Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI29650 Sapria himalayana HOM05D001849 ORTHO05D004075 6.9e-218 760.4 393 100.0
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 4.6e-28 129.8 145 47.6
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 1.3e-27 128.3 187 42.2
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 6.6e-27 125.9 147 47.6
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 8.7e-27 125.6 136 50.0
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 4.8e-25 119.8 179 41.3
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 6.9e-24 115.9 128 46.1
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 2.0e-23 114.4 129 47.3
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 4.5e-23 113.2 129 46.5
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 7.6e-23 112.5 146 45.2
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 1.3e-22 111.7 176 40.3
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 2.2e-22 110.9 177 39.0
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 2.9e-22 110.5 129 45.7
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 6.4e-22 109.4 141 41.8
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 6.4e-22 109.4 129 44.2
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 8.4e-22 109.0 176 37.5
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 1.1e-21 108.6 159 41.5
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.4e-21 108.2 221 34.4
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 1.9e-21 107.8 152 41.4
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 2.4e-21 107.5 130 47.7
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 2.4e-21 107.5 145 44.8
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 3.2e-21 107.1 145 44.1
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 3.2e-21 107.1 145 44.1
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 3.2e-21 107.1 145 41.4
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 3.2e-21 107.1 145 42.1
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 4.2e-21 106.7 129 43.4
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 4.2e-21 106.7 129 43.4
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 5.4e-21 106.3 129 41.9
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 5.4e-21 106.3 176 36.9
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 5.4e-21 106.3 164 41.5
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 7.1e-21 105.9 186 35.5
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 7.1e-21 105.9 145 44.8
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 9.3e-21 105.5 126 47.6
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.2e-20 105.1 157 42.7
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 1.2e-20 105.1 129 43.4
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 1.6e-20 104.8 144 40.3
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 1.6e-20 104.8 199 37.7
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 2.1e-20 104.4 129 46.5
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 2.7e-20 104.0 146 41.8
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 2.7e-20 104.0 146 41.8
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 2.7e-20 104.0 166 37.3
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 2.7e-20 104.0 145 39.3
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 3.5e-20 103.6 129 42.6
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 4.6e-20 103.2 126 45.2
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 6.0e-20 102.8 131 41.2
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 7.9e-20 102.4 171 38.6
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 1.0e-19 102.1 131 43.5
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 1.3e-19 101.7 186 32.3
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.3e-19 101.7 184 35.3
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 2.3e-19 100.9 152 39.5
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 3.0e-19 100.5 128 43.8
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 5.1e-19 99.8 172 34.9
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 5.1e-19 99.8 145 40.7
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 5.1e-19 99.8 145 40.0
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 8.7e-19 99.0 125 42.4
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 8.7e-19 99.0 125 42.4
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 8.7e-19 99.0 132 40.9
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 8.7e-19 99.0 147 39.5
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 8.7e-19 99.0 147 38.8
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 8.7e-19 99.0 185 33.5
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 8.7e-19 99.0 130 42.3
Haze_16071 Corylus avellana HOM05D001849 ORTHO05D004075 1.5e-18 98.2 129 46.5
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 2.5e-18 97.4 129 42.6
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 2.5e-18 97.4 129 43.4
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 3.3e-18 97.1 135 39.3
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 3.3e-18 97.1 131 42.7
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 7.4e-18 95.9 145 39.3
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 9.6e-18 95.5 145 42.1
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 9.6e-18 95.5 130 41.5
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 9.6e-18 95.5 135 43.0
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.3e-17 95.1 144 39.6
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 1.6e-17 94.7 129 41.9
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 2.1e-17 94.4 176 36.4
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 3.7e-17 93.6 135 39.3
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 3.7e-17 93.6 130 40.0
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 6.2e-17 92.8 123 40.7
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 6.2e-17 92.8 186 32.8
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 8.1e-17 92.4 186 31.7
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 8.1e-17 92.4 131 39.7
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 8.1e-17 92.4 129 40.3
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 1.1e-16 92.0 128 41.4
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 1.1e-16 92.0 128 43.8
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 1.4e-16 91.7 133 41.4
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 1.4e-16 91.7 129 36.4
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.4e-16 91.7 141 37.6
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 1.8e-16 91.3 133 40.6
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 2.4e-16 90.9 157 40.1
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 3.1e-16 90.5 129 39.5
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 3.1e-16 90.5 144 38.9
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 4.0e-16 90.1 129 40.3
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 4.0e-16 90.1 129 40.3
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 4.0e-16 90.1 129 40.3
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 6.9e-16 89.4 130 38.5
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 6.9e-16 89.4 129 40.3
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 6.9e-16 89.4 129 40.3
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 6.9e-16 89.4 137 39.4
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 6.9e-16 89.4 129 38.8
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 1.2e-15 88.6 127 40.9
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 1.2e-15 88.6 130 36.9
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 2.6e-15 87.4 128 39.1
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 2.6e-15 87.4 128 39.1
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 3.4e-15 87.0 144 38.2
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 4.5e-15 86.7 159 35.8
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 7.6e-15 85.9 125 39.2
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 1.7e-14 84.7 187 32.1
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 1.7e-14 84.7 95 44.2
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 2.2e-14 84.3 128 38.3
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 2.2e-14 84.3 138 34.8
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 4.9e-14 83.2 125 38.4
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 6.4e-14 82.8 126 41.3
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 1.4e-13 81.6 146 38.4
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 5.5e-13 79.7 144 31.9
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 5.5e-13 79.7 175 32.0
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 2.7e-12 77.4 126 38.9
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 1.0e-11 75.5 128 38.3
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 2.3e-11 74.3 140 34.3
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 3.9e-11 73.6 133 35.3
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 5.1e-11 73.2 129 34.1
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 5.1e-11 73.2 186 28.5
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 1.1e-10 72.0 134 35.1
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 3.7e-09 67.0 80 46.2
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 4.8e-09 66.6 133 31.6
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 6.2e-09 66.2 82 48.8
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 8.2e-09 65.9 136 36.0
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 8.2e-09 65.9 135 34.8
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 2.6e-07 60.8 98 39.8
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 3.4e-07 60.5 131 34.4
BcaC03g15372 Brassica carinata HOM05D001849 ORTHO05D004075 5.8e-07 59.7 107 37.4
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 7.6e-07 59.3 127 33.9


User provided reference genes

Program Settings