.9 713 35.6
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 1.9e-84 318.5 718 34.1
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 7.0e-84 316.6 699 34.8
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 1.2e-83 315.8 713 34.6
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 1.6e-83 315.5 824 32.4
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 3.5e-83 314.3 663 36.5
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 6.0e-83 313.5 662 35.5
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 3.9e-82 310.8 701 33.7
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 1.5e-81 308.9 768 31.9
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 4.7e-80 303.9 685 34.9
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 1.1e-79 302.8 832 31.6
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 8.9e-79 299.7 782 32.0
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 3.4e-78 297.7 703 33.7
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 1.3e-77 295.8 709 32.7
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 2.2e-77 295.0 691 33.3
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 2.4e-76 291.6 764 31.9
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 3.2e-76 291.2 686 33.1
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 2.7e-75 288.1 741 32.9
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 2.7e-75 288.1 722 33.4
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 2.7e-75 288.1 779 31.5
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 7.8e-75 286.6 720 33.5
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 1.0e-74 286.2 272 57.0
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 1.3e-74 285.8 649 33.7
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 1.7e-74 285.4 753 31.9
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 1.1e-73 282.7 691 33.1
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 1.1e-73 282.7 321 49.8
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 1.5e-73 282.3 760 31.6
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 1.9e-73 282.0 710 33.1
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 4.3e-73 280.8 706 32.3
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 5.6e-73 280.4 681 33.6
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 7.3e-73 280.0 692 32.9
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 1.2e-72 279.3 775 31.1
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 1.6e-72 278.9 707 31.7
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 1.6e-72 278.9 709 32.6
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 2.1e-72 278.5 706 31.9
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 2.4e-71 275.0 655 33.6
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 5.8e-70 270.4 697 33.4
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 2.2e-69 268.5 722 31.0
MD01G1200800 Malus domestica HOM05D005579 ORTHO05D006775 7.1e-68 263.5 1016 28.1
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 5.4e-60 237.3 271 49.1
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 3.9e-50 204.5 263 43.7
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 1.1e-49 203.0 1130 24.9
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 4.3e-49 201.1 262 43.1
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 4.2e-44 184.5 320 37.8
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 1.9e-41 175.6 274 41.2
Haze_13711 Corylus avellana HOM05D005579 ORTHO05D006775 4.5e-38 164.5 474 29.3
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 5.5e-36 157.5 146 58.2
FAN10G0535 Fragaria x ananassa HOM05D005579 ORTHO05D006775 3.7e-32 144.8 499 29.5
CDE08G0179 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 2.4e-31 142.1 544 29.4
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 2.0e-30 139.0 255 36.9
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 2.6e-30 138.7 430 27.7
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 8.8e-26 123.6 116 56.9
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 1.1e-25 123.2 317 30.9
Hund11748 Selenicereus undatus HOM05D005579 ORTHO05D006775 2.4e-23 115.5 480 26.2
Pp3c13_14750 Physcomitrium patens HOM05D005579 ORTHO05D006775 9.1e-23 113.6 258 30.6
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 1.6e-19 102.8 255 30.6
Ca_25744_v3 Cicer arietinum L. HOM05D005579 ORTHO05D006775 3.6e-19 101.7 310 28.7
MBI17_g46331_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 3.8e-13 81.6 182 33.0


User provided reference genes

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