Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34220 Sapria himalayana HOM05D001325 ORTHO05D001540 1.1e-46 189.5 91 100.0
SHI46908 Sapria himalayana HOM05D001325 ORTHO05D001540 2.5e-14 82.0 63 66.7
SHI51228 Sapria himalayana HOM05D001325 ORTHO05D001540 2.5e-14 82.0 63 66.7
SHI33930 Sapria himalayana HOM05D001325 ORTHO05D001540 4.3e-14 81.3 59 69.5
SHI36142 Sapria himalayana HOM05D001325 ORTHO05D001540 4.3e-14 81.3 43 86.0
SHI38206 Sapria himalayana HOM05D001325 ORTHO05D001540 4.3e-14 81.3 43 86.0
SHI54388 Sapria himalayana HOM05D001325 ORTHO05D001540 4.3e-14 81.3 42 88.1
SHI35326 Sapria himalayana HOM05D001325 ORTHO05D001540 5.7e-14 80.9 40 92.5
SHI35977 Sapria himalayana HOM05D000743 ORTHO05D000580 5.7e-14 80.9 40 92.5
SHI35980 Sapria himalayana HOM05D001325 ORTHO05D001540 5.7e-14 80.9 40 92.5
SHI36383 Sapria himalayana HOM05D001325 ORTHO05D001540 5.7e-14 80.9 40 92.5
SHI44670 Sapria himalayana HOM05D001325 ORTHO05D001540 5.7e-14 80.9 40 92.5
SHI49663 Sapria himalayana HOM05D001325 ORTHO05D001540 5.7e-14 80.9 40 92.5
SHI52150 Sapria himalayana HOM05D001325 ORTHO05D001540 5.7e-14 80.9 40 92.5
SHI43970 Sapria himalayana HOM05D001325 ORTHO05D001540 9.7e-14 80.1 63 65.1
SHI49994 Sapria himalayana HOM05D001325 ORTHO05D001540 9.7e-14 80.1 40 90.0
SHI50801 Sapria himalayana HOM05D001325 ORTHO05D001540 9.7e-14 80.1 40 90.0
SHI51700 Sapria himalayana HOM05D001325 ORTHO05D001540 9.7e-14 80.1 40 90.0
SHI53190 Sapria himalayana HOM05D001325 ORTHO05D001540 9.7e-14 80.1 40 90.0
SHI53369 Sapria himalayana HOM05D001325 ORTHO05D001540 9.7e-14 80.1 40 90.0
SHI53372 Sapria himalayana HOM05D001325 ORTHO05D001540 9.7e-14 80.1 40 90.0
SHI53577 Sapria himalayana HOM05D001325 ORTHO05D001540 9.7e-14 80.1 40 90.0
SHI36935 Sapria himalayana HOM05D001325 ORTHO05D001540 1.7e-13 79.3 39 92.3
SHI38210 Sapria himalayana HOM05D001325 ORTHO05D001540 2.2e-13 79.0 40 90.0
SHI49794 Sapria himalayana HOM05D001325 ORTHO05D001540 2.8e-13 78.6 55 69.1
SHI54219 Sapria himalayana HOM05D001325 ORTHO05D001540 2.8e-13 78.6 59 67.8
SHI41240 Sapria himalayana HOM05D001325 ORTHO05D001540 3.7e-13 78.2 40 90.0
SHI46260 Sapria himalayana HOM05D001325 ORTHO05D001540 3.7e-13 78.2 40 90.0
SHI48903 Sapria himalayana HOM05D001325 ORTHO05D001540 3.7e-13 78.2 40 90.0
SHI36567 Sapria himalayana HOM05D001325 ORTHO05D001540 4.8e-13 77.8 40 90.0
SHI53781 Sapria himalayana HOM05D001325 ORTHO05D001540 4.8e-13 77.8 40 90.0
SHI39812 Sapria himalayana HOM05D001325 ORTHO05D001540 6.3e-13 77.4 40 90.0
SHI35190 Sapria himalayana HOM05D001325 ORTHO05D001540 8.2e-13 77.0 59 67.8
SHI35334 Sapria himalayana HOM05D001325 ORTHO05D001540 8.2e-13 77.0 40 90.0
SHI36581 Sapria himalayana HOM05D001325 ORTHO05D001540 8.2e-13 77.0 38 92.1
SHI51658 Sapria himalayana HOM05D001325 ORTHO05D001540 1.1e-12 76.6 39 89.7
SHI54160 Sapria himalayana HOM05D001325 ORTHO05D001540 1.1e-12 76.6 43 79.1
Aqoxy12s039 Aquilegia oxysepala HOM05D001325 ORTHO05D001540 1.4e-12 76.3 40 87.5
Sed0022288 Sechium edule HOM05D001325 ORTHO05D001540 1.4e-12 76.3 40 87.5
Sed0024579 Sechium edule HOM05D001325 ORTHO05D001540 1.4e-12 76.3 40 87.5
