Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05888 Sapria himalayana HOM05D001007 ORTHO05D006705 1.1e-115 419.9 201 100.0
Potri.009G041200 Populus trichocarpa HOM05D001007 ORTHO05D006705 1.7e-66 256.5 224 56.7
Sabra09G0029000 Salix brachista HOM05D001007 ORTHO05D006705 3.7e-66 255.4 224 56.7
Cpa.g.sc112.71 Carica papaya HOM05D001007 ORTHO05D006705 8.3e-66 254.2 228 53.9
QL01p027375 Quercus lobata HOM05D001007 ORTHO05D006705 5.5e-62 241.5 222 54.1
Atru.chr3.4061 Acer truncatum HOM05D001007 ORTHO05D006705 7.2e-62 241.1 225 53.8
Duzib170G0956 Durio zibethinus HOM05D001007 ORTHO05D006705 7.2e-62 241.1 224 54.9
Cfa011634 Carpinus fangiana HOM05D001007 ORTHO05D006705 9.5e-62 240.7 226 53.1
Haze_24239 Corylus avellana HOM05D001007 ORTHO05D006705 1.2e-61 240.4 224 53.1
FvH4_3g37880 Fragaria vesca HOM05D001007 ORTHO05D006705 2.1e-61 239.6 226 53.1
RcHm_v2.0_Chr5g0068091 Rosa chinensis HOM05D001007 ORTHO05D006705 2.8e-61 239.2 226 53.1
MD11G1082500 Malus domestica HOM05D001007 ORTHO05D006705 3.6e-61 238.8 223 53.8
Manes.01G165300 Manihot esculenta HOM05D001007 ORTHO05D006705 8.0e-61 237.7 224 53.6
COL.COLO4_19087 Corchorus olitorius HOM05D001007 ORTHO05D006705 1.0e-60 237.3 225 53.3
Gorai.003G125100 Gossypium raimondii HOM05D001007 ORTHO05D006705 1.4e-60 236.9 229 51.5
VMungo0540G2128 Vigna mungo HOM05D001007 ORTHO05D006705 2.3e-60 236.1 226 54.4
Prupe.6G062900 Prunus persica HOM05D001007 ORTHO05D006705 4.0e-60 235.3 225 52.9
MD03G1077900 Malus domestica HOM05D001007 ORTHO05D006705 5.2e-60 235.0 226 51.8
Gohir.D03G118700 Gossypium hirsutum HOM05D001007 ORTHO05D006705 6.8e-60 234.6 225 51.6
THA.LOC104814901 Tarenaya hassleriana HOM05D001007 ORTHO05D006705 5.7e-59 231.5 226 52.2
Thecc.09G307300 Theobroma cacao HOM05D001007 ORTHO05D006705 1.3e-58 230.3 224 52.7
AUR62001703 Chenopodium quinoa HOM05D001007 ORTHO05D006705 2.8e-58 229.2 227 50.7
Gohir.A03G048400 Gossypium hirsutum HOM05D001007 ORTHO05D006705 2.8e-58 229.2 225 50.7
AT3G46960 Arabidopsis thaliana HOM05D001007 ORTHO05D006705 1.4e-57 226.9 223 50.2
Eucgr.B02279 Eucalyptus grandis HOM05D001007 ORTHO05D006705 2.4e-57 226.1 229 50.2
Glyma.18G067400 Glycine max HOM05D001007 ORTHO05D006705 2.4e-57 226.1 219 52.5
CiPaw.13G082700 Carya illinoinensis HOM05D001007 ORTHO05D006705 3.1e-57 225.7 224 50.9
Ciclev10027687m.g Citrus clementina HOM05D001007 ORTHO05D006705 3.1e-57 225.7 225 50.7
Cc01_g13740 Coffea canephora HOM05D001007 ORTHO05D006705 5.4e-57 224.9 228 49.1
Sc12g0000990 Simmondsia chinensis HOM05D001007 ORTHO05D006705 7.0e-57 224.6 228 48.2
TAR369G0542 Trochodendron aralioides HOM05D001007 ORTHO05D006705 9.2e-57 224.2 217 51.2
Lalb_Chr20g0115061 Lupinus albus HOM05D001007 ORTHO05D006705 1.2e-56 223.8 225 51.6
AL5G26180 Arabidopsis lyrata HOM05D001007 ORTHO05D006705 1.6e-56 223.4 223 49.8
CSS0032887 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D006705 1.6e-56 223.4 219 49.8
