Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17043 Sapria himalayana HOM05D004647 ORTHO05D005349 1.9e-95 352.4 167 100.0
SHI50806 Sapria himalayana HOM05D002447 ORTHO05D001298 2.8e-35 152.5 84 86.9
SHI12698 Sapria himalayana HOM05D007305 ORTHO05D003975 5.3e-34 148.3 74 94.6
SHI17549 Sapria himalayana HOM05D007305 ORTHO05D003975 6.9e-34 147.9 74 95.9
SHI07194 Sapria himalayana HOM05D002539 ORTHO05D002876 1.5e-33 146.7 75 93.3
SHI04553 Sapria himalayana HOM05D000024 ORTHO05D000007 3.8e-32 142.1 74 91.9
SHI14039 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-32 141.7 74 93.2
SHI21071 Sapria himalayana HOM05D007305 ORTHO05D003975 8.8e-29 131.0 73 87.7
SHI08645 Sapria himalayana HOM05D007305 ORTHO05D003975 1.7e-27 126.7 61 100.0
SHI14995 Sapria himalayana HOM05D007305 ORTHO05D009886 8.2e-27 124.4 60 100.0
SHI15904 Sapria himalayana HOM05D000024 ORTHO05D000007 8.2e-27 124.4 60 100.0
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 8.2e-27 124.4 60 100.0
SHI21396 Sapria himalayana HOM05D000002 ORTHO05D009653 8.2e-27 124.4 60 100.0
SHI23199 Sapria himalayana HOM05D007305 ORTHO05D003975 8.2e-27 124.4 60 100.0
SHI30681 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-27 124.4 60 100.0
SHI04012 Sapria himalayana HOM05D000105 ORTHO05D003975 1.4e-26 123.6 73 84.9
SHI14099 Sapria himalayana HOM05D007305 ORTHO05D003975 2.4e-26 122.9 60 98.3
SHI26855 Sapria himalayana HOM05D007305 ORTHO05D003975 2.4e-26 122.9 60 98.3
SHI10179 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-26 121.7 73 79.5
SHI17081 Sapria himalayana HOM05D000002 ORTHO05D001544 5.3e-26 121.7 73 80.8
SHI32977 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-26 120.9 60 98.3
SHI29161 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-25 120.6 61 95.1
SHI06089 Sapria himalayana HOM05D007305 ORTHO05D003975 2.0e-25 119.8 81 75.3
SHI08195 Sapria himalayana HOM05D007305 ORTHO05D003975 2.6e-25 119.4 60 96.7
SHI32091 Sapria himalayana HOM05D000107 ORTHO05D000062 3.4e-25 119.0 62 93.5
SHI17753 Sapria himalayana HOM05D000099 ORTHO05D000205 1.3e-24 117.1 78 80.8
SHI50599 Sapria himalayana HOM05D000035 ORTHO05D003975 1.1e-23 114.0 60 91.7
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 4.2e-23 112.1 66 81.8
SHI13170 Sapria himalayana HOM05D000002 ORTHO05D001544 5.5e-23 111.7 55 98.2
SHI44604 Sapria himalayana HOM05D000035 ORTHO05D000031 9.4e-23 110.9 65 83.1
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 2.1e-22 109.8 54 98.1
SHI32537 Sapria himalayana HOM05D000105 ORTHO05D003975 2.1e-22 109.8 54 98.1
SHI33703 Sapria himalayana HOM05D000024 ORTHO05D000007 2.1e-22 109.8 55 98.2
SHI38445 Sapria himalayana HOM05D000024 ORTHO05D000007 2.7e-22 109.4 55 96.4
SHI00336 Sapria himalayana HOM05D007305 ORTHO05D003975 1.0e-21 107.5 54 96.3
SHI34242 Sapria himalayana HOM05D004560 ORTHO05D005540 1.0e-21 107.5 55 96.4
SHI07315 Sapria himalayana HOM05D007305 ORTHO05D003975 3.9e-21 105.5 52 100.0
SHI18999 Sapria himalayana HOM05D007305 ORTHO05D003975 5.2e-21 105.1 52 98.1
SHI22767 Sapria himalayana HOM05D004573 ORTHO05D003975 5.2e-21 105.1 52 98.1
SHI27666 Sapria himalayana HOM05D000642 ORTHO05D000483 5.2e-21 105.1 56 92.9
SHI21687 Sapria himalayana HOM05D007305 ORTHO05D003975 8.8e-21 104.4 52 98.1
SHI29777 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-21 104.4 54 96.3
SHI41656 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-21 104.4 57 93.0
SHI13090 Sapria himalayana HOM05D007305 ORTHO05D001544 1.1e-20 104.0 54 92.6
SHI12954 Sapria himalayana HOM05D007305 ORTHO05D003975 1.5e-20 103.6 51 100.0
SHI16572 Sapria himalayana HOM05D000347 ORTHO05D000694 1.5e-20 103.6 55 92.7
SHI28529 Sapria himalayana HOM05D007305 ORTHO05D003975 2.0e-20 103.2 53 94.3
SHI21384 Sapria himalayana HOM05D000003 ORTHO05D000126 9.7e-20 100.9 51 98.0
SHI28533 Sapria himalayana HOM05D000105 ORTHO05D000023 9.7e-20 100.9 54 90.7
SHI32516 Sapria himalayana HOM05D000023 ORTHO05D000014 9.7e-20 100.9 62 82.3
SHI26732 Sapria himalayana HOM05D000117 ORTHO05D000070 1.3e-19 100.5 56 91.1
SHI04758 Sapria himalayana HOM05D007305 ORTHO05D003975 2.2e-19 99.8 49 100.0
SHI06173 Sapria himalayana HOM05D004020 ORTHO05D003975 2.2e-19 99.8 58 86.2
SHI15399 Sapria himalayana HOM05D001484 ORTHO05D003975 2.2e-19 99.8 49 100.0
SHI08161 Sapria himalayana HOM05D003992 ORTHO05D004329 2.8e-19 99.4 56 89.3
SHI17939 Sapria himalayana HOM05D007305 ORTHO05D003975 6.3e-19 98.2 54 85.2
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 1.1e-18 97.4 49 98.0
SHI12413 Sapria himalayana HOM05D003943 ORTHO05D004753 1.1e-18 97.4 59 79.7
SHI38650 Sapria himalayana HOM05D000035 ORTHO05D000031 1.1e-18 97.4 58 82.8
SHI27979 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-18 95.9 59 81.4
