Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 4.4e-228 794.3 401 100.0
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 2.1e-100 370.2 411 52.1
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 4.3e-98 362.5 403 51.1
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 5.6e-98 362.1 407 52.6
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 9.6e-98 361.3 414 51.2
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 1.3e-97 360.9 402 51.0
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 1.6e-97 360.5 408 52.2
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 2.8e-97 359.8 407 53.3
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 3.6e-97 359.4 415 53.5
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 6.2e-97 358.6 404 53.0
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 1.8e-96 357.1 389 51.2
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 1.8e-96 357.1 389 51.7
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 2.4e-96 356.7 401 50.9
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 2.4e-96 356.7 385 51.7
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 2.4e-96 356.7 386 52.8
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 4.0e-96 355.9 407 52.6
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 9.0e-96 354.8 408 49.3
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 2.0e-95 353.6 404 50.5
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 3.4e-95 352.8 407 52.3
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 4.5e-95 352.4 398 52.5
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 5.8e-95 352.1 397 51.1
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 7.6e-95 351.7 408 51.2
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 1.3e-94 350.9 393 51.9
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 2.2e-94 350.1 395 51.1
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 3.8e-94 349.4 394 51.8
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 1.1e-93 347.8 368 52.4
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 1.4e-93 347.4 371 52.6
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 2.4e-93 346.7 398 52.5
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 2.4e-93 346.7 398 52.5
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 2.4e-93 346.7 395 53.2
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 3.2e-93 346.3 406 51.0
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 4.2e-93 345.9 420 50.7
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 4.2e-93 345.9 400 53.0
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 4.2e-93 345.9 413 49.4
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 7.1e-93 345.1 398 49.2
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 7.1e-93 345.1 400 51.5
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 7.1e-93 345.1 370 52.4
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 7.1e-93 345.1 397 49.4
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 9.3e-93 344.7 407 50.1
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 9.3e-93 344.7 403 46.9
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 1.6e-92 344.0 402 48.5
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 1.6e-92 344.0 413 47.9
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 2.1e-92 343.6 400 50.5
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 2.1e-92 343.6 418 48.6
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 2.7e-92 343.2 416 47.8
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 4.6e-92 342.4 399 50.4
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 6.0e-92 342.0 417 48.9
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 7.9e-92 341.7 379 52.2
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 1.3e-91 340.9 411 49.4
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 1.3e-91 340.9 388 51.3
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 1.3e-91 340.9 368 51.6
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 1.8e-91 340.5 402 47.5
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 1.8e-91 340.5 387 50.1
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 1.8e-91 340.5 409 48.7
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.3e-91 340.1 369 51.2
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 3.0e-91 339.7 370 51.1
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 3.0e-91 339.7 403 48.1
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 3.9e-91 339.3 400 49.2
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 3.9e-91 339.3 403 48.9
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 5.1e-91 339.0 409 48.4
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 5.1e-91 339.0 407 48.4
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 6.7e-91 338.6 393 49.4
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 8.7e-91 338.2 404 48.8
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 1.5e-90 337.4 371 51.8
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 1.5e-90 337.4 401 48.4
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 1.9e-90 337.0 403 47.9
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 3.3e-90 336.3 424 47.2
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 4.3e-90 335.9 371 50.4
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 5.6e-90 335.5 421 48.0
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 5.6e-90 335.5 399 49.4
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 3.6e-89 332.8 403 47.4
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 6.2e-89 332.0 396 49.7
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 8.1e-89 331.6 415 49.2
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 1.4e-88 330.9 413 47.0
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 1.4e-88 330.9 447 44.5
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 5.3e-88 328.9 417 46.8
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 1.2e-87 327.8 382 50.5
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 3.4e-87 326.2 414 47.1
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 4.5e-87 325.9 396 50.8
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 5.8e-87 325.5 416 45.7
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 9.9e-87 324.7 383 48.6
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 1.7e-86 323.9 403 48.4
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 1.7e-86 323.9 386 50.3
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 2.9e-86 323.2 396 50.0
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 1.1e-85 321.2 407 49.4
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 2.1e-84 317.0 420 46.0
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 4.6e-84 315.8 404 46.8
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 2.3e-83 313.5 409 46.5
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 1.1e-82 311.2 383 49.3
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 1.9e-82 310.5 419 43.9
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 4.3e-82 309.3 395 46.3
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 7.4e-82 308.5 425 45.6
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 4.8e-81 305.8 404 45.5
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 3.1e-80 303.1 397 45.8
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 2.6e-79 300.1 408 44.1
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 1.4e-77 294.3 289 57.8
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.9e-77 293.9 420 43.1
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 2.3e-75 287.0 420 42.9
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 6.7e-75 285.4 406 44.3
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 5.7e-74 282.3 362 47.0
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 2.4e-72 276.9 219 66.7
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 1.5e-71 274.2 429 39.4
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 1.3e-70 271.2 222 62.6
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 7.2e-69 265.4 250 57.6
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 5.9e-63 245.7 397 38.5
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 7.9e-60 235.3 398 37.4
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 1.3e-54 218.0 183 59.0
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 6.5e-54 215.7 177 56.5
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 2.0e-50 204.1 184 54.3
Cpa.g.sc5.344 Carica papaya HOM05D005206 ORTHO05D006219 7.0e-48 195.7 296 44.9
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 9.1e-48 195.3 378 37.3
MD16G1086600 Malus domestica HOM05D005206 ORTHO05D006219 3.0e-43 180.3 275 43.3
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 6.7e-43 179.1 109 77.1
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 7.0e-40 169.1 112 75.0
HPP92_017071 Vanilla planifolia HOM05D005206 ORTHO05D006219 2.0e-39 167.5 249 41.8
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 7.7e-39 165.6 104 76.0
VMungo0464G1917 Vigna mungo HOM05D005206 ORTHO05D006219 1.0e-38 165.2 290 38.3
AUR62026578 Chenopodium quinoa HOM05D005206 ORTHO05D006219 2.5e-37 160.6 313 37.1
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 9.4e-37 158.7 389 28.8
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 6.1e-36 156.0 397 31.2
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 8.8e-35 152.1 330 33.0
FvH4_6g23350 Fragaria vesca HOM05D005206 ORTHO05D006219 3.2e-29 133.7 82 73.2
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 4.2e-29 133.3 79 75.9
Cpa.g.sc5.345 Carica papaya HOM05D005206 ORTHO05D006219 2.1e-28 131.0 86 72.1
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 4.0e-27 126.7 226 34.1
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 6.8e-27 125.9 145 42.1
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 8.8e-27 125.6 145 42.1
FvH4_5g07370 Fragaria vesca HOM05D003058 ORTHO05D003464 1.7e-22 111.3 100 57.0
RcHm_v2.0_Chr3g0484611 Rosa chinensis HOM05D005206 ORTHO05D006219 6.1e-20 102.8 62 74.2
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 3.3e-13 80.5 160 30.0
MCO16G526 Micromonas commoda HOM05D005206 ORTHO05D006219 1.6e-12 78.2 190 30.0
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 4.7e-12 76.6 207 24.6
Cre17.g716101 Chlamydomonas reinhardtii HOM05D005206 ORTHO05D006219 1.4e-11 75.1 129 34.1
FvH4_6g44671 Fragaria vesca HOM05D005206 ORTHO05D006219 2.3e-06 57.8 35 77.1


User provided reference genes

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