CARHR155590 Cardamine hirsuta HOM05D001007 ORTHO05D006705 2.0e-56 223.0 214 50.9
Thhalv10010069m.g Eutrema salsugineum HOM05D001007 ORTHO05D006705 2.7e-56 222.6 223 50.2
Phvul.006G063900 Phaseolus vulgaris HOM05D001007 ORTHO05D006705 2.7e-56 222.6 225 51.1
EL10Ac7g16109 Beta vulgaris HOM05D001007 ORTHO05D006705 5.9e-56 221.5 229 51.1
vmacro02999 Vaccinium macrocarpon HOM05D001007 ORTHO05D006705 7.8e-56 221.1 221 50.2
GSVIVG01024808001 Vitis vinifera HOM05D001007 ORTHO05D006705 1.0e-55 220.7 222 50.9
Carub.0005s1318 Capsella rubella HOM05D001007 ORTHO05D006705 1.3e-55 220.3 226 49.1
Nn2g11355 Nelumbo nucifera HOM05D001007 ORTHO05D006705 1.3e-55 220.3 227 48.5
Aa31LG4G15900 Aethionema arabicum HOM05D001007 ORTHO05D006705 2.3e-55 219.5 226 49.1
Hma1.2p1_0227F.1_g096160 Hydrangea macrophylla HOM05D001007 ORTHO05D006705 3.8e-55 218.8 224 49.1
TWI79G0297 Tripterygium wilfordii HOM05D001007 ORTHO05D006705 5.0e-55 218.4 226 49.6
Nitab4.5_0002405g0030 Nicotiana tabacum HOM05D001007 ORTHO05D006705 1.1e-54 217.2 221 48.9
FAN11G3969 Fragaria x ananassa HOM05D001007 ORTHO05D006705 1.5e-54 216.9 228 49.6
Lj2A1128G41 Lonicera japonica HOM05D001007 ORTHO05D006705 2.5e-54 216.1 224 49.6
CANSAT54G2449 Cannabis sativa HOM05D001007 ORTHO05D006705 5.6e-54 214.9 227 49.3
Actinidia25132 Actinidia chinensis HOM05D001007 ORTHO05D006705 7.3e-54 214.5 217 50.7
FAN25G0707 Fragaria x ananassa HOM05D001007 ORTHO05D006705 7.3e-54 214.5 228 49.1
CDE07G1123 Ceratophyllum demersum HOM05D001007 ORTHO05D006705 1.2e-53 213.8 223 48.0
Peaxi162Scf00842g00018 Petunia axillaris HOM05D001007 ORTHO05D006705 2.1e-53 213.0 223 48.0
Sp5g14780 Schrenkiella parvula HOM05D001007 ORTHO05D006705 3.6e-53 212.2 224 48.2
Lsat_1_v5_gn_4_65480 Lactuca sativa HOM05D001007 ORTHO05D006705 4.7e-53 211.8 225 48.9
PSO339G3632 Papaver somniferum HOM05D001007 ORTHO05D006705 6.1e-53 211.5 224 47.8
FAN21G1509 Fragaria x ananassa HOM05D001007 ORTHO05D006705 8.0e-53 211.1 234 47.9
Aqoxy1G00722 Aquilegia oxysepala HOM05D001007 ORTHO05D006705 1.0e-52 210.7 224 47.8
Lj6g0017433 Lotus japonicus HOM05D001007 ORTHO05D006705 1.0e-52 210.7 231 47.6
Oeu035015.2 Olea europaea HOM05D001007 ORTHO05D006705 1.0e-52 210.7 221 47.5
Psat5g162480 Pisum sativum HOM05D001007 ORTHO05D006705 1.8e-52 209.9 222 49.5
SGA_v2.0_scaffold20G09308 Striga asiatica HOM05D001007 ORTHO05D006705 1.8e-52 209.9 226 47.3
Ah.08g220450 Amaranthus hybridus HOM05D001007 ORTHO05D006705 2.3e-52 209.5 224 47.8
PSO384G0462 Papaver somniferum HOM05D001007 ORTHO05D006705 2.3e-52 209.5 224 47.3
TPR.G30104 Trifolium pratense HOM05D001007 ORTHO05D006705 5.2e-52 208.4 210 50.0
PGR102G0557 Punica granatum HOM05D001007 ORTHO05D006705 1.2e-51 207.2 227 48.0
Solyc06g005990.4 Solanum lycopersicum HOM05D001007 ORTHO05D006705 2.0e-51 206.5 224 46.4
Sopen06g001970 Solanum pennellii HOM05D001007 ORTHO05D006705 2.6e-51 206.1 224 46.4
