Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16003 Sapria himalayana HOM05D000147 ORTHO05D002466 1.0e-213 746.5 377 100.0
Oeu035548.1 Olea europaea HOM05D000147 ORTHO05D002466 3.1e-13 80.5 155 38.1
Sp1g06900 Schrenkiella parvula HOM05D000147 ORTHO05D002466 1.2e-12 78.6 155 37.4
MSTRG.21048 Avicennia marina HOM05D000147 ORTHO05D002466 2.6e-12 77.4 155 36.8
Manes.04G005000 Manihot esculenta HOM05D000147 ORTHO05D002466 3.4e-12 77.0 155 37.4
Nn6g34958 Nelumbo nucifera HOM05D000147 ORTHO05D002466 4.4e-12 76.6 157 38.2
Duzib168G2031 Durio zibethinus HOM05D000147 ORTHO05D002466 5.8e-12 76.3 161 37.9
Migut.N02496 Erythranthe guttata HOM05D000147 ORTHO05D002466 5.8e-12 76.3 157 36.3
Sabra09G0111900 Salix brachista HOM05D000147 ORTHO05D002466 5.8e-12 76.3 155 36.8
Oeu031486.1 Olea europaea HOM05D000147 ORTHO05D002466 7.6e-12 75.9 155 36.1
SGA_v2.0_scaffold83G26401 Striga asiatica HOM05D000147 ORTHO05D002466 9.9e-12 75.5 164 34.8
CARHR008120 Cardamine hirsuta HOM05D000147 ORTHO05D002466 1.3e-11 75.1 156 38.5
Cpa.g.sc32.109 Carica papaya HOM05D000147 ORTHO05D002466 1.3e-11 75.1 159 37.1
Dinv06776 Davidia involucrata HOM05D000147 ORTHO05D002466 1.3e-11 75.1 157 36.9
Potri.004G184500 Populus trichocarpa HOM05D000147 ORTHO05D002466 1.3e-11 75.1 155 36.1
Sabra09G0114600 Salix brachista HOM05D000147 ORTHO05D002466 1.3e-11 75.1 155 36.8
Gohir.A09G094800 Gossypium hirsutum HOM05D000147 ORTHO05D002466 1.7e-11 74.7 159 37.7
Gohir.D09G094700 Gossypium hirsutum HOM05D000147 ORTHO05D002466 1.7e-11 74.7 159 37.7
Gorai.006G111300 Gossypium raimondii HOM05D000147 ORTHO05D002466 1.7e-11 74.7 159 37.7
Manes.11G160400 Manihot esculenta HOM05D000147 ORTHO05D002466 1.7e-11 74.7 155 36.8
unitig_8.g3661 Utricularia gibba HOM05D000147 ORTHO05D002466 1.7e-11 74.7 155 37.4
ClCG02G022210 Citrullus lanatus HOM05D000147 ORTHO05D002466 2.2e-11 74.3 157 37.6
MELO3C021413.2 Cucumis melo HOM05D000147 ORTHO05D002466 2.2e-11 74.3 157 37.6
CsaV3_6G015070 Cucumis sativus L. HOM05D000147 ORTHO05D002466 2.2e-11 74.3 157 37.6
Dinv02038 Davidia involucrata HOM05D000147 ORTHO05D002466 2.2e-11 74.3 157 36.9
Sed0002851 Sechium edule HOM05D000147 ORTHO05D002466 2.2e-11 74.3 157 37.6
PSO339G2980 Papaver somniferum HOM05D000147 ORTHO05D002466 2.9e-11 73.9 155 35.5
BcaB01g03080 Brassica carinata HOM05D000147 ORTHO05D002466 3.8e-11 73.6 156 36.5
TAR633G1291 Trochodendron aralioides HOM05D000147 ORTHO05D002466 3.8e-11 73.6 157 36.9
VMungo1127G2211 Vigna mungo HOM05D000147 ORTHO05D002466 3.8e-11 73.6 157 36.9
Aqoxy4G02817 Aquilegia oxysepala HOM05D000147 ORTHO05D002466 4.9e-11 73.2 157 36.3
MBI05_g38960_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D002466 4.9e-11 73.2 157 36.9
BraA03t11863Z Brassica rapa HOM05D000147 ORTHO05D002466 6.4e-11 72.8 157 36.3
FvH4_3g24610 Fragaria vesca HOM05D000147 ORTHO05D002466 6.4e-11 72.8 157 36.9
