Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold90G27667 Striga asiatica HOM05D002708 ORTHO05D003516 3.0e-66 255.0 125 100.0
SGA_v2.0_scaffold85G26804 Striga asiatica HOM05D002708 ORTHO05D003516 5.7e-33 144.4 118 67.8
Migut.B01470 Erythranthe guttata HOM05D002708 ORTHO05D003516 8.3e-32 140.6 120 63.3
MSTRG.20407 Avicennia marina HOM05D002708 ORTHO05D003516 5.9e-30 134.4 120 60.8
Sc20g0000810 Simmondsia chinensis HOM05D002708 ORTHO05D003516 5.9e-30 134.4 118 59.3
Oeu002888.1 Olea europaea HOM05D002708 ORTHO05D003516 1.3e-29 133.3 121 60.3
Cpa.g.sc17.146 Carica papaya HOM05D002708 ORTHO05D003516 1.7e-29 132.9 119 59.7
CAN.G1480.4 Capsicum annuum HOM05D002708 ORTHO05D003516 3.8e-29 131.7 115 58.3
SalBow5G4312 Salvia bowleyana HOM05D002708 ORTHO05D003516 3.8e-29 131.7 118 59.3
Cc00_g16980 Coffea canephora HOM05D002708 ORTHO05D003516 6.6e-29 131.0 117 60.7
PGSC0003DMG400001674 Solanum tuberosum HOM05D002708 ORTHO05D003516 1.9e-28 129.4 118 55.1
DCAR_029539 Daucus carota HOM05D002708 ORTHO05D003516 4.3e-28 128.3 119 61.3
Manes.16G132500 Manihot esculenta HOM05D002708 ORTHO05D003516 7.3e-28 127.5 116 57.8
ECA248G3827 Erigeron canadensis HOM05D002708 ORTHO05D003516 1.6e-27 126.3 118 55.9
Peaxi162Scf01124g00013 Petunia axillaris HOM05D002708 ORTHO05D003516 1.6e-27 126.3 120 55.8
TAR375G0649 Trochodendron aralioides HOM05D002708 ORTHO05D016265 1.6e-27 126.3 120 54.2
Lsat_1_v5_gn_1_83221 Lactuca sativa HOM05D002708 ORTHO05D003516 2.1e-27 125.9 118 56.8
Nitab4.5_0001476g0150 Nicotiana tabacum HOM05D002708 ORTHO05D003516 2.1e-27 125.9 120 55.8
Nitab4.5_0012432g0010 Nicotiana tabacum HOM05D002708 ORTHO05D003516 2.1e-27 125.9 120 55.8
Solyc01g088370.3 Solanum lycopersicum HOM05D002708 ORTHO05D003516 2.1e-27 125.9 118 55.1
Hma1.2p1_0021F.1_g014376 Hydrangea macrophylla HOM05D002708 ORTHO05D003516 2.8e-27 125.6 120 57.5
Actinidia33292 Actinidia chinensis HOM05D002708 ORTHO05D003516 3.6e-27 125.2 121 56.2
HPP92_028477 Vanilla planifolia HOM05D002708 ORTHO05D003516 4.7e-27 124.8 131 49.6
ECA248G0935 Erigeron canadensis HOM05D002708 ORTHO05D003516 6.1e-27 124.4 117 56.4
HanXRQChr11g0352181 Helianthus annuus HOM05D002708 ORTHO05D003516 6.1e-27 124.4 118 55.9
unitig_0.g1326 Utricularia gibba HOM05D002708 ORTHO05D003516 6.1e-27 124.4 118 56.8
Manes.03G006600 Manihot esculenta HOM05D002708 ORTHO05D003516 8.0e-27 124.0 118 55.1
Sopen01g035200 Solanum pennellii HOM05D002708 ORTHO05D003516 8.0e-27 124.0 118 53.4
GSVIVG01036012001 Vitis vinifera HOM05D002708 ORTHO05D003516 8.0e-27 124.0 111 57.7
