Gene: PGR142G4395

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR142G4395
  • Transcript Identifier PGR142G4395.03
  • Gene Type Coding gene
  • Location NC_045128.1 : 39616170-39627111 : negative

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031381126.1
  • name LOC116195877
  • name XM_031525266.1
  • id gene-LOC116195877
  • uniprot A0A6P8CI57

Descriptions

  • product protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048441
ISO
PLAZA Integrative Orthologypetal development AT3G12810
GO:0048451
ISO
PLAZA Integrative Orthologypetal formation AT3G12810
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G12810
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G12810
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT3G12810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G12810
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc03g063220.2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G12810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014012 Helicase/SANT-associated domain
IPR001650 Helicase, C-terminal
IPR038718 SNF2-like, N-terminal domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR009057 Homeobox-like domain superfamily
IPR000330 SNF2, N-terminal
Mapman id Description
12.4.4.1 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.ATPase component PIE1