Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21131 Sapria himalayana HOM05D002037 ORTHO05D005261 6.9e-276 953.4 484 100.0
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 3.7e-136 489.2 420 63.6
Potri.006G280200 Populus trichocarpa HOM05D002037 ORTHO05D005261 9.1e-135 484.6 422 63.0
COL.COLO4_18641 Corchorus olitorius HOM05D002037 ORTHO05D005261 5.9e-134 481.9 428 61.9
TWI32G0793 Tripterygium wilfordii HOM05D002037 ORTHO05D005261 5.5e-132 475.3 423 62.4
Ciclev10007230m.g Citrus clementina HOM05D002037 ORTHO05D005261 9.4e-132 474.6 420 61.7
Cfa013233 Carpinus fangiana HOM05D002037 ORTHO05D005261 6.7e-130 468.4 428 60.0
Cpa.g.sc148.12 Carica papaya HOM05D002037 ORTHO05D005261 1.5e-129 467.2 426 61.3
MD08G1132100 Malus domestica HOM05D002037 ORTHO05D005261 5.7e-129 465.3 422 60.9
Atru.chr7.2709 Acer truncatum HOM05D002037 ORTHO05D005261 1.7e-128 463.8 420 61.2
Haze_21662 Corylus avellana HOM05D002037 ORTHO05D005261 4.8e-128 462.2 428 59.8
Prupe.1G463700 Prunus persica HOM05D002037 ORTHO05D005261 3.1e-127 459.5 422 60.4
TWI63G1280 Tripterygium wilfordii HOM05D002037 ORTHO05D005261 4.1e-127 459.1 423 60.3
QL12p030895 Quercus lobata HOM05D002037 ORTHO05D005261 5.3e-127 458.8 419 60.1
Thecc.09G001100 Theobroma cacao HOM05D002037 ORTHO05D005261 7.0e-127 458.4 422 59.7
CiPaw.07G216200 Carya illinoinensis HOM05D002037 ORTHO05D005261 4.5e-126 455.7 420 60.2
Manes.16G138600 Manihot esculenta HOM05D002037 ORTHO05D005261 3.8e-125 452.6 424 59.7
Gohir.D08G274900 Gossypium hirsutum HOM05D002037 ORTHO05D005261 8.5e-125 451.4 443 57.3
Gorai.004G293400 Gossypium raimondii HOM05D002037 ORTHO05D005261 8.5e-125 451.4 443 57.3
GSVIVG01035587001 Vitis vinifera HOM05D002037 ORTHO05D005261 8.5e-125 451.4 422 59.7
Gohir.A08G253200 Gossypium hirsutum HOM05D002037 ORTHO05D005261 2.5e-124 449.9 443 57.3
Sed0009824 Sechium edule HOM05D002037 ORTHO05D005261 2.5e-124 449.9 420 59.3
Hund19377 Selenicereus undatus HOM05D002037 ORTHO05D005261 4.2e-124 449.1 428 57.0
AUR62020667 Chenopodium quinoa HOM05D002037 ORTHO05D005261 2.1e-123 446.8 428 58.2
AUR62028065 Chenopodium quinoa HOM05D002037 ORTHO05D005261 6.1e-123 445.3 428 57.7
Sed0015816 Sechium edule HOM05D002037 ORTHO05D005261 6.1e-123 445.3 433 58.2
CSS0033264 Camellia sinensis var. sinensis HOM05D002037 ORTHO05D005261 8.0e-123 444.9 422 59.2
ClCG05G017350 Citrullus lanatus HOM05D002037 ORTHO05D005261 8.0e-123 444.9 444 57.4
Rhsim07G0173400 Rhododendron simsii HOM05D002037 ORTHO05D005261 1.0e-122 444.5 421 59.6
Lj7A751T36 Lonicera japonica HOM05D002037 ORTHO05D005261 1.4e-122 444.1 422 58.5
Psat5g026040 Pisum sativum HOM05D002037 ORTHO05D005261 1.8e-122 443.7 423 58.9
vmacro05091 Vaccinium macrocarpon HOM05D002037 ORTHO05D005261 1.8e-122 443.7 423 59.3
CiPaw.08G017100 Carya illinoinensis HOM05D002037 ORTHO05D005261 3.9e-122 442.6 420 58.6