HanXRQChr11g0341881 Helianthus annuus HOM05D002708 ORTHO05D003516 1.4e-26 123.2 118 55.1
Hund22205 Selenicereus undatus HOM05D002708 ORTHO05D003516 1.4e-26 123.2 120 54.2
Ciclev10007609m.g Citrus clementina HOM05D002708 ORTHO05D003516 1.8e-26 122.9 120 54.2
Lj1g0003503 Lotus japonicus HOM05D002708 ORTHO05D003516 2.3e-26 122.5 118 55.1
Lsat_1_v5_gn_7_11740 Lactuca sativa HOM05D002708 ORTHO05D003516 4.0e-26 121.7 118 54.2
Atru.chr3.3419 Acer truncatum HOM05D002708 ORTHO05D003516 6.8e-26 120.9 116 54.3
Atru.chr7.2587 Acer truncatum HOM05D002708 ORTHO05D003516 6.8e-26 120.9 116 54.3
arahy.Tifrunner.gnm1.ann1.V30RJW Arachis hypogaea HOM05D002708 ORTHO05D003516 6.8e-26 120.9 120 52.5
Ca_15806_v3 Cicer arietinum L. HOM05D002708 ORTHO05D003516 6.8e-26 120.9 118 54.2
CSS0041941 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 8.9e-26 120.6 120 54.2
Prupe.6G358600 Prunus persica HOM05D002708 ORTHO05D003516 8.9e-26 120.6 121 53.7
unitig_0.g1581 Utricularia gibba HOM05D002708 ORTHO05D003516 8.9e-26 120.6 118 55.9
Actinidia21606 Actinidia chinensis HOM05D002708 ORTHO05D003516 1.2e-25 120.2 119 52.9
arahy.Tifrunner.gnm1.ann1.9YLT9A Arachis hypogaea HOM05D002708 ORTHO05D003516 1.2e-25 120.2 120 52.5
Cfa013020 Carpinus fangiana HOM05D002708 ORTHO05D003516 1.2e-25 120.2 118 55.1
Lalb_Chr08g0244681 Lupinus albus HOM05D002708 ORTHO05D003516 1.2e-25 120.2 122 51.6
Dinv44002 Davidia involucrata HOM05D002708 ORTHO05D003516 1.5e-25 119.8 116 57.8
ClCG09G010530 Citrullus lanatus HOM05D002708 ORTHO05D003516 2.0e-25 119.4 118 54.2
FAN02G3944 Fragaria x ananassa HOM05D002708 ORTHO05D003516 2.0e-25 119.4 117 53.0
FAN09G1379 Fragaria x ananassa HOM05D002708 ORTHO05D003516 2.0e-25 119.4 117 53.0
Glyma.03G002400 Glycine max HOM05D002708 ORTHO05D003516 2.0e-25 119.4 120 51.7
Gorai.008G047600 Gossypium raimondii HOM05D002708 ORTHO05D003516 2.0e-25 119.4 123 50.4
VMungo1309G2216 Vigna mungo HOM05D002708 ORTHO05D003516 2.0e-25 119.4 118 52.5
Gohir.A12G046100 Gossypium hirsutum HOM05D002708 ORTHO05D003516 2.6e-25 119.0 123 50.4
Nn4g24628 Nelumbo nucifera HOM05D002708 ORTHO05D003516 2.6e-25 119.0 120 53.3
RcHm_v2.0_Chr3g0448281 Rosa chinensis HOM05D002708 ORTHO05D003516 2.6e-25 119.0 118 53.4
Cfa002667 Carpinus fangiana HOM05D002708 ORTHO05D003516 3.4e-25 118.6 118 54.2
Gohir.D12G045200 Gossypium hirsutum HOM05D002708 ORTHO05D003516 3.4e-25 118.6 123 50.4
Nn3g18494 Nelumbo nucifera HOM05D002708 ORTHO05D003516 3.4e-25 118.6 120 50.8
Oeu037396.1 Olea europaea HOM05D002708 ORTHO05D003516 3.4e-25 118.6 143 49.0
