Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05892 Sapria himalayana HOM05D001007 ORTHO05D050823 1.6e-39 165.6 84 100.0
arahy.Tifrunner.gnm1.ann1.MGB2DA Arachis hypogaea HOM05D001007 ORTHO05D006705 6.4e-28 127.1 84 75.0
arahy.Tifrunner.gnm1.ann1.SSF8HC Arachis hypogaea HOM05D001007 ORTHO05D006705 1.1e-27 126.3 84 75.0
TWI79G0297 Tripterygium wilfordii HOM05D001007 ORTHO05D006705 5.4e-27 124.0 84 71.4
CAN.G538.2 Capsicum annuum HOM05D001007 ORTHO05D006705 9.2e-27 123.2 84 73.8
AUR62001703 Chenopodium quinoa HOM05D001007 ORTHO05D006705 9.2e-27 123.2 84 71.4
DCAR_015645 Daucus carota HOM05D001007 ORTHO05D006705 9.2e-27 123.2 84 72.6
THA.LOC104814901 Tarenaya hassleriana HOM05D001007 ORTHO05D006705 1.2e-26 122.9 84 72.6
Ah.08g220450 Amaranthus hybridus HOM05D001007 ORTHO05D006705 3.5e-26 121.3 84 69.0
ClCG03G000980 Citrullus lanatus HOM05D001007 ORTHO05D006705 3.5e-26 121.3 84 73.8
Solyc06g005990.4 Solanum lycopersicum HOM05D001007 ORTHO05D006705 3.5e-26 121.3 84 72.6
Sopen06g001970 Solanum pennellii HOM05D001007 ORTHO05D006705 3.5e-26 121.3 84 72.6
Sed0027946 Sechium edule HOM05D001007 ORTHO05D006705 4.6e-26 120.9 84 72.6
GSVIVG01024809001 Vitis vinifera HOM05D001007 ORTHO05D006705 4.6e-26 120.9 84 71.4
FAN25G0707 Fragaria x ananassa HOM05D001007 ORTHO05D006705 6.0e-26 120.6 84 70.2
CiPaw.13G082700 Carya illinoinensis HOM05D001007 ORTHO05D006705 7.8e-26 120.2 84 70.2
VMungo0540G2128 Vigna mungo HOM05D001007 ORTHO05D006705 7.8e-26 120.2 84 70.2
Phvul.006G063900 Phaseolus vulgaris HOM05D001007 ORTHO05D006705 1.3e-25 119.4 84 70.2
Lalb_Chr20g0115061 Lupinus albus HOM05D001007 ORTHO05D006705 1.7e-25 119.0 84 69.0
TAR369G0542 Trochodendron aralioides HOM05D001007 ORTHO05D006705 1.7e-25 119.0 83 71.1
Glyma.18G067400 Glycine max HOM05D001007 ORTHO05D006705 2.3e-25 118.6 84 69.0
Manes.01G165300 Manihot esculenta HOM05D001007 ORTHO05D006705 2.3e-25 118.6 84 72.6
Oeu035015.2 Olea europaea HOM05D001007 ORTHO05D006705 2.3e-25 118.6 84 71.4
SGA_v2.0_scaffold20G09308 Striga asiatica HOM05D001007 ORTHO05D006705 2.3e-25 118.6 84 71.4
Prupe.6G062900 Prunus persica HOM05D001007 ORTHO05D006705 3.0e-25 118.2 84 69.0
Carub.0005s1318 Capsella rubella HOM05D001007 ORTHO05D006705 3.9e-25 117.9 84 67.9
Thhalv10010069m.g Eutrema salsugineum HOM05D001007 ORTHO05D006705 5.0e-25 117.5 84 70.2
Lj6g0017433 Lotus japonicus HOM05D001007 ORTHO05D006705 5.0e-25 117.5 84 67.9
Dinv28598 Davidia involucrata HOM05D001007 ORTHO05D006705 6.6e-25 117.1 84 70.2
Sp5g14780 Schrenkiella parvula HOM05D001007 ORTHO05D006705 6.6e-25 117.1 84 69.0
Cfa011634 Carpinus fangiana HOM05D001007 ORTHO05D006705 8.6e-25 116.7 84 67.9
FvH4_3g37880 Fragaria vesca HOM05D001007 ORTHO05D006705 8.6e-25 116.7 84 67.9
FAN11G3969 Fragaria x ananassa HOM05D001007 ORTHO05D006705 8.6e-25 116.7 84 67.9
Rhsim13G0073900 Rhododendron simsii HOM05D001007 ORTHO05D006705 8.6e-25 116.7 84 67.9
