Gene: AT3G10650
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G10650
- Transcript Identifier AT3G10650.2
- Gene Type Coding gene
- Location Chr3 : 3325562-3330819 : negative
Gene Family Information
- ID HOM05D003044
- #Genes/#Species 226/91
- Phylogenetic origin
- ID ORTHO05D001869
- #Genes/#Species 344/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G10650.2
- symbol NUP1
- uniprot Q9CAF4
Descriptions
- Description nuclear pore complex protein
- Computational description BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016973 | IMP IBA | Gene Ontology | poly(A)+ mRNA export from nucleus | 1 2 |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0051028 | IEA | GOA Database | mRNA transport | |
| GO:0071763 | IBA | Gene Ontology | nuclear membrane organization | 2 |
| GO:0006997 | IMP | Gene Ontology | nucleus organization | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005829 | IEA | GOA Database | cytosol | |
| GO:0005635 | IEA | GOA Database | nuclear envelope | |
| GO:0005635 | IDA IBA | Gene Ontology | nuclear envelope | 1 2 |
| GO:0005643 | IEA | GOA Database | nuclear pore | |
| GO:0005643 | IDA | Gene Ontology | nuclear pore | 4 |
| GO:0034399 | IDA | Gene Ontology | nuclear periphery | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 23.5.1.1.5.3 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUP1/NUP136) |