Cfa017363 Carpinus fangiana HOM05D002708 ORTHO05D003516 4.4e-25 118.2 118 53.4
FAN05G3540 Fragaria x ananassa HOM05D002708 ORTHO05D003516 4.4e-25 118.2 137 50.4
AUR62037481 Chenopodium quinoa HOM05D002708 ORTHO05D003516 7.5e-25 117.5 119 52.1
Duzib052G0664 Durio zibethinus HOM05D002708 ORTHO05D003516 7.5e-25 117.5 120 49.2
Eucgr.J02249 Eucalyptus grandis HOM05D002708 ORTHO05D003516 7.5e-25 117.5 118 53.4
Glyma.07G107700 Glycine max HOM05D002708 ORTHO05D003516 7.5e-25 117.5 120 51.7
Lalb_Chr23g0268061 Lupinus albus HOM05D002708 ORTHO05D003516 7.5e-25 117.5 129 49.6
MD12G1258100 Malus domestica HOM05D002708 ORTHO05D003516 7.5e-25 117.5 121 54.5
PSO017G2439 Papaver somniferum HOM05D002708 ORTHO05D003516 7.5e-25 117.5 113 51.3
PSO782G1674 Papaver somniferum HOM05D002708 ORTHO05D003516 7.5e-25 117.5 113 51.3
Phvul.009G084100 Phaseolus vulgaris HOM05D002708 ORTHO05D003516 7.5e-25 117.5 118 52.5
Gohir.A03G216900 Gossypium hirsutum HOM05D002708 ORTHO05D003516 9.8e-25 117.1 118 50.8
Gohir.D02G238500 Gossypium hirsutum HOM05D002708 ORTHO05D003516 9.8e-25 117.1 118 50.8
Gorai.005G267000 Gossypium raimondii HOM05D002708 ORTHO05D003516 9.8e-25 117.1 118 50.8
Thecc.02G010700 Theobroma cacao HOM05D002708 ORTHO05D003516 9.8e-25 117.1 118 50.8
CSS0039264 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 1.3e-24 116.7 120 51.7
COL.COLO4_17667 Corchorus olitorius HOM05D002708 ORTHO05D003516 1.3e-24 116.7 119 52.1
FvH4_6g00800 Fragaria vesca HOM05D002708 ORTHO05D003516 1.3e-24 116.7 117 53.0
FAN14G3709 Fragaria x ananassa HOM05D002708 ORTHO05D003516 1.3e-24 116.7 117 53.0
Os10g0569200 Oryza sativa ssp. japonica HOM05D002708 ORTHO05D003516 1.3e-24 116.7 108 52.8
AUR62004771 Chenopodium quinoa HOM05D002708 ORTHO05D003516 1.7e-24 116.3 119 52.1
CsaV3_7G024030 Cucumis sativus L. HOM05D002708 ORTHO05D003516 1.7e-24 116.3 119 52.9
SEGI_02227 Sequoiadendron giganteum HOM05D002708 ORTHO05D003516 1.7e-24 116.3 109 54.1
CSS0029201 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 2.2e-24 115.9 120 53.3
MBI19_g28098_MAGBIO Magnolia biondii HOM05D002708 ORTHO05D003516 2.2e-24 115.9 151 43.7
Sed0015739 Sechium edule HOM05D002708 ORTHO05D003516 2.2e-24 115.9 118 52.5
Zm00001eb024200 Zea mays HOM05D002708 ORTHO05D003516 2.2e-24 115.9 110 55.5
Medtr3g105430 Medicago truncatula HOM05D002708 ORTHO05D003516 2.9e-24 115.5 111 53.2
Phvul.009G084000 Phaseolus vulgaris HOM05D002708 ORTHO05D003516 2.9e-24 115.5 118 51.7
