Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16563 Sapria himalayana HOM05D000104 ORTHO05D005769 0.0e+00 1145.6 575 100.0
Manes.15G110200 Manihot esculenta HOM05D000104 ORTHO05D005769 1.6e-101 374.4 625 40.8
Potri.003G022100 Populus trichocarpa HOM05D000104 ORTHO05D005769 1.4e-97 361.3 622 42.1
Sabra03G0014100 Salix brachista HOM05D000104 ORTHO05D005769 1.9e-94 350.9 615 40.5
Potri.001G207700 Populus trichocarpa HOM05D000104 ORTHO05D005769 2.4e-94 350.5 594 41.4
Thecc.05G185200 Theobroma cacao HOM05D000104 ORTHO05D005769 9.2e-94 348.6 624 39.3
TWI14G1199 Tripterygium wilfordii HOM05D000104 ORTHO05D005769 1.6e-93 347.8 611 40.8
Sabra01G0160500 Salix brachista HOM05D000104 ORTHO05D005769 3.5e-93 346.7 615 40.8
CiPaw.09G030900 Carya illinoinensis HOM05D000104 ORTHO05D005769 1.7e-92 344.4 617 40.8
Ciclev10010891m.g Citrus clementina HOM05D000104 ORTHO05D005769 4.3e-91 339.7 617 38.2
Duzib177G0813 Durio zibethinus HOM05D000104 ORTHO05D005769 1.2e-90 338.2 605 39.5
TWI23G0183 Tripterygium wilfordii HOM05D000104 ORTHO05D005769 3.1e-89 333.6 617 39.1
Rhsim03G0007000 Rhododendron simsii HOM05D000104 ORTHO05D005769 4.4e-88 329.7 617 38.1
GSVIVG01033511001 Vitis vinifera HOM05D000104 ORTHO05D005769 3.7e-87 326.6 604 39.6
QL07p023509 Quercus lobata HOM05D000104 ORTHO05D005769 1.1e-86 325.1 620 40.2
Dinv19274 Davidia involucrata HOM05D000104 ORTHO05D005769 2.4e-86 323.9 620 38.1
MD10G1206600 Malus domestica HOM05D000104 ORTHO05D005769 3.5e-85 320.1 643 37.5
Gohir.D08G247700 Gossypium hirsutum HOM05D000104 ORTHO05D005769 5.1e-84 316.2 596 39.1
Lalb_Chr21g0316431 Lupinus albus HOM05D000104 ORTHO05D005769 1.1e-83 315.1 594 37.2
CiPaw.10G027000 Carya illinoinensis HOM05D000104 ORTHO05D005769 1.5e-83 314.7 474 43.7
Gorai.004G264200 Gossypium raimondii HOM05D000104 ORTHO05D005769 1.5e-83 314.7 596 38.9
Gohir.A08G227300 Gossypium hirsutum HOM05D000104 ORTHO05D005769 4.3e-83 313.2 593 38.3
RcHm_v2.0_Chr5g0025621 Rosa chinensis HOM05D000104 ORTHO05D005769 9.6e-83 312.0 635 37.0
Actinidia22031 Actinidia chinensis HOM05D000104 ORTHO05D005769 8.9e-81 305.4 467 42.2
vmacro07923 Vaccinium macrocarpon HOM05D000104 ORTHO05D005769 1.7e-79 301.2 616 35.7
CSS0012736 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D005769 2.2e-79 300.8 619 37.5
Prupe.4G135700 Prunus persica HOM05D000104 ORTHO05D005769 4.9e-79 299.7 632 37.2
Haze_19977 Corylus avellana HOM05D000104 ORTHO05D005769 6.4e-79 299.3 575 38.8
VMungo0720G3110 Vigna mungo HOM05D000104 ORTHO05D005769 7.1e-78 295.8 614 36.5
Phvul.007G259200 Phaseolus vulgaris HOM05D000104 ORTHO05D005769 1.6e-77 294.7 546 38.1
ClCG10G017460 Citrullus lanatus HOM05D000104 ORTHO05D005769 1.0e-76 292.0 537 37.2
Glyma.02G174100 Glycine max HOM05D000104 ORTHO05D005769 3.0e-76 290.4 614 36.2
CsaV3_3G038900 Cucumis sativus L. HOM05D000104 ORTHO05D005769 5.1e-76 289.7 609 35.5
CANSAT64G2572 Cannabis sativa HOM05D000104 ORTHO05D005769 1.5e-75 288.1 624 35.9
Sed0011551 Sechium edule HOM05D000104 ORTHO05D005769 1.9e-75 287.7 613 35.1
FAN21G3997 Fragaria x ananassa HOM05D000104 ORTHO05D005769 5.6e-75 286.2 628 35.8
Glyma.09G112200 Glycine max HOM05D000104 ORTHO05D005769 2.1e-74 284.3 615 36.4
TAR381G0643 Trochodendron aralioides HOM05D000104 ORTHO05D005769 2.1e-74 284.3 604 37.4