FAN11G0744 Fragaria x ananassa HOM05D000147 ORTHO05D002466 6.4e-11 72.8 157 36.9
FAN16G1236 Fragaria x ananassa HOM05D000147 ORTHO05D002466 6.4e-11 72.8 157 36.9
FAN21G3908 Fragaria x ananassa HOM05D000147 ORTHO05D002466 6.4e-11 72.8 157 36.9
FAN25G0281 Fragaria x ananassa HOM05D000147 ORTHO05D002466 6.4e-11 72.8 157 36.9
Lj3g0018056 Lotus japonicus HOM05D000147 ORTHO05D002466 6.4e-11 72.8 157 36.9
Prupe.6G127200 Prunus persica HOM05D000147 ORTHO05D002466 6.4e-11 72.8 157 36.9
RcHm_v2.0_Chr5g0044161 Rosa chinensis HOM05D000147 ORTHO05D002466 6.4e-11 72.8 157 36.9
SGA_v2.0_scaffold22G09878 Striga asiatica HOM05D000147 ORTHO05D002466 6.4e-11 72.8 155 35.5
TAR369G0325 Trochodendron aralioides HOM05D000147 ORTHO05D002466 6.4e-11 72.8 82 47.6
A03p26500 Brassica napus HOM05D000147 ORTHO05D002466 1.1e-10 72.0 157 36.3
Thhalv10016678m.g Eutrema salsugineum HOM05D000147 ORTHO05D002466 1.1e-10 72.0 159 35.8
Sabra04G0124200 Salix brachista HOM05D000147 ORTHO05D002466 1.1e-10 72.0 80 45.0
Sp4g10420 Schrenkiella parvula HOM05D000147 ORTHO05D002466 1.1e-10 72.0 159 35.8
Cfa010044 Carpinus fangiana HOM05D000015 ORTHO05D002466 1.4e-10 71.6 159 37.7
DCAR_006346 Daucus carota HOM05D000147 ORTHO05D002466 1.4e-10 71.6 157 36.3
Dinv29463 Davidia involucrata HOM05D000147 ORTHO05D002466 1.4e-10 71.6 157 36.3
Glyma.11G184700 Glycine max HOM05D000147 ORTHO05D002466 1.4e-10 71.6 158 36.1
Glyma.12G087700 Glycine max HOM05D000147 ORTHO05D002466 1.4e-10 71.6 158 36.1
Solyc11g067230.2 Solanum lycopersicum HOM05D000147 ORTHO05D002466 1.4e-10 71.6 158 37.3
Solyc11g067240.2 Solanum lycopersicum HOM05D000147 ORTHO05D002466 1.4e-10 71.6 158 37.3
Sopen11g026920 Solanum pennellii HOM05D000147 ORTHO05D002466 1.4e-10 71.6 158 37.3
Sopen11g026930 Solanum pennellii HOM05D000147 ORTHO05D002466 1.4e-10 71.6 158 37.3
CANSAT54G2165 Cannabis sativa HOM05D000147 ORTHO05D002466 1.9e-10 71.2 159 35.8
MD03G1141900 Malus domestica HOM05D000147 ORTHO05D002466 1.9e-10 71.2 157 36.3
Sc12g0004390 Simmondsia chinensis HOM05D000147 ORTHO05D002466 1.9e-10 71.2 157 36.3
ATR0222G015 Amborella trichopoda HOM05D000147 ORTHO05D002466 2.4e-10 70.9 158 38.0
CAN.G730.38 Capsicum annuum HOM05D000147 ORTHO05D002466 2.4e-10 70.9 220 31.4
Ca_19392_v3 Cicer arietinum L. HOM05D000147 ORTHO05D002466 2.4e-10 70.9 157 35.7
MD11G1161300 Malus domestica HOM05D000147 ORTHO05D002466 2.4e-10 70.9 157 36.3
PGSC0003DMG401007403 Solanum tuberosum HOM05D000147 ORTHO05D002466 2.4e-10 70.9 158 37.3
AT2G27600 Arabidopsis thaliana HOM05D000147 ORTHO05D002466 3.2e-10 70.5 159 37.1
BcaC02g10892 Brassica carinata HOM05D000147 ORTHO05D002466 3.2e-10 70.5 156 39.1
C04p24010 Brassica napus HOM05D000147 ORTHO05D002466 3.2e-10 70.5 156 39.1
CARHR120220 Cardamine hirsuta HOM05D000147 ORTHO05D002466 3.2e-10 70.5 159 37.1
