Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32173 Sapria himalayana HOM05D000070 ORTHO05D006627 5.8e-65 250.8 128 100.0
Manes.11G051180 Manihot esculenta HOM05D000070 ORTHO05D006627 7.7e-33 144.1 125 60.8
TWI09G1172 Tripterygium wilfordii HOM05D000070 ORTHO05D006627 1.3e-32 143.3 124 59.7
Potri.001G174100 Populus trichocarpa HOM05D000070 ORTHO05D006627 2.9e-32 142.1 125 59.2
Gohir.D10G048401 Gossypium hirsutum HOM05D000070 ORTHO05D006627 3.8e-32 141.7 125 58.4
Gorai.011G051500 Gossypium raimondii HOM05D000070 ORTHO05D006627 3.8e-32 141.7 125 58.4
Thecc.06G135300 Theobroma cacao HOM05D000070 ORTHO05D006627 1.1e-31 140.2 125 58.4
Phvul.002G100600 Phaseolus vulgaris HOM05D000070 ORTHO05D006627 5.5e-31 137.9 124 55.6
Sabra01G0137800 Salix brachista HOM05D000070 ORTHO05D006627 5.5e-31 137.9 125 57.6
COL.COLO4_30925 Corchorus olitorius HOM05D000070 ORTHO05D006627 9.4e-31 137.1 125 56.0
Cfa006373 Carpinus fangiana HOM05D000070 ORTHO05D006627 4.7e-30 134.8 126 59.5
Lj4g0001942 Lotus japonicus HOM05D000070 ORTHO05D006627 6.1e-30 134.4 131 54.2
Duzib192G0613 Durio zibethinus HOM05D000070 ORTHO05D006627 1.0e-29 133.7 125 55.2
Glyma.07G224000 Glycine max HOM05D000070 ORTHO05D006627 1.0e-29 133.7 126 55.6
Atru.chr10.621 Acer truncatum HOM05D000070 ORTHO05D006627 1.8e-29 132.9 124 54.8
Haze_04406 Corylus avellana HOM05D000070 ORTHO05D006627 1.8e-29 132.9 126 58.7
arahy.Tifrunner.gnm1.ann1.REAP7F Arachis hypogaea HOM05D000070 ORTHO05D006627 3.0e-29 132.1 126 57.9
CiPaw.02G023600 Carya illinoinensis HOM05D000070 ORTHO05D006627 3.9e-29 131.7 126 58.7
Prupe.4G112300 Prunus persica HOM05D000070 ORTHO05D006627 3.9e-29 131.7 124 56.5
arahy.Tifrunner.gnm1.ann1.UR3YMK Arachis hypogaea HOM05D000070 ORTHO05D006627 8.8e-29 130.6 126 57.1
Ciclev10014090m.g Citrus clementina HOM05D000070 ORTHO05D006627 8.8e-29 130.6 125 57.6
Psat7g132840 Pisum sativum HOM05D000070 ORTHO05D006627 8.8e-29 130.6 126 54.0
arahy.Tifrunner.gnm1.ann1.V5UDLG Arachis hypogaea HOM05D000070 ORTHO05D006627 1.5e-28 129.8 125 55.2
GSVIVG01013614001 Vitis vinifera HOM05D000070 ORTHO05D006627 4.4e-28 128.3 124 54.8
CsaV3_1G046740 Cucumis sativus L. HOM05D000070 ORTHO05D006627 1.7e-27 126.3 129 55.8
MD05G1251500 Malus domestica HOM05D000070 ORTHO05D006627 2.2e-27 125.9 124 55.6
PGR102G0872 Punica granatum HOM05D000070 ORTHO05D006627 2.8e-27 125.6 126 55.6
QL11p017850 Quercus lobata HOM05D000070 ORTHO05D006627 3.7e-27 125.2 126 55.6
FAN21G2030 Fragaria x ananassa HOM05D000070 ORTHO05D006627 6.3e-27 124.4 124 54.0
HanXRQChr02g0040551 Helianthus annuus HOM05D000070 ORTHO05D006627 6.3e-27 124.4 128 51.6
Lsat_1_v5_gn_1_6720 Lactuca sativa HOM05D000070 ORTHO05D006627 6.3e-27 124.4 128 53.1
MELO3C021783.2 Cucumis melo HOM05D000070 ORTHO05D006627 8.2e-27 124.0 129 55.0
