Gene: ATCG00905
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier ATCG00905
- Transcript Identifier ATCG00905.1
- Gene Type Coding gene
- Location ChrC : 97999-98793 : negative
Gene Family Information
- ID HOM05D001325
- #Genes/#Species 474/79
- Phylogenetic origin
- ID ORTHO05D001540
- #Genes/#Species 392/70
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid ATCG00905.1
- symbol RPS12C
- Alias RPS12,RIBOSOMAL PROTEIN S12
- uniprot P62126
Descriptions
- Description ribosomal protein S12C
- Computational description ribosomal protein S12C (RPS12C); CONTAINS InterPro DOMAIN/s: Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Ribosomal protein S12, bacterial-type (InterPro:IPR005679); BEST Arabidopsis thaliana protein match is: ribosomal protein S12B (TAIR:ATCG01230.1).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IBA IEA | GOA Database | translation | |
| GO:0006412 | TAS | Gene Ontology | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | TAS | Gene Ontology | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0019843 | IEA | GOA Database | rRNA binding | |
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009536 | HDA | Gene Ontology | plastid | 2 |
| GO:0015935 | IEA | GOA Database | small ribosomal subunit | |
| GO:0015935 | IEA | InterPro | small ribosomal subunit | |
| GO:0005840 | IBA IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0000312 | TAS | Gene Ontology | plastid small ribosomal subunit | |
| GO:0009534 | IDA | GOA Database | chloroplast thylakoid | |
| GO:0009570 | IDA | GOA Database | chloroplast stroma | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |