Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21256 Sapria himalayana HOM05D003044 ORTHO05D001869 1.7e-52 209.1 111 100.0
TAR636G1345 Trochodendron aralioides HOM05D003044 ORTHO05D001869 8.2e-15 84.0 117 54.7
Lj6g0024518 Lotus japonicus HOM05D003044 ORTHO05D001869 2.4e-14 82.4 114 57.0
Phvul.007G233800 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 3.1e-14 82.0 114 54.4
CANSAT56G3871 Cannabis sativa HOM05D003044 ORTHO05D001869 5.3e-14 81.3 118 58.5
Cpa.g.sc33.124 Carica papaya HOM05D003044 ORTHO05D001869 5.3e-14 81.3 115 55.7
Ca_18140_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 1.5e-13 79.7 117 53.8
Cc02_g09260 Coffea canephora HOM05D003044 ORTHO05D001869 2.0e-13 79.3 123 50.4
VMungo0720G1731 Vigna mungo HOM05D003044 ORTHO05D001869 3.4e-13 78.6 121 53.7
MELO3C019915.2 Cucumis melo HOM05D003044 ORTHO05D001869 1.3e-12 76.6 116 56.9
CsaV3_6G004440 Cucumis sativus L. HOM05D003044 ORTHO05D001869 1.3e-12 76.6 116 56.0
Manes.07G084000 Manihot esculenta HOM05D003044 ORTHO05D001869 1.3e-12 76.6 127 47.2
CARHR085230 Cardamine hirsuta HOM05D003044 ORTHO05D001869 1.7e-12 76.3 113 51.3
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 1.7e-12 76.3 116 50.9
QL04p049165 Quercus lobata HOM05D003044 ORTHO05D001869 1.7e-12 76.3 116 50.9
Sabra10G0191200 Salix brachista HOM05D003044 ORTHO05D001869 1.7e-12 76.3 113 49.6
Aqoxy2G00627 Aquilegia oxysepala HOM05D003044 ORTHO05D001869 2.9e-12 75.5 118 50.0
BraA01t04231Z Brassica rapa HOM05D003044 ORTHO05D001869 2.9e-12 75.5 118 50.0
Lj5g0009221 Lotus japonicus HOM05D003044 ORTHO05D001869 2.9e-12 75.5 121 51.2
MSTRG.27548 Avicennia marina HOM05D003044 ORTHO05D001869 8.5e-12 73.9 118 53.4
Lalb_Chr19g0128991 Lupinus albus HOM05D003044 ORTHO05D001869 8.5e-12 73.9 116 51.7
ClCG08G008450 Citrullus lanatus HOM05D003044 ORTHO05D001869 1.1e-11 73.6 119 55.5
Oeu015285.1 Olea europaea HOM05D003044 ORTHO05D001869 1.1e-11 73.6 118 50.0
Potri.008G015350 Populus trichocarpa HOM05D003044 ORTHO05D001869 1.1e-11 73.6 114 51.8
BolC1t05369H Brassica oleracea HOM05D003044 ORTHO05D001869 1.4e-11 73.2 118 49.2
CDE07G1072 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 2.5e-11 72.4 115 46.1
CiPaw.14G036200 Carya illinoinensis HOM05D003044 ORTHO05D001869 3.2e-11 72.0 116 49.1
Lj2A36T50 Lonicera japonica HOM05D003044 ORTHO05D001869 3.2e-11 72.0 118 53.4
GSVIVG01034601001 Vitis vinifera HOM05D003044 ORTHO05D001869 3.2e-11 72.0 116 50.0
Lalb_Chr01g0010681 Lupinus albus HOM05D003044 ORTHO05D001869 4.2e-11 71.6 117 51.3
TWI63G0823 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 4.2e-11 71.6 117 49.6
Haze_03430 Corylus avellana HOM05D003044 ORTHO05D001869 5.5e-11 71.2 113 49.6
CDE04G3330 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 7.2e-11 70.9 116 48.3
Sed0023754 Sechium edule HOM05D003044 ORTHO05D001869 7.2e-11 70.9 114 52.6
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 7.2e-11 70.9 115 50.4
AT3G10650 Arabidopsis thaliana HOM05D003044 ORTHO05D001869 1.2e-10 70.1 117 47.9
PSO384G0573 Papaver somniferum HOM05D003044 ORTHO05D001869 1.2e-10 70.1 117 48.7
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 2.1e-10 69.3 117 50.4
THA.LOC104816476 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 2.1e-10 69.3 113 51.3
Glyma.20G195200 Glycine max HOM05D003044 ORTHO05D001869 2.7e-10 68.9 115 50.4
Ca_10422_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 3.6e-10 68.6 115 52.2