SHI44576 Sapria himalayana HOM05D001325 ORTHO05D001540 1.8e-12 75.9 63 61.9
Hund27899 Selenicereus undatus HOM05D001325 ORTHO05D001540 2.4e-12 75.5 67 58.2
SHI36629 Sapria himalayana HOM05D001325 ORTHO05D001540 3.1e-12 75.1 40 87.5
SHI36771 Sapria himalayana HOM05D001325 ORTHO05D001540 3.1e-12 75.1 40 87.5
SHI36782 Sapria himalayana HOM05D001325 ORTHO05D001540 3.1e-12 75.1 40 87.5
SHI48150 Sapria himalayana HOM05D001325 ORTHO05D001540 3.1e-12 75.1 39 87.2
SHI51612 Sapria himalayana HOM05D001325 ORTHO05D001540 3.1e-12 75.1 40 87.5
CAN.G889.5 Capsicum annuum HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
DCAR_016146 Daucus carota HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
DCAR_032436 Daucus carota HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
SHI39777 Sapria himalayana HOM05D001325 ORTHO05D001540 4.1e-12 74.7 40 85.0
SHI42503 Sapria himalayana HOM05D001325 ORTHO05D001540 4.1e-12 74.7 40 85.0
Hund27587 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Hund27666 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Hund27817 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Hund28083 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Hund28867 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Hund28882 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Hund29085 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Hund29471 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Hund29893 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Sc03g0005010 Simmondsia chinensis HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Sc04g0005520 Simmondsia chinensis HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
Sopen00g002640 Solanum pennellii HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
PGSC0003DMG400021744 Solanum tuberosum HOM05D001325 ORTHO05D001540 4.1e-12 74.7 39 87.2
SHI00829 Sapria himalayana HOM05D001325 ORTHO05D001540 5.3e-12 74.3 40 87.5
arahy.Tifrunner.gnm1.ann1.2YD7KU Arachis hypogaea HOM05D001325 ORTHO05D001540 6.9e-12 73.9 40 85.0
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 6.9e-12 73.9 40 85.0
arahy.Tifrunner.gnm1.ann1.TPY4ZQ Arachis hypogaea HOM05D001325 ORTHO05D001540 6.9e-12 73.9 40 85.0
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 6.9e-12 73.9 40 85.0
arahy.Tifrunner.gnm1.ann1.XXM48B Arachis hypogaea HOM05D001325 ORTHO05D001540 6.9e-12 73.9 40 85.0
LjContig00315g0013534 Lotus japonicus HOM05D001325 ORTHO05D001540 6.9e-12 73.9 40 85.0
PGR028G0006 Punica granatum HOM05D001325 ORTHO05D001540 6.9e-12 73.9 40 85.0
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.2e-11 73.2 39 84.6
SHI49107 Sapria himalayana HOM05D001325 ORTHO05D001540 1.2e-11 73.2 39 87.2
Lalb_Chr17g0337391 Lupinus albus HOM05D001325 ORTHO05D001540 1.5e-11 72.8 75 53.3
SHI49748 Sapria himalayana HOM05D001325 ORTHO05D001540 1.5e-11 72.8 40 82.5
Lalb_Chr00c24g0406961 Lupinus albus HOM05D001325 ORTHO05D001540 2.0e-11 72.4 78 51.3
CDE02G2710 Ceratophyllum demersum HOM05D001325 ORTHO05D001540 2.6e-11 72.0 39 84.6
