Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI06788 Sapria himalayana HOM05D000104 ORTHO05D004363 4.8e-177 624.4 314 100.0
Dinv09442 Davidia involucrata HOM05D000104 ORTHO05D004363 4.0e-59 232.6 314 44.6
Cpa.g.sc73.36 Carica papaya HOM05D000104 ORTHO05D004363 5.3e-59 232.3 316 45.6
Manes.08G155800 Manihot esculenta HOM05D000104 ORTHO05D004363 5.3e-59 232.3 318 46.9
RcHm_v2.0_Chr5g0084181 Rosa chinensis HOM05D000104 ORTHO05D004363 1.2e-58 231.1 314 44.9
Thecc.05G236400 Theobroma cacao HOM05D000104 ORTHO05D004363 1.2e-58 231.1 314 43.6
Atru.chr2.1616 Acer truncatum HOM05D000104 ORTHO05D004363 1.5e-58 230.7 314 44.9
Duzib128G0660 Durio zibethinus HOM05D000104 ORTHO05D004363 2.0e-58 230.3 319 43.6
Sp5g08110 Schrenkiella parvula HOM05D000104 ORTHO05D004363 2.0e-58 230.3 322 41.9
Potri.013G068400 Populus trichocarpa HOM05D000104 ORTHO05D004363 3.4e-58 229.6 316 46.8
Sabra13G0059700 Salix brachista HOM05D000104 ORTHO05D004363 5.8e-58 228.8 314 46.8
Prupe.6G000100 Prunus persica HOM05D000104 ORTHO05D004363 2.2e-57 226.9 314 43.0
AT3G54280 Arabidopsis thaliana HOM05D000104 ORTHO05D004363 8.4e-57 224.9 314 41.1
Thhalv10010052m.g Eutrema salsugineum HOM05D000104 ORTHO05D004363 8.4e-57 224.9 314 41.1
Gohir.D13G165000 Gossypium hirsutum HOM05D000104 ORTHO05D004363 1.9e-56 223.8 314 44.6
Gorai.013G197700 Gossypium raimondii HOM05D000104 ORTHO05D004363 3.2e-56 223.0 314 44.6
CARHR164210 Cardamine hirsuta HOM05D000104 ORTHO05D004363 7.1e-56 221.9 288 43.8
AL5G35320 Arabidopsis lyrata HOM05D000104 ORTHO05D004363 1.2e-55 221.1 314 40.8
Haze_20464 Corylus avellana HOM05D000104 ORTHO05D004363 1.2e-55 221.1 294 43.9
Duzib177G0255 Durio zibethinus HOM05D000104 ORTHO05D004363 3.5e-55 219.5 314 42.7
BolC8t50557H Brassica oleracea HOM05D000104 ORTHO05D004363 6.0e-55 218.8 316 41.1
FvH4_3g46101 Fragaria vesca HOM05D000104 ORTHO05D004363 1.0e-54 218.0 314 43.3
BraA09t40189Z Brassica rapa HOM05D000104 ORTHO05D004363 1.3e-54 217.6 316 40.5
A09p47280 Brassica napus HOM05D000104 ORTHO05D004363 1.7e-54 217.2 316 40.8
Cfa017683 Carpinus fangiana HOM05D000104 ORTHO05D004363 1.7e-54 217.2 294 43.9
C08p29510 Brassica napus HOM05D000104 ORTHO05D004363 2.3e-54 216.9 316 40.8
FAN21G1945 Fragaria x ananassa HOM05D000104 ORTHO05D004363 3.0e-54 216.5 314 43.0
Aa31sc392G40 Aethionema arabicum HOM05D000104 ORTHO05D004363 5.1e-54 215.7 294 43.9
THA.LOC104819143 Tarenaya hassleriana HOM05D000104 ORTHO05D004363 8.7e-54 214.9 288 44.4
TWI32G0549 Tripterygium wilfordii HOM05D000104 ORTHO05D004363 8.7e-54 214.9 312 42.3
Carub.0005s2087 Capsella rubella HOM05D000104 ORTHO05D004363 1.9e-53 213.8 314 40.4
COL.COLO4_33474 Corchorus olitorius HOM05D000104 ORTHO05D004363 3.3e-53 213.0 314 43.0
Gohir.A13G159800 Gossypium hirsutum HOM05D000104 ORTHO05D004363 9.6e-53 211.5 313 42.8
Sed0011777 Sechium edule HOM05D000104 ORTHO05D004363 9.6e-53 211.5 285 46.7
CiPaw.09G169600 Carya illinoinensis HOM05D000104 ORTHO05D004363 1.3e-52 211.1 294 43.9