MELO3C003650.2 Cucumis melo HOM05D002037 ORTHO05D005261 3.9e-122 442.6 421 59.1
PGR044G2421 Punica granatum HOM05D002037 ORTHO05D005261 5.2e-122 442.2 422 58.3
Actinidia03327 Actinidia chinensis HOM05D002037 ORTHO05D005261 1.1e-121 441.0 424 58.3
Aqoxy6G00128 Aquilegia oxysepala HOM05D002037 ORTHO05D005261 5.7e-121 438.7 419 58.9
Glyma.06G075000 Glycine max HOM05D002037 ORTHO05D005261 5.7e-121 438.7 403 60.0
Dinv09451 Davidia involucrata HOM05D002037 ORTHO05D005261 9.7e-121 438.0 422 58.1
EL10Ac2g03672 Beta vulgaris HOM05D002037 ORTHO05D005261 2.8e-120 436.4 419 58.0
CsaV3_3G046860 Cucumis sativus L. HOM05D002037 ORTHO05D005261 2.8e-120 436.4 421 58.2
arahy.Tifrunner.gnm1.ann1.8Q3S3N Arachis hypogaea HOM05D002037 ORTHO05D005261 8.2e-120 434.9 398 59.8
arahy.Tifrunner.gnm1.ann1.WQ4U6A Arachis hypogaea HOM05D002037 ORTHO05D005261 8.2e-120 434.9 398 59.8
RcHm_v2.0_Chr6g0312521 Rosa chinensis HOM05D002037 ORTHO05D005261 1.8e-119 433.7 403 59.8
Duzib168G1462 Durio zibethinus HOM05D002037 ORTHO05D005261 2.4e-119 433.3 366 62.6
FAN27G2203 Fragaria x ananassa HOM05D002037 ORTHO05D005261 4.1e-119 432.6 403 59.8
Nn1g08375 Nelumbo nucifera HOM05D002037 ORTHO05D005261 4.1e-119 432.6 422 58.1
Lalb_Chr11g0064041 Lupinus albus HOM05D002037 ORTHO05D005261 1.6e-118 430.6 372 61.8
Lj5g0025434 Lotus japonicus HOM05D002037 ORTHO05D005261 4.5e-118 429.1 420 57.6
Peaxi162Scf00213g01313 Petunia axillaris HOM05D002037 ORTHO05D005261 4.5e-118 429.1 422 58.5
FvH4_2g30560 Fragaria vesca HOM05D002037 ORTHO05D005261 1.7e-117 427.2 403 59.3
PGR044G2064 Punica granatum HOM05D002037 ORTHO05D005261 1.7e-117 427.2 352 63.9
FAN24G1054 Fragaria x ananassa HOM05D002037 ORTHO05D005261 2.2e-117 426.8 403 59.3
HanXRQChr03g0082961 Helianthus annuus HOM05D002037 ORTHO05D005261 2.2e-117 426.8 422 57.1
Glyma.04G073900 Glycine max HOM05D002037 ORTHO05D005261 2.9e-117 426.4 366 62.0
DCAR_002179 Daucus carota HOM05D002037 ORTHO05D005261 6.5e-117 425.2 421 56.8
Lalb_Chr08g0243691 Lupinus albus HOM05D002037 ORTHO05D005261 6.5e-117 425.2 366 61.5
MD15G1113300 Malus domestica HOM05D002037 ORTHO05D005261 1.1e-116 424.5 427 56.4
Phvul.009G099700 Phaseolus vulgaris HOM05D002037 ORTHO05D005261 1.5e-116 424.1 399 58.6
Sc09g0007440 Simmondsia chinensis HOM05D002037 ORTHO05D005261 3.2e-116 422.9 428 55.6
FAN20G1121 Fragaria x ananassa HOM05D002037 ORTHO05D005261 5.5e-116 422.2 405 58.3
Eucgr.C03980 Eucalyptus grandis HOM05D002037 ORTHO05D005261 1.2e-115 421.0 342 65.5
TAR628G0359 Trochodendron aralioides HOM05D002037 ORTHO05D005261 1.2e-115 421.0 428 55.4
CANSAT25G0165 Cannabis sativa HOM05D002037 ORTHO05D005261 2.1e-115 420.2 348 63.5
Duzib187G1591 Durio zibethinus HOM05D002037 ORTHO05D005261 1.0e-114 417.9 445 53.9
VMungo1309G2917 Vigna mungo HOM05D002037 ORTHO05D005261 1.4e-114 417.5 405 58.0
