Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI12858 Sapria himalayana HOM05D005074 ORTHO05D006853 1.3e-182 642.9 322 100.0
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 1.2e-95 354.0 320 59.7
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 6.1e-95 351.7 309 59.2
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 8.8e-94 347.8 315 58.7
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 1.1e-93 347.4 320 56.9
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 1.5e-93 347.1 308 60.1
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 2.0e-93 346.7 319 58.0
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 2.6e-93 346.3 311 59.8
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 3.3e-93 345.9 309 58.3
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 4.4e-93 345.5 320 56.6
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 4.4e-93 345.5 317 59.0
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 5.7e-93 345.1 320 57.2
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 7.5e-93 344.7 319 58.0
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 9.7e-93 344.4 310 58.4
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.7e-92 343.6 312 58.7
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 6.3e-92 341.7 317 58.4
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 1.1e-91 340.9 319 58.0
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 1.1e-91 340.9 320 56.2
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 1.1e-91 340.9 309 57.6
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 2.4e-91 339.7 321 57.9
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 3.1e-91 339.3 322 57.8
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 4.1e-91 339.0 321 58.6
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 5.3e-91 338.6 296 60.5
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 5.3e-91 338.6 319 56.7
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 7.0e-91 338.2 319 55.8
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 9.1e-91 337.8 326 55.8
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 9.1e-91 337.8 296 59.8
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 9.1e-91 337.8 320 55.3
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 2.7e-90 336.3 320 55.9
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 2.7e-90 336.3 305 58.4
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 3.5e-90 335.9 305 58.7
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 3.5e-90 335.9 302 57.9
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 4.5e-90 335.5 305 58.0
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 5.9e-90 335.1 299 59.5
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 1.0e-89 334.3 301 57.8
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 1.0e-89 334.3 319 55.8
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 1.3e-89 334.0 311 56.3
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 1.7e-89 333.6 311 56.3
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 1.7e-89 333.6 319 55.5
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 2.2e-89 333.2 316 56.0
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 2.9e-89 332.8 316 55.7
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 2.9e-89 332.8 305 57.4
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 3.8e-89 332.4 327 55.0
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 5.0e-89 332.0 315 56.5
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 5.0e-89 332.0 313 57.5
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 6.5e-89 331.6 316 55.7
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 6.5e-89 331.6 320 54.7
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 1.5e-88 330.5 302 57.9
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 1.5e-88 330.5 301 58.5
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 1.5e-88 330.5 313 56.2
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 1.9e-88 330.1 311 55.6
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.5e-88 329.7 317 56.2
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 2.5e-88 329.7 320 56.6
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 2.5e-88 329.7 318 57.5
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 2.5e-88 329.7 305 57.4
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 2.5e-88 329.7 316 57.3
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 3.2e-88 329.3 322 54.7
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 3.2e-88 329.3 322 54.7
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 3.2e-88 329.3 321 54.8
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 3.2e-88 329.3 296 58.4
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 4.2e-88 328.9 322 54.7
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 1.2e-87 327.4 292 58.2
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.6e-87 327.0 325 53.8
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 1.6e-87 327.0 324 54.3
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 2.1e-87 326.6 308 56.8
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 2.7e-87 326.2 329 54.1
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 4.7e-87 325.5 325 55.4
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 8.0e-87 324.7 319 55.8
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 1.0e-86 324.3 296 57.8
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 2.3e-86 323.2 320 55.0
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 2.3e-86 323.2 322 54.0
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 4.0e-86 322.4 296 57.4
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 4.0e-86 322.4 322 54.7
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 5.2e-86 322.0 296 56.4
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 6.8e-86 321.6 325 54.5
Sc22g0002590 Simmondsia chinensis HOM05D005074 ORTHO05D006853 6.8e-86 321.6 305 55.7
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 8.8e-86 321.2 296 57.4
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 8.8e-86 321.2 296 57.8
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 1.2e-85 320.9 304 56.2
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 1.5e-85 320.5 328 52.7
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 5.7e-85 318.5 315 54.9
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 7.5e-85 318.2 325 52.6
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 1.1e-83 314.3 306 54.6
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 2.4e-83 313.2 308 54.5
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 3.1e-83 312.8 319 52.0
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 5.4e-83 312.0 308 54.2
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 8.5e-81 304.7 356 49.7
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 5.5e-80 302.0 305 53.4
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 1.0e-78 297.7 296 51.4
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 1.8e-78 297.0 296 54.4
FAN09G4669 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.5e-74 282.7 289 55.4
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 1.0e-73 281.2 320 48.8
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 4.7e-71 272.3 402 42.3
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 4.0e-70 269.2 280 51.1
FAN09G1779 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.0e-69 266.9 272 55.9
FAN09G0145 Fragaria x ananassa HOM05D005074 ORTHO05D006853 6.4e-68 261.9 295 52.2
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 1.2e-66 257.7 257 55.6
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 1.9e-64 250.4 297 48.5
Aa31LG1G22950 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.8e-63 246.5 296 47.0
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.0e-62 244.6 278 48.6
Aa31LG8G1910 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.7e-60 237.3 295 45.1
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 2.4e-59 233.4 303 45.2
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 7.3e-56 221.9 182 61.5
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 9.5e-56 221.5 316 43.4
RcHm_v2.0_Chr3g0462501 Rosa chinensis HOM05D005074 ORTHO05D006853 9.5e-56 221.5 266 50.0
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 1.2e-53 214.5 230 52.6
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 6.4e-52 208.8 276 46.4
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis HOM05D005074 ORTHO05D006853 3.2e-51 206.5 306 40.5
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 1.6e-50 204.1 315 39.4
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 3.9e-49 199.5 317 37.5
Oeu063389.1 Olea europaea HOM05D005074 ORTHO05D006853 2.5e-48 196.8 141 63.8
MD12G1172800 Malus domestica HOM05D005074 ORTHO05D006853 7.3e-48 195.3 229 50.2
MD05G1095500 Malus domestica HOM05D005074 ORTHO05D006853 2.6e-45 186.8 148 60.8
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 1.8e-38 164.1 206 46.6
Aa31sc2673G10 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.4e-38 163.7 230 40.9
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 3.2e-27 126.7 99 63.6
FAN09G0802 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.5e-26 123.2 99 63.6
Glyma.U000501 Glycine max HOM05D005074 ORTHO05D006853 3.5e-26 123.2 172 44.2
CBR_g45475 Chara braunii HOM05D005074 ORTHO05D006853 7.4e-24 115.5 135 44.4
Rhsim05G0219600 Rhododendron simsii HOM05D005074 ORTHO05D006853 2.7e-18 97.1 264 32.6
Medtr1g024155 Medicago truncatula HOM05D005074 ORTHO05D006853 2.1e-15 87.4 95 52.6


User provided reference genes

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