FvH4_3g12310 Fragaria vesca HOM05D000070 ORTHO05D006627 1.1e-26 123.6 124 54.0
FAN16G1763 Fragaria x ananassa HOM05D000070 ORTHO05D006627 1.1e-26 123.6 124 54.0
Dinv05864 Davidia involucrata HOM05D000070 ORTHO05D006627 1.8e-26 122.9 124 54.8
TAR626G1726 Trochodendron aralioides HOM05D000070 ORTHO05D006627 1.8e-26 122.9 124 54.0
ClCG01G008970 Citrullus lanatus HOM05D000070 ORTHO05D006627 3.1e-26 122.1 129 55.8
vmacro20772 Vaccinium macrocarpon HOM05D000070 ORTHO05D006627 3.1e-26 122.1 129 53.5
Aqoxy1G01537 Aquilegia oxysepala HOM05D000070 ORTHO05D006627 4.1e-26 121.7 127 53.5
TPR.G9706 Trifolium pratense HOM05D000070 ORTHO05D006627 5.3e-26 121.3 125 50.4
EL10Ac2g02462 Beta vulgaris HOM05D000070 ORTHO05D006627 7.0e-26 120.9 125 51.2
Ca_18785_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006627 9.1e-26 120.6 125 51.2
Lalb_Chr05g0219821 Lupinus albus HOM05D000070 ORTHO05D006627 9.1e-26 120.6 126 54.8
Sed0014200 Sechium edule HOM05D000070 ORTHO05D006627 1.2e-25 120.2 125 53.6
Nn7g37939 Nelumbo nucifera HOM05D000070 ORTHO05D006627 1.5e-25 119.8 124 52.4
Medtr4g083460 Medicago truncatula HOM05D000070 ORTHO05D006627 3.5e-25 118.6 127 51.2
RcHm_v2.0_Chr5g0020121 Rosa chinensis HOM05D000070 ORTHO05D006627 5.9e-25 117.9 124 52.4
CANSAT35G0895 Cannabis sativa HOM05D000070 ORTHO05D006627 1.0e-24 117.1 126 52.4
Eucgr.E02009 Eucalyptus grandis HOM05D000070 ORTHO05D006627 2.9e-24 115.5 125 49.6
MBI01_g11418_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D006627 5.0e-24 114.8 125 50.4
PSO541G5972 Papaver somniferum HOM05D000070 ORTHO05D006627 5.0e-24 114.8 131 51.9
PSO675G1403 Papaver somniferum HOM05D000070 ORTHO05D006627 5.0e-24 114.8 130 50.8
Cc10_g13650 Coffea canephora HOM05D000070 ORTHO05D006627 1.9e-23 112.8 127 52.0
Sc07g0007670 Simmondsia chinensis HOM05D000070 ORTHO05D006627 2.5e-23 112.5 126 47.6
ECA247G0604 Erigeron canadensis HOM05D000070 ORTHO05D006627 9.4e-23 110.5 126 50.0
Nitab4.5_0000317g0130 Nicotiana tabacum HOM05D000070 ORTHO05D006627 9.4e-23 110.5 129 50.4
CDE02G2199 Ceratophyllum demersum HOM05D000070 ORTHO05D006627 1.2e-22 110.2 124 50.8
Lj4A674T64 Lonicera japonica HOM05D000070 ORTHO05D006627 1.2e-22 110.2 126 51.6
Nitab4.5_0003485g0060 Nicotiana tabacum HOM05D000070 ORTHO05D006627 3.6e-22 108.6 129 48.8
AUR62024782 Chenopodium quinoa HOM05D000070 ORTHO05D006627 6.1e-22 107.8 125 48.0
AUR62032439 Chenopodium quinoa HOM05D000070 ORTHO05D006627 6.1e-22 107.8 125 48.0
Thhalv10012497m.g Eutrema salsugineum HOM05D000070 ORTHO05D006627 8.0e-22 107.5 123 48.8
BcaB08g37256 Brassica carinata HOM05D000070 ORTHO05D006627 1.0e-21 107.1 123 48.0
Hund09412 Selenicereus undatus HOM05D000070 ORTHO05D006627 1.0e-21 107.1 127 45.7