AT3G46960 Arabidopsis thaliana HOM05D001007 ORTHO05D006705 1.5e-24 115.9 83 68.7
COL.COLO4_19087 Corchorus olitorius HOM05D001007 ORTHO05D006705 1.5e-24 115.9 84 69.0
MELO3C020571.2 Cucumis melo HOM05D001007 ORTHO05D006705 1.5e-24 115.9 84 70.2
SalBow6G7021 Salvia bowleyana HOM05D001007 ORTHO05D006705 1.9e-24 115.5 84 70.2
CsaV3_1G035960 Cucumis sativus L. HOM05D001007 ORTHO05D006705 2.5e-24 115.2 84 69.0
Psat5g162480 Pisum sativum HOM05D001007 ORTHO05D006705 2.5e-24 115.2 84 69.0
ECA234G1277 Erigeron canadensis HOM05D001007 ORTHO05D006705 3.3e-24 114.8 84 67.9
RcHm_v2.0_Chr5g0068091 Rosa chinensis HOM05D001007 ORTHO05D006705 3.3e-24 114.8 84 67.9
HanXRQChr10g0294221 Helianthus annuus HOM05D001007 ORTHO05D006705 4.3e-24 114.4 84 69.0
QL93p2004_0004 Quercus lobata HOM05D001007 ORTHO05D006705 4.3e-24 114.4 83 69.9
Potri.009G041200 Populus trichocarpa HOM05D001007 ORTHO05D006705 5.6e-24 114.0 83 69.9
Actinidia25131 Actinidia chinensis HOM05D001007 ORTHO05D006705 7.3e-24 113.6 84 67.9
AL5G26180 Arabidopsis lyrata HOM05D001007 ORTHO05D006705 7.3e-24 113.6 83 67.5
ATR0618G385 Amborella trichopoda HOM05D001007 ORTHO05D006705 9.5e-24 113.2 84 69.0
MSTRG.18565 Avicennia marina HOM05D001007 ORTHO05D006705 9.5e-24 113.2 83 69.9
A06p20600 Brassica napus HOM05D001007 ORTHO05D006705 1.2e-23 112.8 84 67.9
C03p71130 Brassica napus HOM05D001007 ORTHO05D006705 1.2e-23 112.8 84 67.9
BolC3t19398H Brassica oleracea HOM05D001007 ORTHO05D006705 1.2e-23 112.8 84 67.9
BraA06t25139Z Brassica rapa HOM05D001007 ORTHO05D006705 1.2e-23 112.8 84 67.9
Eucgr.B02279 Eucalyptus grandis HOM05D001007 ORTHO05D006705 1.2e-23 112.8 84 67.9
Cpa.g.sc112.72 Carica papaya HOM05D001007 ORTHO05D006705 1.6e-23 112.5 84 71.4
Migut.D00864 Erythranthe guttata HOM05D001007 ORTHO05D006705 1.6e-23 112.5 84 67.9
FAN21G1509 Fragaria x ananassa HOM05D001007 ORTHO05D006705 1.6e-23 112.5 84 66.7
Gohir.A03G048400 Gossypium hirsutum HOM05D001007 ORTHO05D006705 1.6e-23 112.5 84 66.7
Lj2A1128G41 Lonicera japonica HOM05D001007 ORTHO05D006705 1.6e-23 112.5 83 68.7
Atru.chr3.4061 Acer truncatum HOM05D001007 ORTHO05D006705 2.1e-23 112.1 84 67.9
CANSAT54G2449 Cannabis sativa HOM05D001007 ORTHO05D006705 2.1e-23 112.1 84 66.7
Duzib170G0956 Durio zibethinus HOM05D001007 ORTHO05D006705 2.1e-23 112.1 84 67.9
Sc12g0000990 Simmondsia chinensis HOM05D001007 ORTHO05D006705 2.1e-23 112.1 84 66.7
Nn2g11355 Nelumbo nucifera HOM05D001007 ORTHO05D006705 2.8e-23 111.7 84 66.7
Peaxi162Scf00842g00018 Petunia axillaris HOM05D001007 ORTHO05D006705 2.8e-23 111.7 84 67.9
QL01p027375 Quercus lobata HOM05D001007 ORTHO05D006705 3.6e-23 111.3 83 68.7
MD11G1082500 Malus domestica HOM05D001007 ORTHO05D006705 4.7e-23 110.9 84 66.7
CSS0032887 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D006705 6.2e-23 110.5 84 65.5
