Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold93G28364 Striga asiatica HOM05D009140 ORTHO05D010636 6.9e-110 400.6 193 100.0
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 5.7e-32 141.7 179 39.7
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-30 137.1 186 38.7
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 2.3e-28 129.8 175 39.4
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 3.9e-28 129.0 183 38.8
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 4.3e-27 125.6 138 42.0
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 8.0e-26 121.3 174 35.1
SGA_v2.0_scaffold127G33968 Striga asiatica HOM05D009140 ORTHO05D000004 3.1e-25 119.4 123 43.9
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 5.8e-24 115.2 196 31.6
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 1.7e-20 103.6 190 32.6
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 4.3e-19 99.0 169 35.5
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 5.6e-19 98.6 146 33.6
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 7.3e-19 98.2 158 34.8
SGA_v2.0_scaffold61G21170 Striga asiatica HOM05D009140 ORTHO05D010215 8.1e-18 94.7 175 32.0
SGA_v2.0_scaffold3G01538 Striga asiatica HOM05D009140 ORTHO05D010636 1.1e-17 94.4 83 55.4
SGA_v2.0_scaffold54G19606 Striga asiatica HOM05D009140 ORTHO05D010215 2.6e-16 89.7 125 35.2
SGA_v2.0_scaffold26G11238 Striga asiatica HOM05D008147 ORTHO05D010215 6.4e-15 85.1 122 33.6
BcaB05g25247 Brassica carinata HOM05D000003 ORTHO05D000411 5.4e-14 82.0 200 23.5
SGA_v2.0_scaffold127G33986 Striga asiatica HOM05D009140 ORTHO05D000004 9.2e-14 81.3 119 37.0
SGA_v2.0_scaffold178G39506 Striga asiatica HOM05D009140 ORTHO05D010636 2.1e-13 80.1 89 39.3
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 2.7e-13 79.7 146 32.2
BcaB01g02064 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-13 79.3 150 27.3
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-12 77.8 179 29.1
SGA_v2.0_scaffold38G15008 Striga asiatica HOM05D000429 ORTHO05D021023 1.7e-12 77.0 97 37.1
SGA_v2.0_scaffold484G52346 Striga asiatica HOM05D000003 ORTHO05D010636 3.0e-12 76.3 132 34.1
Aa31LG2G18910 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.1e-12 75.5 186 24.2
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 5.1e-12 75.5 149 31.5
Aa31LG9G5230 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.6e-12 75.1 197 24.9
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 6.6e-12 75.1 177 29.4
BcaC09g51489 Brassica carinata HOM05D000003 ORTHO05D000411 1.9e-11 73.6 190 22.6
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 1.9e-11 73.6 141 30.5
SGA_v2.0_scaffold450G51801 Striga asiatica HOM05D011272 ORTHO05D010636 1.9e-11 73.6 99 36.4
BcaNung00070 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-11 72.8 192 23.4
BcaB04g17941 Brassica carinata HOM05D000003 ORTHO05D000004 5.6e-11 72.0 178 29.2
BolC8t47524H Brassica oleracea HOM05D000003 ORTHO05D000004 5.6e-11 72.0 184 26.1
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 7.3e-11 71.6 83 36.1
SGA_v2.0_scaffold982G53767 Striga asiatica HOM05D009140 ORTHO05D000004 7.3e-11 71.6 87 37.9
BcaC06g36253 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-11 71.2 194 25.3
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 9.5e-11 71.2 137 28.5
BraA02t07551Z Brassica rapa HOM05D000003 ORTHO05D000004 1.2e-10 70.9 188 25.5
BolC5t31874H Brassica oleracea HOM05D001350 ORTHO05D001091 2.1e-10 70.1 183 21.9