CAN.G405.6 Capsicum annuum HOM05D000070 ORTHO05D006627 1.8e-21 106.3 128 46.9
Solyc04g057960.4 Solanum lycopersicum HOM05D000070 ORTHO05D006627 1.8e-21 106.3 128 47.7
Sopen04g025820 Solanum pennellii HOM05D000070 ORTHO05D006627 1.8e-21 106.3 128 47.7
Carub.0006s0739 Capsella rubella HOM05D000070 ORTHO05D006627 4.0e-21 105.1 123 48.0
SalBow7G2869 Salvia bowleyana HOM05D000070 ORTHO05D006627 5.2e-21 104.8 125 51.2
A10p28270 Brassica napus HOM05D000070 ORTHO05D006627 8.8e-21 104.0 123 47.2
BraA10t44876Z Brassica rapa HOM05D000070 ORTHO05D006627 8.8e-21 104.0 123 47.2
Sp6g34430 Schrenkiella parvula HOM05D000070 ORTHO05D006627 1.1e-20 103.6 123 47.2
C09p68530 Brassica napus HOM05D000070 ORTHO05D006627 1.5e-20 103.2 123 48.0
CARHR204530 Cardamine hirsuta HOM05D000070 ORTHO05D006627 1.5e-20 103.2 123 46.3
AT5G08470 Arabidopsis thaliana HOM05D000070 ORTHO05D006627 2.0e-20 102.8 123 46.3
SGA_v2.0_scaffold52G18907 Striga asiatica HOM05D000070 ORTHO05D006627 2.0e-20 102.8 126 49.2
BolC9t59597H Brassica oleracea HOM05D000070 ORTHO05D006627 4.4e-20 101.7 123 46.3
Zm00001eb176300 Zea mays HOM05D000070 ORTHO05D006627 1.3e-19 100.1 125 44.8
ATR0763G153 Amborella trichopoda HOM05D000070 ORTHO05D006627 1.7e-19 99.8 115 50.4
Migut.C01080 Erythranthe guttata HOM05D000070 ORTHO05D006627 2.2e-19 99.4 125 48.8
Aa31LG3G18070 Aethionema arabicum HOM05D000065 ORTHO05D006627 2.8e-19 99.0 112 47.3
Oeu040394.2 Olea europaea HOM05D000070 ORTHO05D006627 2.8e-19 99.0 126 46.8
Peaxi162Scf00066g00526 Petunia axillaris HOM05D000070 ORTHO05D006627 8.2e-19 97.4 114 50.0
Rhsim01G0112400 Rhododendron simsii HOM05D000070 ORTHO05D006627 1.8e-18 96.3 174 36.8
Actinidia01326 Actinidia chinensis HOM05D000070 ORTHO05D006627 3.1e-18 95.5 126 46.8
TPR.G24989 Trifolium pratense HOM05D056525 ORTHO05D006627 4.5e-17 91.7 77 57.1
HPP92_028553 Vanilla planifolia HOM05D000070 ORTHO05D006627 8.5e-16 87.4 105 47.6
Lj4A664T70 Lonicera japonica HOM05D000070 ORTHO05D006627 1.2e-14 83.6 141 39.7
Pp3c8_20390 Physcomitrium patens HOM05D000070 ORTHO05D006627 2.3e-13 79.3 110 43.6
Mapoly0173s0010 Marchantia polymorpha HOM05D000070 ORTHO05D006627 4.4e-12 75.1 117 38.5
CBR_g8074 Chara braunii HOM05D000070 ORTHO05D006627 1.4e-10 70.1 114 37.7
DCAR_014363 Daucus carota HOM05D000070 ORTHO05D006627 7.0e-10 67.8 59 57.6
SMO236G0075 Selaginella moellendorffii HOM05D000070 ORTHO05D006627 3.8e-08 62.0 130 32.3
Os08g0556500 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D006627 1.5e-07 60.1 77 41.6
AL6G19130 Arabidopsis lyrata HOM05D000070 ORTHO05D006627 5.5e-07 58.2 128 32.0
arahy.Tifrunner.gnm1.ann1.Z6028V Arachis hypogaea HOM05D000070 ORTHO05D006627 5.5e-07 58.2 50 62.0


User provided reference genes

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