CARHR155590 Cardamine hirsuta HOM05D001007 ORTHO05D006705 6.2e-23 110.5 83 65.1
Ca_14892_v3 Cicer arietinum L. HOM05D001007 ORTHO05D006705 6.2e-23 110.5 84 65.5
Gorai.003G125100 Gossypium raimondii HOM05D001007 ORTHO05D006705 6.2e-23 110.5 84 65.5
Sabra09G0029000 Salix brachista HOM05D001007 ORTHO05D006705 6.2e-23 110.5 83 66.3
Thecc.09G307300 Theobroma cacao HOM05D001007 ORTHO05D006705 8.1e-23 110.2 84 66.7
TPR.G39800 Trifolium pratense HOM05D001007 ORTHO05D050823 8.1e-23 110.2 84 65.5
Aqoxy1G00722 Aquilegia oxysepala HOM05D001007 ORTHO05D006705 1.4e-22 109.4 84 64.3
Ciclev10027687m.g Citrus clementina HOM05D001007 ORTHO05D006705 1.8e-22 109.0 84 66.7
Gohir.D03G118700 Gossypium hirsutum HOM05D001007 ORTHO05D006705 1.8e-22 109.0 84 64.3
Medtr3g462290 Medicago truncatula HOM05D001007 ORTHO05D006705 3.1e-22 108.2 84 64.3
Cc01_g13740 Coffea canephora HOM05D001007 ORTHO05D006705 6.8e-22 107.1 84 64.3
Hma1.2p1_0227F.1_g096160 Hydrangea macrophylla HOM05D001007 ORTHO05D006705 8.9e-22 106.7 95 62.1
Lsat_1_v5_gn_4_65500 Lactuca sativa HOM05D001007 ORTHO05D006705 8.9e-22 106.7 84 64.3
MD03G1077900 Malus domestica HOM05D001007 ORTHO05D006705 2.6e-21 105.1 83 65.1
Peaxi162Scf00216g00141 Petunia axillaris HOM05D001007 ORTHO05D006705 2.6e-21 105.1 84 63.1
Aa31LG4G15900 Aethionema arabicum HOM05D001007 ORTHO05D006705 4.4e-21 104.4 84 63.1
Zm00001eb232660 Zea mays HOM05D001007 ORTHO05D006705 9.9e-21 103.2 83 61.4
PSO384G0462 Papaver somniferum HOM05D001007 ORTHO05D006705 1.4e-19 99.4 81 61.7
PGR102G0557 Punica granatum HOM05D001007 ORTHO05D006705 3.2e-19 98.2 82 59.8
PSO339G3632 Papaver somniferum HOM05D001007 ORTHO05D006705 4.1e-19 97.8 81 61.7
EL10Ac7g16109 Beta vulgaris HOM05D001007 ORTHO05D006705 4.6e-18 94.4 145 41.4
CDE07G0187 Ceratophyllum demersum HOM05D001007 ORTHO05D006705 7.8e-18 93.6 82 54.9
Haze_24239 Corylus avellana HOM05D001007 ORTHO05D006705 6.2e-15 84.0 154 36.4
Psat2g126360 Pisum sativum HOM05D004266 ORTHO05D005151 1.1e-14 83.2 65 63.1
Mapoly0005s0056 Marchantia polymorpha HOM05D001007 ORTHO05D006705 1.4e-14 82.8 86 53.5
vmacro02999 Vaccinium macrocarpon HOM05D001007 ORTHO05D006705 4.0e-14 81.3 129 42.6
Pp3c20_11040 Physcomitrium patens HOM05D001007 ORTHO05D006705 8.9e-14 80.1 86 51.2
AagrBONN_evm.TU.Sc2ySwM_228.606 Anthoceros agrestis HOM05D001007 ORTHO05D006705 7.6e-13 77.0 85 47.1
AagrBONN_evm.TU.Sc2ySwM_228.608 Anthoceros agrestis HOM05D001007 ORTHO05D006705 7.6e-13 77.0 85 47.1
Nitab4.5_0000880g0030 Nicotiana tabacum HOM05D001007 ORTHO05D006705 1.3e-12 76.3 79 51.9
SMO364G0835 Selaginella moellendorffii HOM05D001007 ORTHO05D006705 1.7e-12 75.9 86 48.8
MBI05_g03442_MAGBIO Magnolia biondii HOM05D001007 ORTHO05D006705 3.2e-11 71.6 70 52.9
CBR_g8252 Chara braunii HOM05D001007 ORTHO05D006705 1.3e-09 66.2 86 44.2


User provided reference genes

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