SHI33179 Sapria himalayana HOM05D007305 ORTHO05D003975 3.1e-18 95.9 55 85.5
SHI22840 Sapria himalayana HOM05D007305 ORTHO05D003975 4.1e-18 95.5 54 85.2
SHI26958 Sapria himalayana HOM05D007305 ORTHO05D003975 5.3e-18 95.1 51 90.2
SHI40705 Sapria himalayana HOM05D007305 ORTHO05D003975 5.3e-18 95.1 54 87.0
SHI09067 Sapria himalayana HOM05D007305 ORTHO05D003975 7.0e-18 94.7 48 95.8
SHI09653 Sapria himalayana HOM05D007305 ORTHO05D003975 9.1e-18 94.4 49 95.9
SHI11922 Sapria himalayana HOM05D000002 ORTHO05D003034 9.1e-18 94.4 55 83.6
SHI27839 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-17 94.0 49 93.9
SHI10685 Sapria himalayana HOM05D000023 ORTHO05D000014 2.0e-17 93.2 65 76.9
SHI24314 Sapria himalayana HOM05D007305 ORTHO05D003975 2.0e-17 93.2 63 73.0
SHI24241 Sapria himalayana HOM05D007305 ORTHO05D003975 2.6e-17 92.8 50 92.0
SHI46130 Sapria himalayana HOM05D000035 ORTHO05D003975 3.5e-17 92.4 52 88.5
SHI38648 Sapria himalayana HOM05D000035 ORTHO05D000031 1.0e-16 90.9 62 75.8
SHI39861 Sapria himalayana HOM05D000035 ORTHO05D000031 1.7e-16 90.1 51 88.2
SHI14031 Sapria himalayana HOM05D007305 ORTHO05D003975 1.5e-15 87.0 46 95.7
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 2.5e-15 86.3 45 93.3
SHI13420 Sapria himalayana HOM05D007305 ORTHO05D003975 4.2e-15 85.5 45 93.3
SHI14194 Sapria himalayana HOM05D007305 ORTHO05D003975 5.5e-15 85.1 43 97.7
SHI47930 Sapria himalayana HOM05D000035 ORTHO05D000031 9.4e-15 84.3 49 87.8
SHI09109 Sapria himalayana HOM05D000726 ORTHO05D000799 4.7e-14 82.0 44 93.2
SHI03242 Sapria himalayana HOM05D004574 ORTHO05D005612 5.2e-13 78.6 46 89.1
SHI11815 Sapria himalayana HOM05D007305 ORTHO05D003975 9.7e-12 74.3 48 72.9
SHI05083 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-11 73.2 42 85.7
SHI29301 Sapria himalayana HOM05D008814 ORTHO05D010812 2.2e-11 73.2 49 77.6
SHI03487 Sapria himalayana HOM05D002033 ORTHO05D003975 6.3e-11 71.6 42 83.3
SHI28769 Sapria himalayana HOM05D007305 ORTHO05D003975 8.2e-11 71.2 36 97.2
SHI03791 Sapria himalayana HOM05D000030 ORTHO05D007344 1.1e-10 70.9 46 78.3
SHI34882 Sapria himalayana HOM05D000392 ORTHO05D000610 5.3e-10 68.6 51 70.6
SHI38313 Sapria himalayana HOM05D000616 ORTHO05D000233 7.0e-10 68.2 40 80.0
SHI21765 Sapria himalayana HOM05D000002 ORTHO05D003975 7.7e-09 64.7 48 70.8
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 1.0e-08 64.3 32 90.6
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 1.0e-08 64.3 32 90.6
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 1.3e-08 63.9 30 93.3
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 1.3e-08 63.9 34 88.2
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 1.7e-08 63.5 30 93.3
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 2.2e-08 63.2 30 93.3
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 2.9e-08 62.8 30 90.0
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 2.9e-08 62.8 30 93.3
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 2.9e-08 62.8 30 93.3
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 3.8e-08 62.4 30 93.3
SHI18873 Sapria himalayana HOM05D005377 ORTHO05D003975 3.8e-08 62.4 39 79.5
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 6.5e-08 61.6 30 90.0
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 6.5e-08 61.6 30 93.3
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 6.5e-08 61.6 30 93.3
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 8.5e-08 61.2 30 93.3
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 8.5e-08 61.2 30 90.0
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 8.5e-08 61.2 30 90.0
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 8.5e-08 61.2 30 93.3
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 8.5e-08 61.2 30 90.0
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 8.5e-08 61.2 30 90.0
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 8.5e-08 61.2 30 90.0
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 8.5e-08 61.2 30 90.0
Dinv02900 Davidia involucrata HOM05D004647 ORTHO05D005349 1.1e-07 60.8 30 93.3
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 1.1e-07 60.8 30 93.3
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 1.5e-07 60.5 30 90.0
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 1.5e-07 60.5 30 90.0
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 1.5e-07 60.5 30 93.3
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 1.5e-07 60.5 29 93.1
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 1.5e-07 60.5 30 93.3
VMungo1215G1703 Vigna mungo HOM05D004647 ORTHO05D005349 1.5e-07 60.5 30 90.0
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 1.9e-07 60.1 30 90.0
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 1.9e-07 60.1 30 86.7