Potri.009G144300 Populus trichocarpa HOM05D000147 ORTHO05D002466 3.2e-10 70.5 155 35.5
SalBow6G5635 Salvia bowleyana HOM05D000147 ORTHO05D002466 3.2e-10 70.5 82 46.3
AL4G22800 Arabidopsis lyrata HOM05D000147 ORTHO05D002466 4.1e-10 70.1 159 37.1
Carub.0004s0826 Capsella rubella HOM05D000147 ORTHO05D002466 4.1e-10 70.1 159 37.1
Lj3g0021639 Lotus japonicus HOM05D000147 ORTHO05D002466 4.1e-10 70.1 158 34.8
PGSC0003DMG403007403 Solanum tuberosum HOM05D000147 ORTHO05D002466 4.1e-10 70.1 83 48.2
CSS0009578 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D002466 5.4e-10 69.7 156 35.9
CAN.G534.20 Capsicum annuum HOM05D000147 ORTHO05D002466 5.4e-10 69.7 96 43.8
BcaC01g04952 Brassica carinata HOM05D000147 ORTHO05D002466 7.1e-10 69.3 160 37.5
C03p31780 Brassica napus HOM05D000147 ORTHO05D002466 7.1e-10 69.3 160 37.5
BolC3t15521H Brassica oleracea HOM05D000147 ORTHO05D002466 7.1e-10 69.3 160 37.5
Ciclev10028483m.g Citrus clementina HOM05D000147 ORTHO05D002466 7.1e-10 69.3 160 35.0
Gohir.D05G084800 Gossypium hirsutum HOM05D000147 ORTHO05D002466 7.1e-10 69.3 161 36.0
Gorai.009G086700 Gossypium raimondii HOM05D000147 ORTHO05D002466 7.1e-10 69.3 161 36.0
Lj1A242G15 Lonicera japonica HOM05D000147 ORTHO05D002466 7.1e-10 69.3 158 36.7
Phvul.011G092700 Phaseolus vulgaris HOM05D000147 ORTHO05D002466 7.1e-10 69.3 159 36.5
BolC4t23895H Brassica oleracea HOM05D000147 ORTHO05D002466 9.2e-10 68.9 81 51.9
CAN.G919.20 Capsicum annuum HOM05D000147 ORTHO05D002466 9.2e-10 68.9 158 35.4
CiPaw.13G138000 Carya illinoinensis HOM05D000147 ORTHO05D002466 9.2e-10 68.9 161 36.6
Gorai.004G009400 Gossypium raimondii HOM05D000147 ORTHO05D002466 9.2e-10 68.9 162 36.4
Lj2A30T111 Lonicera japonica HOM05D000147 ORTHO05D002466 9.2e-10 68.9 82 46.3
Nitab4.5_0002609g0010 Nicotiana tabacum HOM05D000147 ORTHO05D002466 9.2e-10 68.9 158 35.4
Nitab4.5_0008508g0010 Nicotiana tabacum HOM05D000147 ORTHO05D002466 9.2e-10 68.9 158 35.4
Peaxi162Scf00173g00822 Petunia axillaris HOM05D000147 ORTHO05D002466 9.2e-10 68.9 292 28.4
Duzib150G0715 Durio zibethinus HOM05D000147 ORTHO05D002466 1.6e-09 68.2 161 35.4
Hma1.2p1_0305F.1_g119650 Hydrangea macrophylla HOM05D000147 ORTHO05D002466 1.6e-09 68.2 159 35.8
Lj1C234G0 Lonicera japonica HOM05D000147 ORTHO05D002466 1.6e-09 68.2 95 44.2
QL04p043697 Quercus lobata HOM05D000147 ORTHO05D002466 1.6e-09 68.2 96 44.8
Thecc.09G286100 Theobroma cacao HOM05D000147 ORTHO05D002466 1.6e-09 68.2 161 35.4
Actinidia37086 Actinidia chinensis HOM05D000147 ORTHO05D002466 2.1e-09 67.8 159 35.8
CiPaw.13G137700 Carya illinoinensis HOM05D000147 ORTHO05D002466 2.1e-09 67.8 161 36.6
Gohir.D08G015000 Gossypium hirsutum HOM05D000147 ORTHO05D002466 2.1e-09 67.8 162 35.8
PSO339G4129 Papaver somniferum HOM05D000147 ORTHO05D002466 2.1e-09 67.8 159 35.8