arahy.Tifrunner.gnm1.ann1.64GWQS Arachis hypogaea HOM05D000104 ORTHO05D004363 1.6e-52 210.7 316 42.1
MSTRG.11830 Avicennia marina HOM05D000104 ORTHO05D004363 1.6e-52 210.7 320 40.9
FAN11G0644 Fragaria x ananassa HOM05D000104 ORTHO05D004363 3.6e-52 209.5 314 42.0
MELO3C020235.2 Cucumis melo HOM05D000104 ORTHO05D004363 4.8e-52 209.1 286 46.5
Ciclev10030472m.g Citrus clementina HOM05D000104 ORTHO05D004363 6.2e-52 208.8 314 43.3
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 6.2e-52 208.8 314 41.7
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 8.1e-52 208.4 296 44.3
Sopen08g023150 Solanum pennellii HOM05D000104 ORTHO05D004363 1.4e-51 207.6 319 40.4
Lalb_Chr01g0000141 Lupinus albus HOM05D000104 ORTHO05D004363 2.4e-51 206.8 294 43.5
MD11G1000100 Malus domestica HOM05D000104 ORTHO05D004363 2.4e-51 206.8 314 40.4
Actinidia03314 Actinidia chinensis HOM05D000104 ORTHO05D004363 3.1e-51 206.5 314 42.4
Aqoxy7G00075 Aquilegia oxysepala HOM05D000104 ORTHO05D004363 3.1e-51 206.5 293 44.4
ClCG05G011380 Citrullus lanatus HOM05D000104 ORTHO05D004363 5.3e-51 205.7 285 46.7
Ca_19676_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004363 6.9e-51 205.3 322 41.0
CsaV3_3G021060 Cucumis sativus L. HOM05D000104 ORTHO05D004363 6.9e-51 205.3 290 46.2
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 9.0e-51 204.9 320 40.6
Solyc08g074500.2 Solanum lycopersicum HOM05D000104 ORTHO05D004363 1.2e-50 204.5 293 43.0
Nn3g17003 Nelumbo nucifera HOM05D000104 ORTHO05D004363 1.5e-50 204.1 317 41.6
Dinv37465 Davidia involucrata HOM05D000104 ORTHO05D004363 2.0e-50 203.8 314 39.8
PGR083G0814 Punica granatum HOM05D000104 ORTHO05D004363 2.0e-50 203.8 294 42.9
HanXRQChr03g0082351 Helianthus annuus HOM05D000104 ORTHO05D004363 2.6e-50 203.4 314 43.0
Migut.A00510 Erythranthe guttata HOM05D000104 ORTHO05D004363 4.5e-50 202.6 318 38.7
MD03G1000900 Malus domestica HOM05D000104 ORTHO05D004363 4.5e-50 202.6 314 39.8
TPR.G31923 Trifolium pratense HOM05D000104 ORTHO05D004363 4.5e-50 202.6 313 40.6
Glyma.12G002300 Glycine max HOM05D000104 ORTHO05D004363 1.3e-49 201.1 313 40.9
Psat7g148080 Pisum sativum HOM05D000104 ORTHO05D004363 1.3e-49 201.1 313 39.9
vmacro00212 Vaccinium macrocarpon HOM05D000104 ORTHO05D004363 1.3e-49 201.1 288 44.4
Eucgr.D01125 Eucalyptus grandis HOM05D000104 ORTHO05D004363 1.7e-49 200.7 298 43.6
SalBow4G3014 Salvia bowleyana HOM05D000104 ORTHO05D004363 2.9e-49 199.9 312 39.7
Phvul.011G002900 Phaseolus vulgaris HOM05D000104 ORTHO05D004363 4.9e-49 199.1 293 42.3
CANSAT35G1590 Cannabis sativa HOM05D000104 ORTHO05D004363 6.4e-49 198.7 289 43.3
Cc11_g04400 Coffea canephora HOM05D000104 ORTHO05D004363 6.4e-49 198.7 315 40.6
SGA_v2.0_scaffold27G11711 Striga asiatica HOM05D000104 ORTHO05D004363 6.4e-49 198.7 322 39.1
Lj3g0018732 Lotus japonicus HOM05D000104 ORTHO05D004363 4.2e-48 196.1 315 40.0
VMungo1127G2256 Vigna mungo HOM05D000104 ORTHO05D004363 4.2e-48 196.1 313 40.6