BcaC07g38152 Brassica carinata HOM05D000003 ORTHO05D000004 2.8e-10 69.7 140 26.4
CiPaw.03G196400 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.8e-10 69.7 184 27.2
CiPaw.07G085700 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.8e-10 69.7 182 26.4
SGA_v2.0_scaffold37G14870 Striga asiatica HOM05D011272 ORTHO05D010636 2.8e-10 69.7 98 36.7
SGA_v2.0_scaffold66G22256 Striga asiatica HOM05D000003 ORTHO05D000004 2.8e-10 69.7 151 28.5
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 3.6e-10 69.3 184 27.2
QL07p038559 Quercus lobata HOM05D000003 ORTHO05D000167 3.6e-10 69.3 136 30.9
BolC7t41032H Brassica oleracea HOM05D000003 ORTHO05D000004 6.2e-10 68.6 184 20.7
SGA_v2.0_scaffold80G25964 Striga asiatica HOM05D011272 ORTHO05D010636 6.2e-10 68.6 93 39.8
SGA_v2.0_scaffold214G42292 Striga asiatica HOM05D011272 ORTHO05D010636 8.1e-10 68.2 95 32.6
QL12p025805 Quercus lobata HOM05D000967 ORTHO05D000796 1.1e-09 67.8 136 27.9
SGA_v2.0_scaffold145G36011 Striga asiatica HOM05D009140 ORTHO05D010636 1.4e-09 67.4 108 31.5
BcaC06g35689 Brassica carinata HOM05D000003 ORTHO05D000004 1.8e-09 67.0 190 25.8
BolC9t55103H Brassica oleracea HOM05D001350 ORTHO05D001091 2.3e-09 66.6 145 24.8
SGA_v2.0_scaffold246G44809 Striga asiatica HOM05D000003 ORTHO05D000004 3.1e-09 66.2 166 30.7
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 4.0e-09 65.9 148 29.1
SGA_v2.0_scaffold5G03062 Striga asiatica HOM05D011272 ORTHO05D010636 5.2e-09 65.5 92 38.0
BcaB03g16821 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-09 65.1 141 29.8
Sp6g08450 Schrenkiella parvula HOM05D000003 ORTHO05D024751 6.8e-09 65.1 140 25.7
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 6.8e-09 65.1 132 26.5
SGA_v2.0_scaffold299G47717 Striga asiatica HOM05D000003 ORTHO05D000004 6.8e-09 65.1 150 25.3
SGA_v2.0_scaffold36G14413 Striga asiatica HOM05D000003 ORTHO05D011213 6.8e-09 65.1 162 29.6
BraA06t25657Z Brassica rapa HOM05D000003 ORTHO05D000004 8.9e-09 64.7 172 23.3
AUR62018969 Chenopodium quinoa HOM05D000003 ORTHO05D000004 8.9e-09 64.7 132 28.0
BcaC02g09541 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-08 63.9 148 27.7
BcaB04g16926 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-08 63.5 148 27.7
QL01p005053 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-08 63.5 147 25.2
QL09p015564 Quercus lobata HOM05D000003 ORTHO05D000004 2.0e-08 63.5 147 25.2
SGA_v2.0_scaffold208G41982 Striga asiatica HOM05D009140 ORTHO05D010636 2.0e-08 63.5 98 31.6
SGA_v2.0_scaffold283G46986 Striga asiatica HOM05D000003 ORTHO05D010636 2.0e-08 63.5 94 35.1
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 2.0e-08 63.5 146 28.1
Aa31LG11G5340 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-08 63.2 190 23.7
QL08p063982 Quercus lobata HOM05D000003 ORTHO05D000004 2.6e-08 63.2 172 23.8
SGA_v2.0_scaffold123G33386 Striga asiatica HOM05D011272 ORTHO05D010636 2.6e-08 63.2 89 33.7
SGA_v2.0_scaffold62G21450 Striga asiatica HOM05D016777 ORTHO05D012297 2.6e-08 63.2 116 33.6
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 2.6e-08 63.2 178 28.1
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 3.4e-08 62.8 133 30.1
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-08 62.8 183 26.8
SGA_v2.0_scaffold13G06590 Striga asiatica HOM05D011272 ORTHO05D010636 3.4e-08 62.8 90 36.7
CANSAT78G1434 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-08 62.4 163 28.2
BcaB03g16558 Brassica carinata HOM05D000003 ORTHO05D000006 5.8e-08 62.0 133 27.8
