Gene: Solyc11g006390.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g006390.2
- Transcript Identifier Solyc11g006390.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 1130180-1139772 : positive
Gene Family Information
- ID HOM05D003044
- #Genes/#Species 226/91
- Phylogenetic origin
- ID ORTHO05D001869
- #Genes/#Species 344/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc11g006390.2.1
- uniprot A0A3Q7IPC9
- gene_id Solyc11g006390
Descriptions
- Description nuclear pore complex protein NUP1-like (AHRD V3.3 *-* A0A2I4DIV8_9ROSI)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071763 | IBA | GOA Database | nuclear membrane organization | |
| GO:0016973 | IBA | GOA Database | poly(A)+ mRNA export from nucleus | |
| GO:0006997 | ISO | PLAZA Integrative Orthology | nucleus organization | AT3G10650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G10650 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005635 | IBA | GOA Database | nuclear envelope | |
| GO:0034399 | ISO | PLAZA Integrative Orthology | nuclear periphery | AT3G10650 |
| GO:0005643 | ISO | PLAZA Integrative Orthology | nuclear pore | AT3G10650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 23.5.1.1.5.3 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUP1/NUP136) |