Migut.F01554 Erythranthe guttata HOM05D003044 ORTHO05D001869 3.6e-10 68.6 126 48.4
Psat6g171360 Pisum sativum HOM05D003044 ORTHO05D001869 3.6e-10 68.6 116 50.9
THA.LOC104823155 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 3.6e-10 68.6 119 47.9
Atru.chr12.1090 Acer truncatum HOM05D003044 ORTHO05D001869 4.6e-10 68.2 120 50.8
Aa31LG3G3500 Aethionema arabicum HOM05D003044 ORTHO05D001869 4.6e-10 68.2 115 48.7
Rhsim09G0140200 Rhododendron simsii HOM05D003044 ORTHO05D001869 6.1e-10 67.8 117 49.6
CSS0000792 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 1.0e-09 67.0 117 51.3
Glyma.10G194700 Glycine max HOM05D003044 ORTHO05D001869 1.0e-09 67.0 111 45.9
Manes.10G059500 Manihot esculenta HOM05D003044 ORTHO05D001869 1.0e-09 67.0 132 46.2
PGR044G1498 Punica granatum HOM05D003044 ORTHO05D001869 1.0e-09 67.0 118 46.6
Lalb_Chr02g0150891 Lupinus albus HOM05D003044 ORTHO05D001869 1.4e-09 66.6 117 49.6
Cfa010501 Carpinus fangiana HOM05D003044 ORTHO05D001869 2.3e-09 65.9 113 51.3
PSO339G5639 Papaver somniferum HOM05D003044 ORTHO05D001869 3.9e-09 65.1 119 47.9
Phvul.007G136500 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 3.9e-09 65.1 115 52.2
Sopen05g033570 Solanum pennellii HOM05D003044 ORTHO05D001869 3.9e-09 65.1 118 45.8
AL3G22120 Arabidopsis lyrata HOM05D003044 ORTHO05D001869 5.1e-09 64.7 117 46.2
Ciclev10014057m.g Citrus clementina HOM05D003044 ORTHO05D001869 5.1e-09 64.7 122 48.4
Lsat_1_v5_gn_8_21821 Lactuca sativa HOM05D003044 ORTHO05D001869 5.1e-09 64.7 119 47.9
Dinv04420 Davidia involucrata HOM05D003044 ORTHO05D001869 6.7e-09 64.3 116 49.1
Psat4g227200 Pisum sativum HOM05D003044 ORTHO05D001869 6.7e-09 64.3 112 49.1
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 8.8e-09 63.9 116 47.4
Gohir.A05G396100 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.1e-08 63.5 112 47.3
Gohir.D04G018900 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.1e-08 63.5 112 47.3
Hma1.2p1_0098F.1_g048320 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 1.1e-08 63.5 113 46.0
MBI05_g36784_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 1.1e-08 63.5 115 47.0
Sed0010208 Sechium edule HOM05D003044 ORTHO05D001869 1.1e-08 63.5 118 45.8
Hund22391 Selenicereus undatus HOM05D003044 ORTHO05D001869 1.1e-08 63.5 123 47.2
CSS0031943 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 1.5e-08 63.2 117 53.0
Nitab4.5_0000687g0150 Nicotiana tabacum HOM05D003044 ORTHO05D001869 1.5e-08 63.2 115 45.2
VMungo0720G0604 Vigna mungo HOM05D003044 ORTHO05D001869 1.5e-08 63.2 115 48.7
Migut.F00829 Erythranthe guttata HOM05D003044 ORTHO05D001869 1.9e-08 62.8 114 47.4
Sopen11g002290 Solanum pennellii HOM05D003044 ORTHO05D001869 1.9e-08 62.8 132 43.2
PGSC0003DMG400023499 Solanum tuberosum HOM05D003044 ORTHO05D001869 1.9e-08 62.8 119 44.5
Actinidia31115 Actinidia chinensis HOM05D003044 ORTHO05D001869 2.5e-08 62.4 117 47.9
AUR62033063 Chenopodium quinoa HOM05D003044 ORTHO05D001869 2.5e-08 62.4 116 50.0
Oeu020482.1 Olea europaea HOM05D003044 ORTHO05D001869 2.5e-08 62.4 115 46.1
EL10Ac8g19444 Beta vulgaris HOM05D003044 ORTHO05D001869 3.3e-08 62.0 114 48.2
Sabra08G0009300 Salix brachista HOM05D003044 ORTHO05D001869 3.3e-08 62.0 114 46.5
Solyc05g055130.1 Solanum lycopersicum HOM05D003044 ORTHO05D001869 3.3e-08 62.0 116 44.8
vmacro10333 Vaccinium macrocarpon HOM05D003044 ORTHO05D001869 3.3e-08 62.0 119 48.7