SGA_v2.0_scaffold240G44154 Striga asiatica HOM05D001437 ORTHO05D001297 5.8e-08 62.0 94 33.0
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 5.8e-08 62.0 145 30.3
Aa31sc387G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.6e-08 61.6 188 23.9
CANSAT80G2424 Cannabis sativa HOM05D000003 ORTHO05D000004 7.6e-08 61.6 187 27.3
QL03p020372 Quercus lobata HOM05D000003 ORTHO05D000004 7.6e-08 61.6 183 24.6
SGA_v2.0_scaffold225G43070 Striga asiatica HOM05D000003 ORTHO05D000004 7.6e-08 61.6 117 29.1
BcaB04g17886 Brassica carinata HOM05D000003 ORTHO05D000004 1.3e-07 60.8 142 25.4
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 1.3e-07 60.8 187 21.9
SGA_v2.0_scaffold65G22183 Striga asiatica HOM05D009140 ORTHO05D010215 1.3e-07 60.8 61 45.9
SGA_v2.0_scaffold830G53648 Striga asiatica HOM05D023122 ORTHO05D010636 1.3e-07 60.8 104 30.8
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 1.7e-07 60.5 164 25.0
Aa31LG9G1250 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-07 60.1 150 22.0
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 2.2e-07 60.1 175 24.0
BolC3t16094H Brassica oleracea HOM05D000003 ORTHO05D016458 2.2e-07 60.1 138 25.4
BolC3t19376H Brassica oleracea HOM05D000003 ORTHO05D000004 2.2e-07 60.1 194 20.6
QL04p065270 Quercus lobata HOM05D000003 ORTHO05D000004 2.2e-07 60.1 172 23.3
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 2.2e-07 60.1 174 27.6
Aa31sc142G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-07 59.7 151 25.8
Aa31sc18G100 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-07 59.7 143 23.1
Aa31sc51G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-07 59.7 136 24.3
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 2.9e-07 59.7 147 27.2
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 2.9e-07 59.7 147 27.2
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 2.9e-07 59.7 147 27.2
CANSAT25G2690 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-07 59.7 172 25.6
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 2.9e-07 59.7 131 30.5
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-07 59.3 183 26.8
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 3.7e-07 59.3 162 22.8
CANSAT64G1529 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-07 59.3 155 28.4
BolC9t56728H Brassica oleracea HOM05D001350 ORTHO05D001091 4.9e-07 58.9 145 23.4
PSO541G6374 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-07 58.9 139 28.8
PSO782G1558 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-07 58.9 157 28.0
FvH4_4g16971 Fragaria vesca HOM05D000003 ORTHO05D000004 6.4e-07 58.5 142 25.4
Nn4g22089 Nelumbo nucifera HOM05D000003 ORTHO05D000004 6.4e-07 58.5 160 26.2
SGA_v2.0_scaffold27G11529 Striga asiatica HOM05D000003 ORTHO05D017136 6.4e-07 58.5 80 36.2
Aa31LG6G15010 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.4e-07 58.2 198 23.2
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 8.4e-07 58.2 188 24.5
Sed0012627 Sechium edule HOM05D000003 ORTHO05D000004 8.4e-07 58.2 155 24.5
Aa31LG5G23430 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 185 24.9
CANSAT54G1575 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.8 156 26.3
PSO063G5373 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-06 57.8 105 30.5
SGA_v2.0_scaffold61G21264 Striga asiatica HOM05D017438 ORTHO05D000004 1.1e-06 57.8 131 26.0
Aa31LG2G18410 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-06 57.4 188 24.5