Glyma.09G234400 Glycine max HOM05D000104 ORTHO05D004363 9.3e-48 194.9 319 39.5
Nitab4.5_0002482g0020 Nicotiana tabacum HOM05D000104 ORTHO05D004363 1.6e-47 194.1 293 41.0
Nitab4.5_0001131g0010 Nicotiana tabacum HOM05D000104 ORTHO05D004363 2.1e-47 193.7 319 38.6
Lsat_1_v5_gn_5_59321 Lactuca sativa HOM05D000104 ORTHO05D004363 3.5e-47 193.0 317 42.6
Medtr4g035100 Medicago truncatula HOM05D000104 ORTHO05D004363 4.6e-47 192.6 322 39.4
Hund23685 Selenicereus undatus HOM05D000104 ORTHO05D004363 1.0e-46 191.4 320 38.1
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 1.3e-46 191.0 322 40.7
Sc05g0007890 Simmondsia chinensis HOM05D000104 ORTHO05D004363 1.8e-46 190.7 313 39.0
PSO832G0838 Papaver somniferum HOM05D000104 ORTHO05D004363 3.9e-46 189.5 314 39.5
ECA240G3782 Erigeron canadensis HOM05D000104 ORTHO05D004363 1.1e-45 188.0 323 40.6
GSVIVG01019359001 Vitis vinifera HOM05D000104 ORTHO05D004363 1.1e-45 188.0 312 38.8
HPP92_015726 Vanilla planifolia HOM05D000104 ORTHO05D004363 1.5e-45 187.6 314 38.9
ATR0665G650 Amborella trichopoda HOM05D000104 ORTHO05D004363 4.3e-45 186.0 316 38.0
Ah.14g089210 Amaranthus hybridus HOM05D000104 ORTHO05D004363 7.4e-45 185.3 313 37.1
unitig_92.g28135 Utricularia gibba HOM05D000104 ORTHO05D004363 1.8e-43 180.6 312 36.5
Os02g0161300 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D004363 2.0e-42 177.2 313 36.4
AUR62016963 Chenopodium quinoa HOM05D000104 ORTHO05D004363 4.5e-42 176.0 316 36.4
AUR62014777 Chenopodium quinoa HOM05D000104 ORTHO05D004363 7.6e-42 175.3 316 36.4
CSS0023365 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004363 4.9e-41 172.6 313 36.7
Zm00001eb297280 Zea mays HOM05D000104 ORTHO05D004363 3.2e-40 169.9 314 36.9
Oeu007492.1 Olea europaea HOM05D000104 ORTHO05D004363 2.7e-39 166.8 318 34.9
ATR0559G230 Amborella trichopoda HOM05D000104 ORTHO05D004363 3.0e-38 163.3 294 37.8
CsaV3_4G017750 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.2e-34 151.4 265 40.4
Peaxi162Scf00213g01724 Petunia axillaris HOM05D000104 ORTHO05D004363 5.5e-32 142.5 192 45.3
CDE06G1340 Ceratophyllum demersum HOM05D000104 ORTHO05D004363 3.6e-31 139.8 296 35.5
SEGI_24237 Sequoiadendron giganteum HOM05D000104 ORTHO05D004363 4.1e-27 126.3 321 32.4
Mapoly0038s0059 Marchantia polymorpha HOM05D000104 ORTHO05D004363 2.3e-22 110.5 318 30.5
SGA_v2.0_scaffold269G46291 Striga asiatica HOM05D000104 ORTHO05D004363 3.9e-22 109.8 174 39.7
Pp3c3_11220 Physcomitrium patens HOM05D000104 ORTHO05D004363 5.7e-21 105.9 319 31.0
AagrBONN_evm.TU.Sc2ySwM_228.1549 Anthoceros agrestis HOM05D000104 ORTHO05D004363 1.1e-19 101.7 313 29.7
unitig_93.g30711 Utricularia gibba HOM05D000104 ORTHO05D004363 1.5e-18 97.8 150 36.0
SMO223G0022 Selaginella moellendorffii HOM05D000104 ORTHO05D004363 2.2e-17 94.0 316 29.1
AagrBONN_evm.TU.Sc2ySwM_228.4035 Anthoceros agrestis HOM05D000104 ORTHO05D004363 4.4e-13 79.7 146 38.4


User provided reference genes

Program Settings