Nn3g16872 Nelumbo nucifera HOM05D004647 ORTHO05D005349 1.9e-07 60.1 30 90.0
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 1.9e-07 60.1 30 90.0
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 2.5e-07 59.7 30 86.7
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 2.5e-07 59.7 34 79.4
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 2.5e-07 59.7 30 86.7
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 3.2e-07 59.3 30 90.0
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 3.2e-07 59.3 30 86.7
MELO3C026290.2 Cucumis melo HOM05D004647 ORTHO05D005349 3.2e-07 59.3 30 90.0
CsaV3_1G001530 Cucumis sativus L. HOM05D004647 ORTHO05D005349 3.2e-07 59.3 30 90.0
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 3.2e-07 59.3 30 86.7
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 3.2e-07 59.3 30 86.7
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 3.2e-07 59.3 30 90.0
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 4.2e-07 58.9 30 86.7
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 4.2e-07 58.9 30 83.3
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 4.2e-07 58.9 30 86.7
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 5.5e-07 58.5 30 86.7
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 5.5e-07 58.5 30 86.7
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 5.5e-07 58.5 30 86.7
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 5.5e-07 58.5 30 90.0
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 5.5e-07 58.5 30 86.7
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 7.2e-07 58.2 30 86.7
CSS0048825 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 7.2e-07 58.2 33 81.8
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 7.2e-07 58.2 30 86.7
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 7.2e-07 58.2 30 83.3
THA.LOC104801749 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 7.2e-07 58.2 30 83.3
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 7.2e-07 58.2 30 83.3
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 7.2e-07 58.2 30 83.3
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 7.2e-07 58.2 32 78.1
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 7.2e-07 58.2 32 81.2
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 9.4e-07 57.8 30 83.3
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 9.4e-07 57.8 30 83.3
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 9.4e-07 57.8 30 83.3
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 9.4e-07 57.8 30 86.7
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 9.4e-07 57.8 30 83.3
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.6e-06 57.0 30 80.0
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 1.6e-06 57.0 30 86.7
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 1.6e-06 57.0 30 83.3
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 2.1e-06 56.6 30 80.0
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 2.1e-06 56.6 30 83.3
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 2.1e-06 56.6 30 83.3
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.1e-06 56.6 30 83.3
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.1e-06 56.6 30 83.3
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.1e-06 56.6 30 83.3
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.1e-06 56.6 30 83.3
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.1e-06 56.6 30 83.3
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 2.7e-06 56.2 30 80.0
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 2.7e-06 56.2 30 83.3
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 3.6e-06 55.8 30 80.0
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 3.6e-06 55.8 30 80.0
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 3.6e-06 55.8 30 83.3
SHI33745 Sapria himalayana HOM05D005377 ORTHO05D003034 3.6e-06 55.8 31 80.6
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 4.7e-06 55.5 30 80.0
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 4.7e-06 55.5 30 83.3
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 4.7e-06 55.5 30 80.0
Sed0007118 Sechium edule HOM05D004647 ORTHO05D005349 4.7e-06 55.5 29 86.2
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 6.1e-06 55.1 32 71.9
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 6.1e-06 55.1 30 83.3
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 8.0e-06 54.7 30 80.0
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 8.0e-06 54.7 30 76.7
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 8.0e-06 54.7 30 76.7
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 8.0e-06 54.7 30 76.7


User provided reference genes

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