FAN25G3235 Fragaria x ananassa HOM05D000104 ORTHO05D005769 3.6e-74 283.5 629 35.5
Nn5g28295 Nelumbo nucifera HOM05D000104 ORTHO05D005769 3.6e-74 283.5 603 38.5
MELO3C009633.2 Cucumis melo HOM05D000104 ORTHO05D005769 6.2e-74 282.7 635 34.6
FAN16G1962 Fragaria x ananassa HOM05D000104 ORTHO05D005769 5.3e-73 279.6 627 35.2
Lj3A921G41 Lonicera japonica HOM05D000104 ORTHO05D005769 1.2e-72 278.5 624 35.1
Cpa.g.sc34.20 Carica papaya HOM05D000104 ORTHO05D005769 3.8e-71 273.5 474 42.0
FvH4_3g15170 Fragaria vesca HOM05D000104 ORTHO05D005769 6.4e-71 272.7 630 34.9
Lj3C919G8 Lonicera japonica HOM05D000104 ORTHO05D005769 6.4e-71 272.7 612 35.8
FAN11G3896 Fragaria x ananassa HOM05D000104 ORTHO05D005769 8.4e-71 272.3 630 34.9
Sp3g10970 Schrenkiella parvula HOM05D000104 ORTHO05D005769 8.4e-71 272.3 612 36.4
Carub.0003s1218 Capsella rubella HOM05D000104 ORTHO05D005769 3.2e-70 270.4 557 38.4
Psat4g106680 Pisum sativum HOM05D000104 ORTHO05D005769 4.2e-70 270.0 598 36.0
Thhalv10019875m.g Eutrema salsugineum HOM05D000104 ORTHO05D005769 7.1e-70 269.2 551 37.4
Peaxi162Scf00258g00432 Petunia axillaris HOM05D000104 ORTHO05D005769 4.6e-69 266.5 607 35.9
AL3G24490 Arabidopsis lyrata HOM05D000104 ORTHO05D005769 7.9e-69 265.8 608 35.2
Cc06_g16020 Coffea canephora HOM05D000104 ORTHO05D005769 1.0e-68 265.4 620 34.8
PGR142G4395 Punica granatum HOM05D000104 ORTHO05D005769 1.3e-68 265.0 603 34.0
BraA05t22469Z Brassica rapa HOM05D000104 ORTHO05D005769 1.8e-68 264.6 548 37.4
BcaC05g29235 Brassica carinata HOM05D000104 ORTHO05D005769 5.1e-68 263.1 549 37.7
AT3G12810 Arabidopsis thaliana HOM05D000104 ORTHO05D005769 1.1e-67 261.9 608 35.2
A05p36660 Brassica napus HOM05D000104 ORTHO05D005769 1.1e-67 261.9 548 37.0
C05p55090 Brassica napus HOM05D000104 ORTHO05D005769 1.1e-67 261.9 549 37.7
Medtr1g053955 Medicago truncatula HOM05D000104 ORTHO05D005769 1.9e-67 261.2 589 35.8
CAN.G570.8 Capsicum annuum HOM05D000104 ORTHO05D005769 2.5e-67 260.8 612 34.8
BolC5t34177H Brassica oleracea HOM05D000104 ORTHO05D005769 5.6e-67 259.6 548 37.8
Ca_25705_v3 Cicer arietinum L. HOM05D000104 ORTHO05D005769 1.3e-66 258.5 587 35.4
Sopen03g015780 Solanum pennellii HOM05D000104 ORTHO05D005769 3.6e-66 256.9 615 33.8
Oeu033742.2 Olea europaea HOM05D000104 ORTHO05D005769 9.0e-65 252.3 555 35.1
Solyc03g063210.3 Solanum lycopersicum HOM05D000104 ORTHO05D005769 2.0e-64 251.1 610 33.9
THA.LOC104826283 Tarenaya hassleriana HOM05D000104 ORTHO05D005769 2.6e-64 250.8 613 34.7
Aqoxy4G02068 Aquilegia oxysepala HOM05D000104 ORTHO05D005769 3.4e-64 250.4 621 34.5
TPR.G27751 Trifolium pratense HOM05D000104 ORTHO05D005769 9.9e-64 248.8 594 34.8
CARHR087340 Cardamine hirsuta HOM05D000104 ORTHO05D005769 1.3e-63 248.4 553 36.2
Atru.chr8.1090 Acer truncatum HOM05D000104 ORTHO05D005769 2.9e-63 247.3 337 45.4
DCAR_006645 Daucus carota HOM05D000104 ORTHO05D005769 4.9e-63 246.5 602 34.2
Hund17598 Selenicereus undatus HOM05D000104 ORTHO05D005769 4.2e-62 243.4 625 33.9
BcaB06g25509 Brassica carinata HOM05D000104 ORTHO05D005769 5.5e-62 243.0 557 35.5
Actinidia40431 Actinidia chinensis HOM05D000104 ORTHO05D005769 4.6e-61 240.0 408 38.0
Migut.J01827 Erythranthe guttata HOM05D000104 ORTHO05D005769 5.1e-60 236.5 599 33.6