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 2.6e-11 72.0 39 84.6
MBI06_g25391_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 2.6e-11 72.0 39 84.6
MBI10_g41321_MAGBIO Magnolia biondii HOM05D001325 ORTHO05D001540 2.6e-11 72.0 39 84.6
SHI40461 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-11 72.0 39 84.6
SHI43533 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-11 72.0 68 61.8
Medtr0082s0040 Medicago truncatula HOM05D001325 ORTHO05D001540 3.4e-11 71.6 40 82.5
Nitab4.5_0005853g0080 Nicotiana tabacum HOM05D001325 ORTHO05D001540 4.5e-11 71.2 65 60.0
Sc16g0005190 Simmondsia chinensis HOM05D001325 ORTHO05D011945 4.5e-11 71.2 60 63.3
HanXRQChr00c0055g0571461 Helianthus annuus HOM05D001325 ORTHO05D001540 5.9e-11 70.9 39 82.1
HanXRQChr01g0017121 Helianthus annuus HOM05D001325 ORTHO05D001540 5.9e-11 70.9 39 82.1
HanXRQChr10g0305211 Helianthus annuus HOM05D001325 ORTHO05D001540 5.9e-11 70.9 39 82.1
HanXRQChr16g0504411 Helianthus annuus HOM05D001325 ORTHO05D001540 5.9e-11 70.9 39 82.1
HanXRQMTg0579641 Helianthus annuus HOM05D001325 ORTHO05D001540 5.9e-11 70.9 39 82.1
Lsat_1_v5_gn_1_24001 Lactuca sativa HOM05D001325 ORTHO05D001540 5.9e-11 70.9 39 82.1
BNapus_Darmor_BZH_scaffold_234p00060 Brassica napus HOM05D001325 ORTHO05D001540 7.7e-11 70.5 39 82.1
BolSC28t60355H Brassica oleracea HOM05D001325 ORTHO05D001540 7.7e-11 70.5 39 82.1
BraSC48t46256Z Brassica rapa HOM05D001325 ORTHO05D001540 7.7e-11 70.5 39 82.1
BraSC77t46665Z Brassica rapa HOM05D001325 ORTHO05D001540 7.7e-11 70.5 39 82.1
FvH4_5g00530 Fragaria vesca HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
FvH4_7g21740 Fragaria vesca HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
FAN03G1410 Fragaria x ananassa HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
FAN06G1419 Fragaria x ananassa HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
FAN06G2328 Fragaria x ananassa HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
FAN08G2386 Fragaria x ananassa HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
FAN10G4039 Fragaria x ananassa HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
FAN18G4430 Fragaria x ananassa HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
PGR031G1129 Punica granatum HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
RcHm_v2.0_Chr5g0080691 Rosa chinensis HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
RcHm_v2.0_Chr7g0201871 Rosa chinensis HOM05D001325 ORTHO05D001540 7.7e-11 70.5 40 77.5
SHI54131 Sapria himalayana HOM05D001325 ORTHO05D001540 7.7e-11 70.5 34 91.2
AL3G44440 Arabidopsis lyrata HOM05D001325 ORTHO05D001540 1.0e-10 70.1 39 82.1
AT2G07675 Arabidopsis thaliana HOM05D001325 ORTHO05D001540 1.0e-10 70.1 39 82.1
ATMG00980 Arabidopsis thaliana HOM05D001325 ORTHO05D001540 1.0e-10 70.1 39 82.1
arahy.Tifrunner.gnm1.ann1.ALHF99 Arachis hypogaea HOM05D001325 ORTHO05D001540 1.0e-10 70.1 40 82.5
MSTRG.3525 Avicennia marina HOM05D001325 ORTHO05D001540 2.2e-10 68.9 40 77.5
FAN13G1785 Fragaria x ananassa HOM05D001325 ORTHO05D001540 2.2e-10 68.9 40 75.0
