Gene: Potri.004G184500

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.004G184500
  • Transcript Identifier Potri.004G184500.1
  • Gene Type Coding gene
  • Location Chr04 : 19807521-19812394 : positive

Gene Family Information

  • ID HOM05D000147
  • #Genes/#Species 2513/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.004G184500.v4.1
  • pacid 42794631
  • synonym eugene3.00041444

Descriptions

  • Description K12196 - vacuolar protein-sorting-associated protein 4 (VPS4)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
ISO
PLAZA Integrative Orthologyvesicle-mediated transport AT2G27600
GO:0007032
ISO
PLAZA Integrative Orthologyendosome organization AT2G27600
GO:0055075
ISO
PLAZA Integrative Orthologypotassium ion homeostasis AT2G27600
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT2G27600
GO:0055078
ISO
PLAZA Integrative Orthologysodium ion homeostasis AT2G27600
GO:0010091
ISO
PLAZA Integrative Orthologytrichome branching AT2G27600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G27600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G27600
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G27600
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G27600
GO:0005771
ISO
PLAZA Integrative Orthologymultivesicular body AT2G27600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036181 MIT domain superfamily
IPR007330 MIT domain
IPR015415 Vps4 oligomerisation, C-terminal
IPR003593 AAA+ ATPase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
Mapman id Description
19.4.2.2 Protein homeostasis.proteolysis.serine-type peptidase activities.S10-class serine carboxypeptidase (SCPL)
22.4.1.4.1 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.VPS4-VTA1 ESCRT-disassembly complex.ATPase component VPS4/SKD1