Lsat_1_v5_gn_5_59360 Lactuca sativa HOM05D002037 ORTHO05D005261 2.3e-114 416.8 422 55.9
Medtr3g108470 Medicago truncatula HOM05D002037 ORTHO05D005261 3.3e-113 412.9 350 63.1
Dinv37481 Davidia involucrata HOM05D002037 ORTHO05D005261 5.7e-113 412.1 348 63.5
PSO017G1653 Papaver somniferum HOM05D002037 ORTHO05D005261 5.7e-113 412.1 418 55.3
PSO063G0181 Papaver somniferum HOM05D002037 ORTHO05D005261 5.7e-113 412.1 418 55.0
TPR.G12447 Trifolium pratense HOM05D002037 ORTHO05D005261 9.7e-113 411.4 367 60.5
THA.LOC104803889 Tarenaya hassleriana HOM05D002037 ORTHO05D005261 1.7e-112 410.6 422 55.7
Ca_15684_v3 Cicer arietinum L. HOM05D002037 ORTHO05D005261 1.4e-111 407.5 350 62.9
DCAR_030972 Daucus carota HOM05D002037 ORTHO05D005261 1.8e-111 407.1 421 54.4
Hma1.2p1_0214F.1_g090640 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 2.4e-111 406.8 366 60.7
Migut.A00462 Erythranthe guttata HOM05D002037 ORTHO05D005261 5.3e-111 405.6 423 56.3
ATR0584G173 Amborella trichopoda HOM05D002037 ORTHO05D005261 7.0e-111 405.2 417 54.9
MSTRG.25765 Avicennia marina HOM05D002037 ORTHO05D005261 9.1e-111 404.8 423 55.8
SGA_v2.0_scaffold27G11691 Striga asiatica HOM05D002037 ORTHO05D005261 1.2e-110 404.4 423 55.3
Thhalv10024189m.g Eutrema salsugineum HOM05D002037 ORTHO05D005261 2.7e-110 403.3 422 53.6
SalBow4G1905 Salvia bowleyana HOM05D002037 ORTHO05D005261 2.7e-110 403.3 423 55.8
Sopen08g023030 Solanum pennellii HOM05D002037 ORTHO05D005261 1.7e-109 400.6 355 61.4
ECA240G1370 Erigeron canadensis HOM05D002037 ORTHO05D005261 5.0e-109 399.1 357 60.2
CAN.G195.8 Capsicum annuum HOM05D002037 ORTHO05D005261 6.5e-109 398.7 355 60.6
CDE02G1944 Ceratophyllum demersum HOM05D002037 ORTHO05D005261 1.1e-108 397.9 428 51.6
Solyc08g074370.4 Solanum lycopersicum HOM05D002037 ORTHO05D005261 1.1e-108 397.9 355 60.8
Cc00_g09840 Coffea canephora HOM05D002037 ORTHO05D005261 1.9e-108 397.1 428 53.7
CDE08G1677 Ceratophyllum demersum HOM05D002037 ORTHO05D005261 3.6e-107 392.9 428 51.4
A03p60560 Brassica napus HOM05D002037 ORTHO05D005261 4.7e-107 392.5 439 51.5
BraA03t15097Z Brassica rapa HOM05D002037 ORTHO05D005261 4.7e-107 392.5 439 51.5
THA.LOC104803581 Tarenaya hassleriana HOM05D002037 ORTHO05D005261 3.0e-106 389.8 422 52.6
BcaB03g12684 Brassica carinata HOM05D002037 ORTHO05D005261 5.2e-106 389.0 422 52.6
Carub.0007s0937 Capsella rubella HOM05D002037 ORTHO05D005261 8.8e-106 388.3 355 57.5
C07p58470 Brassica napus HOM05D002037 ORTHO05D005261 1.5e-105 387.5 438 50.9
AL7G20910 Arabidopsis lyrata HOM05D002037 ORTHO05D005261 2.0e-105 387.1 349 58.2
Sp7g29040 Schrenkiella parvula HOM05D002037 ORTHO05D005261 3.4e-105 386.3 356 57.3
BcaNung01540 Brassica carinata HOM05D002037 ORTHO05D005261 1.3e-104 384.4 356 57.3
BolC7t46302H Brassica oleracea HOM05D002037 ORTHO05D005261 1.7e-104 384.0 438 50.7
