Gene: SGA_v2.0_scaffold269G46291
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold269G46291
- Transcript Identifier SGA_v2.0_scaffold269T46291
- Gene Type Coding gene
- Location scaffold269 : 440484-455924 : negative
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D004363
- #Genes/#Species 183/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product TATA-binding protein-associated factor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0017025 | IEA | InterPro | TBP-class protein binding | |
| GO:0005524 | ISO | PLAZA Homology (enrichment) | ATP binding | HOM05D000104 |
| GO:0070615 | ISO | PLAZA Homology (enrichment) | nucleosome-dependent ATPase activity | HOM05D000104 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001650 | Helicase, C-terminal |
| IPR016024 | Armadillo-type fold |
| IPR011989 | Armadillo-like helical |
| IPR044972 | TATA-binding protein-associated factor Mot1 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR022707 | Mot1, central domain |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 12.4.8.2.2 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.SSO1653-like group.chromatin remodeling factor (Mot1) |
| 15.3.3.6.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) |