Gene: vmacro07923

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro07923
  • Transcript Identifier vmacro07923-RA
  • Gene Type Coding gene
  • Location chr2_Vaccinium_macrocarpon_Stevens_v1 : 36665747-36673450 : positive

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro07923_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to PIE1: Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048441
ISO
PLAZA Integrative Orthologypetal development AT3G12810
GO:0048451
ISO
PLAZA Integrative Orthologypetal formation AT3G12810
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT3G12810
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G12810
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT3G12810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000104
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G12810
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc03g063220.2
GO:0070615
ISO
PLAZA Homology (enrichment)nucleosome-dependent ATPase activity HOM05D000104

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G12810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR009057 Homeobox-like domain superfamily
Mapman id Description
12.4.4.1 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.ATPase component PIE1