Gene: Solyc08g074500.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g074500.2
  • Transcript Identifier Solyc08g074500.2.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 56713918-56727149 : negative

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g074500.2.1
  • uniprot A0A3Q7HSL9
  • gene_id Solyc08g074500

Descriptions

  • Description SNF2-related (AHRD V3.3 *** A0A200QKM3_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1902185
ISO
PLAZA Integrative Orthologypositive regulation of shoot apical meristem development AT3G54280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003677
IBA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0017025
IEA
GOA DatabaseTBP-class protein binding
GO:0017025
IEA
InterProTBP-class protein binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0008094
IBA
GOA DatabaseATPase, acting on DNA

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR016024 Armadillo-type fold
IPR038718 SNF2-like, N-terminal domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR044078 Mot1, ATP-binding domain
IPR011989 Armadillo-like helical
IPR044972 TATA-binding protein-associated factor Mot1
IPR000330 SNF2, N-terminal
IPR022707 Mot1, central domain
Mapman id Description
12.4.8.2.2 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SSO1653-like group.chromatin remodeling factor (Mot1)
15.3.3.6.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1)