Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26980 Sapria himalayana HOM05D001674 ORTHO05D008374 1.2e-194 682.9 343 100.0
TAR371G0783 Trochodendron aralioides HOM05D001674 ORTHO05D008374 2.9e-42 176.8 337 34.4
Manes.06G087800 Manihot esculenta HOM05D001674 ORTHO05D008374 4.9e-42 176.0 334 34.4
Dinv38776 Davidia involucrata HOM05D001674 ORTHO05D008374 7.8e-40 168.7 334 32.9
Cfa019293 Carpinus fangiana HOM05D001674 ORTHO05D008374 1.0e-39 168.3 334 32.9
Hma1.2p1_0322F.1_g124930 Hydrangea macrophylla HOM05D001674 ORTHO05D008374 1.7e-39 167.5 334 32.9
Haze_07675 Corylus avellana HOM05D001674 ORTHO05D008374 6.6e-39 165.6 334 32.9
Prupe.5G200300 Prunus persica HOM05D001674 ORTHO05D008374 4.3e-38 162.9 334 32.0
Potri.012G067000 Populus trichocarpa HOM05D001674 ORTHO05D008374 5.6e-38 162.5 334 32.3
Sabra12G0048100 Salix brachista HOM05D001674 ORTHO05D008374 5.6e-38 162.5 334 32.6
MD14G1208200 Malus domestica HOM05D001674 ORTHO05D008374 4.7e-37 159.5 333 32.4
TWI15G0866 Tripterygium wilfordii HOM05D001674 ORTHO05D008374 4.0e-36 156.4 334 30.8
GSVIVG01007916001 Vitis vinifera HOM05D001674 ORTHO05D008374 4.0e-36 156.4 339 32.4
COL.COLO4_36884 Corchorus olitorius HOM05D001674 ORTHO05D008374 1.2e-35 154.8 334 32.3
Nn4g23350 Nelumbo nucifera HOM05D001674 ORTHO05D008374 1.5e-35 154.5 335 31.3
arahy.Tifrunner.gnm1.ann1.D3EHI2 Arachis hypogaea HOM05D001674 ORTHO05D008374 5.8e-35 152.5 333 30.0
RcHm_v2.0_Chr7g0182391 Rosa chinensis HOM05D001674 ORTHO05D008374 5.8e-35 152.5 334 31.4
arahy.Tifrunner.gnm1.ann1.1X400K Arachis hypogaea HOM05D001674 ORTHO05D008374 1.3e-34 151.4 333 30.0
Cpa.g.sc94.1 Carica papaya HOM05D001674 ORTHO05D008374 2.9e-34 150.2 335 31.6
Gohir.D03G095500 Gossypium hirsutum HOM05D001674 ORTHO05D008374 4.9e-34 149.4 334 30.8
Glyma.06G199800 Glycine max HOM05D001674 ORTHO05D008374 6.4e-34 149.1 339 30.4
Atru.chr9.282 Acer truncatum HOM05D001674 ORTHO05D008374 8.3e-34 148.7 334 30.5
Ciclev10018579m.g Citrus clementina HOM05D001674 ORTHO05D008374 1.1e-33 148.3 334 31.7
Lj1g0003467 Lotus japonicus HOM05D001674 ORTHO05D008374 1.9e-33 147.5 333 30.0
Lalb_Chr22g0355251 Lupinus albus HOM05D001674 ORTHO05D008374 1.9e-33 147.5 333 30.3
Aqoxy3G00457 Aquilegia oxysepala HOM05D001674 ORTHO05D008374 2.4e-33 147.1 334 30.2
Gorai.003G100200 Gossypium raimondii HOM05D001674 ORTHO05D008374 4.1e-33 146.4 334 30.2
Thecc.03G096600 Theobroma cacao HOM05D001674 ORTHO05D008374 9.2e-33 145.2 334 30.8
FvH4_5g14341 Fragaria vesca HOM05D001674 ORTHO05D008374 2.7e-32 143.7 334 30.5
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 2.7e-32 143.7 334 30.5