BraA04t16803Z Brassica rapa HOM05D000003 ORTHO05D001498 1.4e-06 57.4 193 24.4
CANSAT01G2780 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 172 24.4
QL05p018687 Quercus lobata HOM05D000106 ORTHO05D000160 1.4e-06 57.4 137 28.5
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-06 57.4 152 27.0
SGA_v2.0_scaffold231G43406 Striga asiatica HOM05D000024 ORTHO05D000006 1.4e-06 57.4 95 32.6
Atru.chr10.298 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-06 57.0 160 26.2
PSO541G3861 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 57.0 149 26.2
SGA_v2.0_scaffold117G32378 Striga asiatica HOM05D009140 ORTHO05D011213 1.9e-06 57.0 111 35.1
SGA_v2.0_scaffold11G05675 Striga asiatica HOM05D023122 ORTHO05D010636 1.9e-06 57.0 99 35.4
Atru.chr8.899 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 56.6 175 24.0
Aa31LG1G4180 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-06 56.6 187 20.3
BolC3t18634H Brassica oleracea HOM05D000003 ORTHO05D001498 2.4e-06 56.6 147 26.5
BolC5t31424H Brassica oleracea HOM05D001350 ORTHO05D001091 2.4e-06 56.6 145 24.1
CANSAT56G0533 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 56.6 172 24.4
CiPaw.13G119100 Carya illinoinensis HOM05D000003 ORTHO05D000004 2.4e-06 56.6 191 25.1
Atru.chr3.1772 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-06 56.2 147 27.2
CANSAT64G2066 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-06 56.2 130 27.7
MD07G1135800 Malus domestica HOM05D000003 ORTHO05D000004 3.2e-06 56.2 186 21.5
PSO339G4032 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-06 56.2 167 25.1
SGA_v2.0_scaffold151G36752 Striga asiatica HOM05D018498 ORTHO05D011557 3.2e-06 56.2 60 41.7
PSO170G3596 Papaver somniferum HOM05D000003 ORTHO05D000004 4.1e-06 55.8 133 26.3
SGA_v2.0_scaffold17G08016 Striga asiatica HOM05D009140 ORTHO05D010215 4.1e-06 55.8 61 39.3
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 4.1e-06 55.8 99 31.3
BcaC06g35181 Brassica carinata HOM05D000003 ORTHO05D000004 5.4e-06 55.5 153 26.1
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 5.4e-06 55.5 145 25.5
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 5.4e-06 55.5 67 34.3
SGA_v2.0_scaffold1540G53981 Striga asiatica HOM05D009140 ORTHO05D010636 5.4e-06 55.5 94 30.9
SGA_v2.0_scaffold349G49619 Striga asiatica HOM05D008147 ORTHO05D010215 5.4e-06 55.5 82 32.9
BcaC01g02801 Brassica carinata HOM05D000003 ORTHO05D000004 7.1e-06 55.1 153 26.8
BcaC04g21940 Brassica carinata HOM05D000003 ORTHO05D000004 7.1e-06 55.1 125 26.4
BcaC05g25416 Brassica carinata HOM05D000003 ORTHO05D000004 7.1e-06 55.1 153 26.1
CANSAT01G0185 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-06 55.1 135 29.6
PSO170G2618 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-06 55.1 149 26.2
Atru.chr5.2535 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-06 54.7 193 29.0
Atru.chr7.811 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-06 54.7 181 24.9
EL10Ac1g01308 Beta vulgaris HOM05D000003 ORTHO05D000167 9.2e-06 54.7 125 27.2
BcaB07g32788 Brassica carinata HOM05D000003 ORTHO05D000004 9.2e-06 54.7 139 25.9
PSO447G0103 Papaver somniferum HOM05D000003 ORTHO05D000004 9.2e-06 54.7 154 29.2
SGA_v2.0_scaffold231G43436 Striga asiatica HOM05D015799 ORTHO05D010636 9.2e-06 54.7 97 29.9
SGA_v2.0_scaffold34G13666 Striga asiatica HOM05D008147 ORTHO05D010636 9.2e-06 54.7 122 31.1


User provided reference genes

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