PSO170G5129 Papaver somniferum HOM05D001325 ORTHO05D001540 2.2e-10 68.9 40 75.0
PSO357G0201 Papaver somniferum HOM05D001325 ORTHO05D001540 2.2e-10 68.9 40 75.0
RcHm_v2.0_MTg0498391 Rosa chinensis HOM05D001325 ORTHO05D001540 2.2e-10 68.9 39 82.1
unitig_87.g28032 Utricularia gibba HOM05D001325 ORTHO05D001540 2.2e-10 68.9 40 77.5
CARHR283240 Cardamine hirsuta HOM05D001325 ORTHO05D001540 2.9e-10 68.6 39 79.5
COL.COLO4_04481 Corchorus olitorius HOM05D001325 ORTHO05D001540 2.9e-10 68.6 40 77.5
HanXRQChr10g0297181 Helianthus annuus HOM05D001325 ORTHO05D001540 2.9e-10 68.6 58 60.3
Lsat_1_v5_gn_5_16521 Lactuca sativa HOM05D001325 ORTHO05D001540 2.9e-10 68.6 39 76.9
SHI48751 Sapria himalayana HOM05D001325 ORTHO05D001540 3.8e-10 68.2 37 83.8
HanXRQChr08g0236211 Helianthus annuus HOM05D001325 ORTHO05D001540 5.0e-10 67.8 57 59.6
SHI34613 Sapria himalayana HOM05D001325 ORTHO05D001540 4.2e-09 64.7 37 75.7
VMungo1309G2626 Vigna mungo HOM05D001325 ORTHO05D001540 4.2e-09 64.7 40 77.5
Oeu040255.1 Olea europaea HOM05D001325 ORTHO05D001540 5.5e-09 64.3 39 71.8
AagrBONN_evm.TU.Sc2ySwM_344.1250 Anthoceros agrestis HOM05D001325 ORTHO05D001540 9.4e-09 63.5 40 70.0
Nitab4.5_0001788g0300 Nicotiana tabacum HOM05D001325 ORTHO05D001540 1.6e-08 62.8 30 93.3
SMO116G0334 Selaginella moellendorffii HOM05D001325 ORTHO05D001540 1.6e-08 62.8 40 67.5
Nitab4.5_0001796g0270 Nicotiana tabacum HOM05D001325 ORTHO05D001540 6.1e-08 60.8 29 93.1
SHI38315 Sapria himalayana HOM05D001325 ORTHO05D001540 7.9e-08 60.5 40 72.5
COL.COLO4_02562 Corchorus olitorius HOM05D001325 ORTHO05D001540 1.4e-07 59.7 40 62.5
Haze_27062 Corylus avellana HOM05D001325 ORTHO05D001540 2.3e-07 58.9 40 65.0
SHI42173 Sapria himalayana HOM05D001325 ORTHO05D001540 3.0e-07 58.5 29 89.7
SMO364G0929 Selaginella moellendorffii HOM05D001325 ORTHO05D001540 3.0e-07 58.5 40 65.0
Lsat_1_v5_gn_9_49240 Lactuca sativa HOM05D000533 ORTHO05D001069 8.8e-07 57.0 29 86.2
Nitab4.5_0002716g0110 Nicotiana tabacum HOM05D001325 ORTHO05D001540 8.8e-07 57.0 39 71.8
SHI15029 Sapria himalayana HOM05D001325 ORTHO05D001540 8.8e-07 57.0 35 74.3
MELO3C003986.2 Cucumis melo HOM05D001325 ORTHO05D001540 1.5e-06 56.2 43 55.8
SHI39476 Sapria himalayana HOM05D001325 ORTHO05D001540 1.5e-06 56.2 27 92.6
SGA_v2.0_scaffold255G45513 Striga asiatica HOM05D001325 ORTHO05D001540 1.5e-06 56.2 55 50.9
Medtr7g055840 Medicago truncatula HOM05D001325 ORTHO05D001540 2.0e-06 55.8 62 43.5
CARHR287250 Cardamine hirsuta HOM05D001325 ORTHO05D001540 2.6e-06 55.5 32 78.1
Gohir.1Z050302 Gossypium hirsutum HOM05D001325 ORTHO05D001540 4.4e-06 54.7 40 57.5
Manes.08G083670 Manihot esculenta HOM05D001325 ORTHO05D001540 4.4e-06 54.7 32 75.0
Medtr0625s0020 Medicago truncatula HOM05D001325 ORTHO05D001540 5.7e-06 54.3 40 57.5
ATCG00905 Arabidopsis thaliana HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
ATCG01230 Arabidopsis thaliana HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
arahy.Tifrunner.gnm1.ann1.4LX9HH Arachis hypogaea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
arahy.Tifrunner.gnm1.ann1.ASG6ZP Arachis hypogaea HOM05D000729 ORTHO05D002596 9.7e-06 53.5 40 57.5