Migut.D01671 Erythranthe guttata HOM05D001674 ORTHO05D008374 6.0e-32 142.5 334 30.5
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 6.0e-32 142.5 334 30.2
CsaV3_1G002690 Cucumis sativus L. HOM05D001674 ORTHO05D008374 7.8e-32 142.1 334 30.2
PGR083G1883 Punica granatum HOM05D001674 ORTHO05D008374 7.8e-32 142.1 334 29.3
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.0e-31 141.7 334 30.2
VMungo1309G0587 Vigna mungo HOM05D000002 ORTHO05D000001 1.0e-31 141.7 337 28.5
CANSAT80G0757 Cannabis sativa HOM05D001674 ORTHO05D008374 1.7e-31 141.0 334 29.6
MELO3C017204.2 Cucumis melo HOM05D001674 ORTHO05D008374 3.0e-31 140.2 334 30.2
TPR.G12256 Trifolium pratense HOM05D001674 ORTHO05D008374 3.9e-31 139.8 333 28.5
Eucgr.B00565 Eucalyptus grandis HOM05D001674 ORTHO05D008374 6.6e-31 139.0 333 29.1
Psat5g198440 Pisum sativum HOM05D001674 ORTHO05D008374 8.6e-31 138.7 333 28.5
ClCG06G015870 Citrullus lanatus HOM05D001674 ORTHO05D008374 1.1e-30 138.3 334 30.5
Oeu032214.1 Olea europaea HOM05D001674 ORTHO05D008374 1.9e-30 137.5 337 30.0
Phvul.009G190731 Phaseolus vulgaris HOM05D001674 ORTHO05D008374 1.9e-30 137.5 340 28.8
Sed0002195 Sechium edule HOM05D001674 ORTHO05D008374 4.3e-30 136.3 334 30.2
THA.LOC104818327 Tarenaya hassleriana HOM05D001674 ORTHO05D008374 1.1e-28 131.7 334 28.4
Lj9A469T59 Lonicera japonica HOM05D001674 ORTHO05D008374 1.4e-28 131.3 334 29.6
CAN.G479.34 Capsicum annuum HOM05D001674 ORTHO05D008374 3.1e-28 130.2 338 29.9
Rhsim08G0149800 Rhododendron simsii HOM05D000001 ORTHO05D008374 3.1e-28 130.2 334 29.3
Nitab4.5_0002881g0060 Nicotiana tabacum HOM05D001674 ORTHO05D008374 4.0e-28 129.8 336 29.2
Sopen03g034520 Solanum pennellii HOM05D001674 ORTHO05D008374 6.8e-28 129.0 334 28.7
MSTRG.9601 Avicennia marina HOM05D001674 ORTHO05D008374 8.9e-28 128.6 333 27.9
PSO017G4168 Papaver somniferum HOM05D001674 ORTHO05D008374 8.9e-28 128.6 334 28.4
Peaxi162Scf00201g00024 Petunia axillaris HOM05D001674 ORTHO05D008374 8.9e-28 128.6 333 29.1
AL6G18150 Arabidopsis lyrata HOM05D001674 ORTHO05D008374 1.5e-27 127.9 334 26.9
DCAR_026018 Daucus carota HOM05D001674 ORTHO05D008374 2.6e-27 127.1 334 28.1
SGA_v2.0_scaffold65G22108 Striga asiatica HOM05D001674 ORTHO05D008374 4.4e-27 126.3 334 27.2
Thhalv10012481m.g Eutrema salsugineum HOM05D001674 ORTHO05D008374 2.9e-26 123.6 334 27.2
SalBow7G3861 Salvia bowleyana HOM05D001674 ORTHO05D008374 3.8e-26 123.2 333 26.7
A03p03470 Brassica napus HOM05D001674 ORTHO05D008374 4.9e-26 122.9 335 27.5
BraA03t09697Z Brassica rapa HOM05D001674 ORTHO05D008374 1.9e-25 120.9 335 27.5
BolC3t12927H Brassica oleracea HOM05D001674 ORTHO05D008374 3.2e-25 120.2 335 27.5