Gorai.012G022400 Gossypium raimondii HOM05D003044 ORTHO05D001869 5.7e-08 61.2 112 46.4
Lalb_Chr21g0312741 Lupinus albus HOM05D003044 ORTHO05D001869 5.7e-08 61.2 140 44.3
CAN.G1433.1 Capsicum annuum HOM05D003044 ORTHO05D001869 7.4e-08 60.8 116 46.6
Nitab4.5_0005247g0010 Nicotiana tabacum HOM05D003044 ORTHO05D001869 7.4e-08 60.8 116 44.8
AUR62042206 Chenopodium quinoa HOM05D003044 ORTHO05D001869 9.7e-08 60.5 108 51.9
Gohir.D04G019000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 9.7e-08 60.5 114 50.9
Gorai.012G022500 Gossypium raimondii HOM05D003044 ORTHO05D001869 9.7e-08 60.5 114 50.9
Gorai.012G022800 Gossypium raimondii HOM05D003044 ORTHO05D001869 9.7e-08 60.5 114 50.0
Oeu025606.1 Olea europaea HOM05D003044 ORTHO05D001869 1.7e-07 59.7 117 46.2
Actinidia34738 Actinidia chinensis HOM05D003044 ORTHO05D001869 2.2e-07 59.3 133 42.9
Gohir.A05G396000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 2.2e-07 59.3 114 49.1
Gohir.D04G019060 Gossypium hirsutum HOM05D003044 ORTHO05D001869 2.2e-07 59.3 116 40.5
Gorai.012G022700 Gossypium raimondii HOM05D003044 ORTHO05D001869 2.2e-07 59.3 116 40.5
CAN.G765.14 Capsicum annuum HOM05D003044 ORTHO05D001869 2.8e-07 58.9 115 44.3
Glyma.10G120200 Glycine max HOM05D003044 ORTHO05D001869 2.8e-07 58.9 121 44.6
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 2.8e-07 58.9 117 43.6
PGR044G1324 Punica granatum HOM05D003044 ORTHO05D001869 2.8e-07 58.9 118 44.9
Psat6g049400 Pisum sativum HOM05D003044 ORTHO05D001869 4.8e-07 58.2 154 40.3
A03p36670 Brassica napus HOM05D003044 ORTHO05D001869 6.3e-07 57.8 119 42.9
BraA03t12831Z Brassica rapa HOM05D003044 ORTHO05D001869 6.3e-07 57.8 119 42.9
HPP92_019542 Vanilla planifolia HOM05D003044 ORTHO05D001869 1.1e-06 57.0 122 41.8
Potri.010G244700 Populus trichocarpa HOM05D003044 ORTHO05D001869 1.4e-06 56.6 114 44.7
Sp3g08960 Schrenkiella parvula HOM05D003044 ORTHO05D001869 1.4e-06 56.6 118 44.9
C03p44310 Brassica napus HOM05D003044 ORTHO05D001869 1.8e-06 56.2 119 42.0
BolC3t16701H Brassica oleracea HOM05D003044 ORTHO05D001869 1.8e-06 56.2 119 42.0
HanXRQChr11g0322921 Helianthus annuus HOM05D003044 ORTHO05D001869 1.8e-06 56.2 110 41.8
Hma1.2p1_0153F.1_g067850 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 1.8e-06 56.2 115 47.8
Peaxi162Scf00120g00721 Petunia axillaris HOM05D003044 ORTHO05D001869 2.4e-06 55.8 116 47.4
Solyc11g006390.2 Solanum lycopersicum HOM05D003044 ORTHO05D001869 2.4e-06 55.8 137 39.4
Duzib128G0650 Durio zibethinus HOM05D003044 ORTHO05D001869 3.1e-06 55.5 115 44.3
Os03g0788300 Oryza sativa ssp. japonica HOM05D003044 ORTHO05D001869 3.1e-06 55.5 113 43.4
TWI15G1087 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 3.1e-06 55.5 117 43.6
Gohir.D04G019020 Gossypium hirsutum HOM05D003044 ORTHO05D001869 4.1e-06 55.1 110 49.1
Lsat_1_v5_gn_2_106321 Lactuca sativa HOM05D003044 ORTHO05D001869 5.3e-06 54.7 126 44.4
Ah.14g085720 Amaranthus hybridus HOM05D003044 ORTHO05D001869 6.9e-06 54.3 120 43.3
Lj3A920T29 Lonicera japonica HOM05D003044 ORTHO05D001869 6.9e-06 54.3 115 42.6
CAN.G143.56 Capsicum annuum HOM05D003044 ORTHO05D001869 9.1e-06 53.9 116 41.4
Medtr1g040610 Medicago truncatula HOM05D003044 ORTHO05D001869 9.1e-06 53.9 112 45.5
Peaxi162Scf00519g00028 Petunia axillaris HOM05D003044 ORTHO05D001869 9.1e-06 53.9 116 42.2


User provided reference genes

Program Settings