Gene: Sopen11g002290
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g002290
- Transcript Identifier Sopen11g002290.1
- Gene Type Coding gene
- Location Spenn-ch11 : 1137634-1147255 : positive
Gene Family Information
- ID HOM05D003044
- #Genes/#Species 226/91
- Phylogenetic origin
- ID ORTHO05D001869
- #Genes/#Species 344/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g002290.1
Descriptions
- Description BEST Arabidopsis thaliana protein match is: nucleoporin-related
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006997 | ISO | PLAZA Integrative Orthology | nucleus organization | AT3G10650 |
| GO:0016973 | ISO | PLAZA Integrative Orthology | poly(A)+ mRNA export from nucleus | AT3G10650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G10650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT3G10650 |
| GO:0034399 | ISO | PLAZA Integrative Orthology | nuclear periphery | AT3G10650 |
| GO:0005643 | ISO | PLAZA Integrative Orthology | nuclear pore | AT3G10650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 23.5.1.1.5.3 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUP1/NUP136) |