Nitab4.5_0003890g0010 Nicotiana tabacum HOM05D000104 ORTHO05D005769 8.7e-60 235.7 614 33.1
Sc11g0006160 Simmondsia chinensis HOM05D000104 ORTHO05D005769 9.6e-59 232.3 600 32.7
MBI16_g14599_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 1.1e-57 228.8 626 33.1
EL10Ac3g07414 Beta vulgaris HOM05D000104 ORTHO05D005769 2.4e-57 227.6 545 34.5
Nitab4.5_0000324g0210 Nicotiana tabacum HOM05D000104 ORTHO05D005769 2.4e-57 227.6 470 37.2
AUR62018509 Chenopodium quinoa HOM05D000104 ORTHO05D005769 2.0e-56 224.6 504 34.1
Eucgr.K01834 Eucalyptus grandis HOM05D000104 ORTHO05D005769 2.0e-56 224.6 600 32.7
Aa31LG8G90 Aethionema arabicum HOM05D000104 ORTHO05D005769 5.8e-56 223.0 555 34.2
MBI10_g00717_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 7.6e-56 222.6 505 34.5
MBI10_g44388_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 2.9e-55 220.7 523 35.0
MSTRG.19900 Avicennia marina HOM05D000104 ORTHO05D005769 6.5e-55 219.5 623 32.3
Os02g0689800 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D005769 1.6e-53 214.9 574 33.1
ECA248G0087 Erigeron canadensis HOM05D000104 ORTHO05D005769 2.3e-52 211.1 601 32.3
SalBow6G1274 Salvia bowleyana HOM05D000104 ORTHO05D005769 2.3e-52 211.1 614 32.7
COL.COLO4_22907 Corchorus olitorius HOM05D000104 ORTHO05D005769 3.0e-52 210.7 455 36.7
PSO170G6710 Papaver somniferum HOM05D000104 ORTHO05D005769 5.1e-52 209.9 601 31.9
HanXRQChr11g0348031 Helianthus annuus HOM05D000104 ORTHO05D005769 1.5e-51 208.4 524 33.8
Lsat_1_v5_gn_1_55460 Lactuca sativa HOM05D000104 ORTHO05D005769 1.9e-51 208.0 540 32.2
PSO528G0284 Papaver somniferum HOM05D000104 ORTHO05D005769 3.3e-51 207.2 487 34.5
Ah.13g077720 Amaranthus hybridus HOM05D000104 ORTHO05D005769 9.0e-49 199.1 631 30.7
CDE05G2237 Ceratophyllum demersum HOM05D000104 ORTHO05D005769 9.0e-49 199.1 526 33.3
HanXRQChr01g0026921 Helianthus annuus HOM05D000104 ORTHO05D005769 1.5e-48 198.4 408 34.1
SGA_v2.0_scaffold69G23071 Striga asiatica HOM05D000104 ORTHO05D005769 1.0e-47 195.7 491 31.6
Zm00001eb251100 Zea mays HOM05D000104 ORTHO05D005769 1.0e-47 195.7 571 31.7
SGA_v2.0_scaffold105G30483 Striga asiatica HOM05D000104 ORTHO05D005769 1.9e-46 191.4 559 31.1
HPP92_024595 Vanilla planifolia HOM05D000104 ORTHO05D005769 1.0e-44 185.7 462 33.5
Lj5g0023468 Lotus japonicus HOM05D000104 ORTHO05D005769 1.9e-43 181.4 258 45.3
Zm00001eb187690 Zea mays HOM05D000104 ORTHO05D005769 2.5e-43 181.0 598 30.1
ATR1152G044 Amborella trichopoda HOM05D000104 ORTHO05D005769 3.1e-41 174.1 403 34.2
Oeu040390.1 Olea europaea HOM05D000104 ORTHO05D005769 2.2e-39 167.9 135 59.3
unitig_26.g9068 Utricularia gibba HOM05D000104 ORTHO05D005769 3.8e-39 167.2 406 33.5
AagrBONN_evm.TU.Sc2ySwM_340.21 Anthoceros agrestis HOM05D000104 ORTHO05D005769 5.3e-25 120.2 265 32.8
Pp3c10_13800 Physcomitrium patens HOM05D000104 ORTHO05D005769 1.2e-24 119.0 513 28.1
Pp3c3_30220 Physcomitrium patens HOM05D000104 ORTHO05D005769 1.7e-23 115.2 195 34.4
Mapoly0111s0052 Marchantia polymorpha HOM05D000104 ORTHO05D005769 3.6e-21 107.5 551 26.7
CBR_g19274 Chara braunii HOM05D000104 ORTHO05D005769 2.3e-20 104.8 198 33.8
Psat3g174280 Pisum sativum HOM05D001700 ORTHO05D005769 7.2e-06 56.6 32 71.9


User provided reference genes

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