Gene: Sopen11g026920
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g026920
- Transcript Identifier Sopen11g026920.1
- Gene Type Coding gene
- Location Spenn-ch11 : 62729026-62734181 : negative
Gene Family Information
- ID HOM05D000147
- #Genes/#Species 2513/100
- Phylogenetic origin
- ID ORTHO05D002466
- #Genes/#Species 285/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen11g026920.1
Descriptions
- Description Encodes a SKD1 (Suppressor of K Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function. | SUPPRESSOR OF K TRANSPORT GROWTH DEFECT1 (SKD1) | FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding | INVOLVED IN: vesicle-mediated transport, endosome organization | LOCATED IN: cytoplasm, multivesicular body | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ATPase, AAA-type, core , ATPase, AAA-type, conserved site , Vps4 oligomerisation, C-terminal , MIT | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.4.2.2 | Protein homeostasis.proteolysis.serine-type peptidase activities.S10-class serine carboxypeptidase (SCPL) |
| 22.4.1.4.1 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.VPS4-VTA1 ESCRT-disassembly complex.ATPase component VPS4/SKD1 |