arahy.Tifrunner.gnm1.ann1.G5DDSF Arachis hypogaea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
arahy.Tifrunner.gnm1.ann1.IYH8UQ Arachis hypogaea HOM05D000729 ORTHO05D002596 9.7e-06 53.5 40 57.5
arahy.Tifrunner.gnm1.ann1.JN64LG Arachis hypogaea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
arahy.Tifrunner.gnm1.ann1.T7VYQ6 Arachis hypogaea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
arahy.Tifrunner.gnm1.ann1.ZY6KWR Arachis hypogaea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
EL10Ac9g21012 Beta vulgaris HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BcaB03g16403 Brassica carinata HOM05D000729 ORTHO05D002596 9.7e-06 53.5 40 57.5
BNapus_Darmor_BZH_scaffold_147p00040 Brassica napus HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
C06p21310 Brassica napus HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
C06p23120 Brassica napus HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BolSC29t60558H Brassica oleracea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BolSC29t60626H Brassica oleracea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BolSC35t60716H Brassica oleracea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BolSC45t60921H Brassica oleracea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BolSC47t61057H Brassica oleracea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BolSC47t61069H Brassica oleracea HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BraSC103t45495Z Brassica rapa HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BraSC138t45523Z Brassica rapa HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BraSC143t45667Z Brassica rapa HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BraSC58t46451Z Brassica rapa HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
BraSC59t46559Z Brassica rapa HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
CARHR282350 Cardamine hirsuta HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
ClCG07G005850 Citrullus lanatus HOM05D000004 ORTHO05D000002 9.7e-06 53.5 40 57.5
MELO3C000106.2 Cucumis melo HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
CsaV3_UNG210040 Cucumis sativus L. HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
FvH4_c3g00110 Fragaria vesca HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
Medtr0002s0280 Medicago truncatula HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
Medtr3g035660 Medicago truncatula HOM05D000729 ORTHO05D001063 9.7e-06 53.5 40 57.5
Nitab4.5_0000692g0250 Nicotiana tabacum HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
Phvul.009G090248 Phaseolus vulgaris HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
Sed0003644 Sechium edule HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
Sed0005985 Sechium edule HOM05D000729 ORTHO05D001540 9.7e-06 53.5 40 57.5
VMungo0464G0583 Vigna mungo HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5
VMungo0580G0002 Vigna mungo HOM05D001325 ORTHO05D001540 9.7e-06 53.5 40 57.5


User provided reference genes

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