PSO384G2193 Papaver somniferum HOM05D000147 ORTHO05D002466 2.1e-09 67.8 159 35.8
Psat5g256680 Pisum sativum HOM05D000147 ORTHO05D002466 2.1e-09 67.8 162 35.2
Sabra10G0185600 Salix brachista HOM05D000147 ORTHO05D002466 2.1e-09 67.8 160 36.2
TWI75G0574 Tripterygium wilfordii HOM05D000147 ORTHO05D002466 2.1e-09 67.8 157 35.0
Haze_23403 Corylus avellana HOM05D000147 ORTHO05D002466 2.7e-09 67.4 84 46.4
Hund20873 Selenicereus undatus HOM05D000147 ORTHO05D002466 3.5e-09 67.0 159 35.8
Lalb_Chr19g0136611 Lupinus albus HOM05D000147 ORTHO05D002466 4.6e-09 66.6 157 34.4
HPP92_002965 Vanilla planifolia HOM05D000147 ORTHO05D002466 4.6e-09 66.6 156 35.9
Thecc.10G108400 Theobroma cacao HOM05D000147 ORTHO05D002466 6.0e-09 66.2 155 35.5
HanXRQChr01g0024251 Helianthus annuus HOM05D000147 ORTHO05D002466 7.8e-09 65.9 157 35.7
Nitab4.5_0001437g0230 Nicotiana tabacum HOM05D000147 ORTHO05D002466 7.8e-09 65.9 221 30.8
Nitab4.5_0010239g0020 Nicotiana tabacum HOM05D000147 ORTHO05D002466 7.8e-09 65.9 221 30.8
Atru.chr3.3297 Acer truncatum HOM05D000147 ORTHO05D002466 1.0e-08 65.5 161 34.8
Ah.08g215850 Amaranthus hybridus HOM05D000147 ORTHO05D002466 1.3e-08 65.1 158 36.1
arahy.Tifrunner.gnm1.ann1.BN4VGF Arachis hypogaea HOM05D000147 ORTHO05D002466 1.3e-08 65.1 86 41.9
CANSAT56G0230 Cannabis sativa HOM05D000147 ORTHO05D002466 1.3e-08 65.1 156 35.9
Gohir.A08G004700 Gossypium hirsutum HOM05D000147 ORTHO05D002466 1.3e-08 65.1 162 35.2
Nitab4.5_0009385g0010 Nicotiana tabacum HOM05D000147 ORTHO05D002466 1.3e-08 65.1 158 37.3
Potri.010G237100 Populus trichocarpa HOM05D000147 ORTHO05D002466 1.3e-08 65.1 159 35.2
Duzib170G0655 Durio zibethinus HOM05D000147 ORTHO05D002466 1.7e-08 64.7 161 34.8
ECA232G0849 Erigeron canadensis HOM05D001201 ORTHO05D001100 1.7e-08 64.7 159 34.0
Rhsim01G0206200 Rhododendron simsii HOM05D000147 ORTHO05D002466 1.7e-08 64.7 83 47.0
Actinidia35457 Actinidia chinensis HOM05D003901 ORTHO05D002466 2.3e-08 64.3 159 35.2
EL10Ac7g15804 Beta vulgaris HOM05D000147 ORTHO05D002466 2.3e-08 64.3 158 36.1
SMO147G0250 Selaginella moellendorffii HOM05D000147 ORTHO05D002466 2.3e-08 64.3 86 45.3
ECA248G0168 Erigeron canadensis HOM05D003642 ORTHO05D002466 3.9e-08 63.5 158 36.1
Eucgr.B03874 Eucalyptus grandis HOM05D000147 ORTHO05D002466 3.9e-08 63.5 131 36.6
SEGI_23695 Sequoiadendron giganteum HOM05D000147 ORTHO05D002466 5.1e-08 63.2 162 36.4
Ah.15g095700 Amaranthus hybridus HOM05D000147 ORTHO05D002466 6.6e-08 62.8 158 36.1
AUR62039225 Chenopodium quinoa HOM05D000147 ORTHO05D002466 8.6e-08 62.4 160 35.6
CSS0029769 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D002466 1.9e-07 61.2 126 36.5
HanXRQChr01g0024261 Helianthus annuus HOM05D000147 ORTHO05D002466 1.9e-07 61.2 82 43.9
Os01g0141100 Oryza sativa ssp. japonica HOM05D000147 ORTHO05D002466 1.9e-07 61.2 171 30.4
GSVIVG01036166001 Vitis vinifera HOM05D000147 ORTHO05D002466 1.9e-07 61.2 128 37.5