Nitab4.5_0004511g0090 Nicotiana tabacum HOM05D001674 ORTHO05D008374 3.2e-25 120.2 336 28.0
C03p03890 Brassica napus HOM05D001674 ORTHO05D008374 4.2e-25 119.8 335 27.5
Sp6g35120 Schrenkiella parvula HOM05D001674 ORTHO05D008374 4.2e-25 119.8 334 26.6
Carub.0006s0673 Capsella rubella HOM05D001674 ORTHO05D008374 5.4e-25 119.4 334 26.0
unitig_0.g12 Utricularia gibba HOM05D001674 ORTHO05D008374 7.1e-25 119.0 334 27.2
HanXRQChr14g0426861 Helianthus annuus HOM05D001674 ORTHO05D008374 9.3e-25 118.6 333 28.5
Aa31LG3G18650 Aethionema arabicum HOM05D001674 ORTHO05D008374 1.6e-24 117.9 334 26.9
AT5G07810 Arabidopsis thaliana HOM05D001674 ORTHO05D008374 2.7e-24 117.1 333 26.4
Gohir.A03G069032 Gossypium hirsutum HOM05D001674 ORTHO05D008374 2.7e-24 117.1 103 55.3
Cc00_g02240 Coffea canephora HOM05D001674 ORTHO05D008374 2.3e-23 114.0 104 54.8
Os07g0598300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008374 6.6e-23 112.5 333 27.0
Lsat_1_v5_gn_5_21720 Lactuca sativa HOM05D001674 ORTHO05D008374 8.7e-23 112.1 333 27.0
Cc00_g14900 Coffea canephora HOM05D001674 ORTHO05D008374 1.9e-22 110.9 98 57.1
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 2.5e-22 110.5 138 43.5
ATR0064G032 Amborella trichopoda HOM05D001674 ORTHO05D008374 4.3e-22 109.8 335 27.5
CSS0007026 Camellia sinensis var. sinensis HOM05D001674 ORTHO05D008374 4.3e-22 109.8 317 27.8
Zm00001eb326710 Zea mays HOM05D001674 ORTHO05D008374 9.0e-20 102.1 333 25.8
Sc12g0006560 Simmondsia chinensis HOM05D001674 ORTHO05D008374 5.8e-19 99.4 335 25.1
vmacro17585 Vaccinium macrocarpon HOM05D001674 ORTHO05D008374 1.4e-17 94.7 63 65.1
AUR62008488 Chenopodium quinoa HOM05D001674 ORTHO05D008374 3.5e-16 90.1 104 46.2
AUR62021607 Chenopodium quinoa HOM05D001674 ORTHO05D008374 3.9e-15 86.7 96 47.9
Hund09848 Selenicereus undatus HOM05D001674 ORTHO05D008374 4.3e-14 83.2 103 41.7
EL10Ac5g11090 Beta vulgaris HOM05D001674 ORTHO05D008374 9.6e-14 82.0 103 44.7
SEGI_38041 Sequoiadendron giganteum HOM05D001674 ORTHO05D008374 2.1e-13 80.9 129 37.2
Ah.11g048050 Amaranthus hybridus HOM05D001674 ORTHO05D008374 1.1e-12 78.6 63 60.3
Ca_13626_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008374 3.1e-12 77.0 82 46.3
AagrBONN_evm.TU.Sc2ySwM_117.3709 Anthoceros agrestis HOM05D001674 ORTHO05D008374 5.8e-11 72.8 65 50.8
Pp3c1_13300 Physcomitrium patens HOM05D001674 ORTHO05D008374 1.1e-09 68.6 63 42.9
Pp3c1_13308 Physcomitrium patens HOM05D001674 ORTHO05D008374 1.1e-09 68.6 63 42.9
SMO358G0589 Selaginella moellendorffii HOM05D001674 ORTHO05D008374 1.3e-07 61.6 100 38.0


User provided reference genes

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