CAN.G538.2 Capsicum annuum HOM05D001007 ORTHO05D006705 3.4e-51 205.7 224 46.9
MSTRG.18565 Avicennia marina HOM05D001007 ORTHO05D006705 4.4e-51 205.3 224 47.8
MBI05_g03442_MAGBIO Magnolia biondii HOM05D001007 ORTHO05D006705 4.4e-51 205.3 229 46.7
MELO3C020571.2 Cucumis melo HOM05D001007 ORTHO05D006705 7.5e-51 204.5 229 48.5
CsaV3_1G035960 Cucumis sativus L. HOM05D001007 ORTHO05D006705 9.8e-51 204.1 229 48.5
Sed0027946 Sechium edule HOM05D001007 ORTHO05D006705 2.2e-50 203.0 225 47.6
BraA06t25139Z Brassica rapa HOM05D001007 ORTHO05D006705 2.9e-50 202.6 223 47.5
Migut.D00864 Erythranthe guttata HOM05D001007 ORTHO05D006705 3.7e-50 202.2 223 44.8
A06p20600 Brassica napus HOM05D001007 ORTHO05D006705 6.4e-50 201.4 223 47.1
DCAR_015644 Daucus carota HOM05D001007 ORTHO05D006705 8.3e-50 201.1 228 45.6
Medtr3g462290 Medicago truncatula HOM05D001007 ORTHO05D006705 8.3e-50 201.1 221 46.2
ClCG03G000980 Citrullus lanatus HOM05D001007 ORTHO05D006705 4.1e-49 198.7 227 47.1
ECA234G1277 Erigeron canadensis HOM05D001007 ORTHO05D006705 1.6e-48 196.8 226 45.1
HanXRQChr10g0294221 Helianthus annuus HOM05D001007 ORTHO05D006705 2.7e-48 196.1 233 45.5
ATR0618G385 Amborella trichopoda HOM05D001007 ORTHO05D006705 8.6e-47 191.0 236 41.9
Rhsim13G0073900 Rhododendron simsii HOM05D001007 ORTHO05D006705 1.1e-46 190.7 230 44.8
arahy.Tifrunner.gnm1.ann1.MGB2DA Arachis hypogaea HOM05D001007 ORTHO05D006705 3.3e-46 189.1 226 44.2
arahy.Tifrunner.gnm1.ann1.SSF8HC Arachis hypogaea HOM05D001007 ORTHO05D006705 5.6e-46 188.3 226 44.7
C03p71130 Brassica napus HOM05D001007 ORTHO05D006705 7.3e-46 188.0 228 45.6
BolC3t19398H Brassica oleracea HOM05D001007 ORTHO05D006705 9.5e-46 187.6 228 45.6
Ca_14897_v3 Cicer arietinum L. HOM05D001007 ORTHO05D006705 1.1e-38 164.1 226 42.0
Zm00001eb232660 Zea mays HOM05D001007 ORTHO05D006705 1.1e-36 157.5 229 37.1
Mapoly0005s0056 Marchantia polymorpha HOM05D001007 ORTHO05D006705 4.1e-33 145.6 247 35.2
Pp3c20_11040 Physcomitrium patens HOM05D001007 ORTHO05D006705 2.7e-32 142.9 234 37.6
AagrBONN_evm.TU.Sc2ySwM_228.608 Anthoceros agrestis HOM05D001007 ORTHO05D006705 1.9e-30 136.7 248 35.1
Nitab4.5_0000880g0030 Nicotiana tabacum HOM05D001007 ORTHO05D006705 4.3e-30 135.6 190 38.4
Dinv28598 Davidia involucrata HOM05D001007 ORTHO05D006705 4.4e-27 125.6 103 56.3
SMO364G0835 Selaginella moellendorffii HOM05D001007 ORTHO05D006705 1.7e-26 123.6 232 32.3
HPP92_015336 Vanilla planifolia HOM05D001007 ORTHO05D023068 2.3e-23 113.2 94 55.3
HPP92_015299 Vanilla planifolia HOM05D001007 ORTHO05D023068 6.6e-23 111.7 94 54.3
CBR_g8252 Chara braunii HOM05D001007 ORTHO05D006705 2.0e-11 73.6 248 27.4
SEGI_29030 Sequoiadendron giganteum HOM05D001007 ORTHO05D006705 2.6e-11 73.2 61 49.2
Sc23g0002050 Simmondsia chinensis HOM05D001007 ORTHO05D006705 5.1e-07 58.9 38 68.4


User provided reference genes

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