Cfa011254 Carpinus fangiana HOM05D000147 ORTHO05D002466 4.3e-07 60.1 156 35.3
Sabra08G0045900 Salix brachista HOM05D000002 ORTHO05D000047 5.6e-07 59.7 43 69.8
Sabra16G0314700 Salix brachista HOM05D000002 ORTHO05D000047 5.6e-07 59.7 43 69.8
Sabra17G0041500 Salix brachista HOM05D000002 ORTHO05D000047 5.6e-07 59.7 43 69.8
TAR623G0337 Trochodendron aralioides HOM05D000147 ORTHO05D002466 5.6e-07 59.7 163 35.0
Actinidia07236 Actinidia chinensis HOM05D000147 ORTHO05D002466 7.3e-07 59.3 81 40.7
GSVIVG01011251001 Vitis vinifera HOM05D000147 ORTHO05D002466 7.3e-07 59.3 125 36.8
Potri.008G022216 Populus trichocarpa HOM05D000147 ORTHO05D002466 9.6e-07 58.9 159 34.0
ECA233G2901 Erigeron canadensis HOM05D000147 ORTHO05D002466 1.2e-06 58.5 160 33.1
Lsat_1_v5_gn_0_7500 Lactuca sativa HOM05D000147 ORTHO05D002466 1.2e-06 58.5 159 34.0
Peaxi162Scf00086g02522 Petunia axillaris HOM05D000147 ORTHO05D002466 1.2e-06 58.5 162 34.6
Pp3c1_1310 Physcomitrium patens HOM05D000147 ORTHO05D002466 1.2e-06 58.5 164 33.5
Potri.008G022300 Populus trichocarpa HOM05D000147 ORTHO05D002466 1.2e-06 58.5 159 34.0
Aa31LG5G8310 Aethionema arabicum HOM05D000147 ORTHO05D002466 1.6e-06 58.2 162 35.2
CSS0027283 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D002466 1.6e-06 58.2 126 36.5
Cfa009798 Carpinus fangiana HOM05D000147 ORTHO05D002466 1.6e-06 58.2 84 45.2
Sabra09G0110300 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-06 58.2 43 67.4
BcaB07g34069 Brassica carinata HOM05D000147 ORTHO05D002466 2.1e-06 57.8 155 33.5
AT1G08270 Arabidopsis thaliana HOM05D000147 ORTHO05D002466 2.8e-06 57.4 80 43.8
CDE08G0126 Ceratophyllum demersum HOM05D000147 ORTHO05D002466 2.8e-06 57.4 56 50.0
Lsat_1_v5_gn_1_61700 Lactuca sativa HOM05D000147 ORTHO05D002466 2.8e-06 57.4 163 33.1
Psat7g188560 Pisum sativum HOM05D000147 ORTHO05D002466 2.8e-06 57.4 160 34.4
Thhalv10007683m.g Eutrema salsugineum HOM05D000147 ORTHO05D002466 3.6e-06 57.0 162 35.2
arahy.Tifrunner.gnm1.ann1.761KJ5 Arachis hypogaea HOM05D000147 ORTHO05D002466 4.7e-06 56.6 161 33.5
Pp3c2_35940 Physcomitrium patens HOM05D000147 ORTHO05D002466 4.7e-06 56.6 165 32.1
C05p06370 Brassica napus HOM05D000147 ORTHO05D002466 6.2e-06 56.2 157 32.5
BolC5t29392H Brassica oleracea HOM05D000147 ORTHO05D002466 6.2e-06 56.2 157 32.5
Migut.D02352 Erythranthe guttata HOM05D000147 ORTHO05D002466 6.2e-06 56.2 159 33.3
Oeu051614.1 Olea europaea HOM05D000147 ORTHO05D002466 6.2e-06 56.2 124 36.3
Nn2g14110 Nelumbo nucifera HOM05D000147 ORTHO05D002466 8.1e-06 55.8 157 33.1
Oeu011740.1 Olea europaea HOM05D000147 ORTHO05D002466 8.1e-06 55.8 124 36.3
QL04p077827 Quercus lobata HOM05D000147 ORTHO05D002466 8.1e-06 55.8 78 41.0
Zm00001eb335640 Zea mays HOM05D000147 ORTHO05D002466 8.1e-06 55.8 162 33.3


User provided reference genes

Program Settings