CARHR239070 Cardamine hirsuta HOM05D002037 ORTHO05D005261 1.7e-104 384.0 338 59.2
BolC3t21123H Brassica oleracea HOM05D002037 ORTHO05D005261 2.2e-104 383.6 424 52.1
BcaC01g01107 Brassica carinata HOM05D002037 ORTHO05D005261 2.8e-104 383.3 343 58.3
C03p88150 Brassica napus HOM05D002037 ORTHO05D005261 3.7e-104 382.9 421 52.3
SEGI_24212 Sequoiadendron giganteum HOM05D002037 ORTHO05D005261 1.8e-103 380.6 419 51.3
A08p18770 Brassica napus HOM05D002037 ORTHO05D005261 5.4e-103 379.0 423 51.1
BraA08t33838Z Brassica rapa HOM05D002037 ORTHO05D005261 5.4e-103 379.0 423 51.1
Aa31LG2G19150 Aethionema arabicum HOM05D002037 ORTHO05D005261 2.7e-102 376.7 355 56.6
Lj1g0006019 Lotus japonicus HOM05D002037 ORTHO05D005261 4.5e-102 375.9 350 57.1
SGA_v2.0_scaffold193G40648 Striga asiatica HOM05D002037 ORTHO05D005261 4.2e-100 369.4 350 57.7
AT4G31160 Arabidopsis thaliana HOM05D002037 ORTHO05D005261 1.2e-99 367.9 351 56.4
Zm00001eb434410 Zea mays HOM05D002037 ORTHO05D005261 2.8e-99 366.7 429 50.3
Zm00001eb076460 Zea mays HOM05D002037 ORTHO05D005261 8.9e-98 361.7 419 50.1
MBI09_g01931_MAGBIO Magnolia biondii HOM05D002037 ORTHO05D005261 1.5e-97 360.9 417 52.0
Pp3c1_12700 Physcomitrium patens HOM05D002037 ORTHO05D005261 6.6e-93 345.5 417 47.7
Pp3c1_12703 Physcomitrium patens HOM05D002037 ORTHO05D005261 6.6e-93 345.5 417 47.7
MBI09_g40924_MAGBIO Magnolia biondii HOM05D002037 ORTHO05D005261 5.6e-92 342.4 416 48.8
Pp3c2_24840 Physcomitrium patens HOM05D002037 ORTHO05D005261 2.3e-90 337.0 417 46.8
Mapoly0062s0116 Marchantia polymorpha HOM05D002037 ORTHO05D005261 2.3e-85 320.5 429 46.2
AagrBONN_evm.TU.Sc2ySwM_117.676 Anthoceros agrestis HOM05D002037 ORTHO05D005261 2.1e-83 313.9 422 44.1
Lj1g0010809 Lotus japonicus HOM05D002037 ORTHO05D005261 5.2e-74 282.7 283 54.1
Oeu057143.1 Olea europaea HOM05D002037 ORTHO05D005261 8.9e-74 282.0 426 43.0
CBR_g37392 Chara braunii HOM05D002037 ORTHO05D000002 7.8e-70 268.9 388 43.6
Eucgr.C00279 Eucalyptus grandis HOM05D002037 ORTHO05D005261 1.4e-66 258.1 275 54.9
HPP92_025041 Vanilla planifolia HOM05D002037 ORTHO05D005261 4.9e-64 249.6 422 41.7
unitig_26.g8827 Utricularia gibba HOM05D002037 ORTHO05D005261 9.0e-58 228.8 428 37.4
Migut.E01404 Erythranthe guttata HOM05D002037 ORTHO05D005261 8.7e-53 212.2 352 37.5
Migut.E01409 Erythranthe guttata HOM05D002037 ORTHO05D005261 4.0e-50 203.4 459 34.2
Migut.E01403 Erythranthe guttata HOM05D002037 ORTHO05D005261 1.1e-42 178.7 377 32.6
Actinidia25728 Actinidia chinensis HOM05D002037 ORTHO05D005261 1.8e-42 177.9 198 53.0
Hund03252 Selenicereus undatus HOM05D002037 ORTHO05D005261 1.9e-31 141.4 131 55.0
MD08G1134600 Malus domestica HOM05D002037 ORTHO05D005261 4.4e-12 77.0 62 56.5
Cre17.g725450 Chlamydomonas reinhardtii HOM05D002037 ORTHO05D005261 2.6e-09 67.8 208 27.9


User provided reference genes

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