Potri.018G015200 Populus trichocarpa HOM05D002708 ORTHO05D003516 2.9e-24 115.5 120 50.0
SEGI_28578 Sequoiadendron giganteum HOM05D002708 ORTHO05D003516 2.9e-24 115.5 122 50.8
PSO063G5514 Papaver somniferum HOM05D002708 ORTHO05D003516 4.9e-24 114.8 113 50.4
vmacro21095 Vaccinium macrocarpon HOM05D002708 ORTHO05D003516 4.9e-24 114.8 119 50.4
Potri.006G267500 Populus trichocarpa HOM05D002708 ORTHO05D003516 6.4e-24 114.4 120 49.2
Rhsim01G0145200 Rhododendron simsii HOM05D002708 ORTHO05D003516 6.4e-24 114.4 148 43.2
Sabra06G0209700 Salix brachista HOM05D002708 ORTHO05D003516 6.4e-24 114.4 120 48.3
PGR031G2892 Punica granatum HOM05D002708 ORTHO05D003516 1.1e-23 113.6 118 51.7
CANSAT25G3904 Cannabis sativa HOM05D002708 ORTHO05D003516 1.4e-23 113.2 119 51.3
CiPaw.08G004600 Carya illinoinensis HOM05D002708 ORTHO05D003516 1.4e-23 113.2 103 57.3
MD04G1241100 Malus domestica HOM05D002708 ORTHO05D003516 1.4e-23 113.2 120 52.5
TPR.G21430 Trifolium pratense HOM05D002708 ORTHO05D003516 3.2e-23 112.1 119 52.1
THA.LOC104803605 Tarenaya hassleriana HOM05D002708 ORTHO05D003516 4.1e-23 111.7 120 50.0
TWI63G0006 Tripterygium wilfordii HOM05D002708 ORTHO05D003516 4.1e-23 111.7 121 50.4
CsaV3_7G021200 Cucumis sativus L. HOM05D002708 ORTHO05D003516 5.4e-23 111.3 116 51.7
EL10Ac4g08928 Beta vulgaris HOM05D002708 ORTHO05D003516 7.0e-23 110.9 111 52.3
CDE01G0349 Ceratophyllum demersum HOM05D002708 ORTHO05D003516 1.2e-22 110.2 108 51.9
Sabra18G0018700 Salix brachista HOM05D002708 ORTHO05D003516 1.2e-22 110.2 119 49.6
Aqoxy7G03410 Aquilegia oxysepala HOM05D002708 ORTHO05D003516 2.0e-22 109.4 113 48.7
Nitab4.5_0009957g0010 Nicotiana tabacum HOM05D002708 ORTHO05D003516 2.7e-22 109.0 104 52.9
Psat5g034880 Pisum sativum HOM05D002708 ORTHO05D003516 2.7e-22 109.0 118 49.2
QL02p018118 Quercus lobata HOM05D002708 ORTHO05D003516 2.7e-22 109.0 114 49.1
CDE12G0538 Ceratophyllum demersum HOM05D002708 ORTHO05D003516 3.5e-22 108.6 108 50.9
CARHR294550 Cardamine hirsuta HOM05D002708 ORTHO05D003516 4.6e-22 108.2 115 48.7
AT5G25780 Arabidopsis thaliana HOM05D002708 ORTHO05D003516 6.0e-22 107.8 118 47.5
TWI32G0606 Tripterygium wilfordii HOM05D002708 ORTHO05D003516 7.8e-22 107.5 121 47.1
Carub.0006s2495 Capsella rubella HOM05D002708 ORTHO05D003516 1.0e-21 107.1 105 53.3
Pp3c7_370 Physcomitrium patens HOM05D002708 ORTHO05D003516 1.0e-21 107.1 117 48.7
HanXRQChr03g0088081 Helianthus annuus HOM05D002708 ORTHO05D003516 1.3e-21 106.7 117 48.7
BcaC02g08409 Brassica carinata HOM05D002708 ORTHO05D003516 1.7e-21 106.3 122 48.4
BolC4t27001H Brassica oleracea HOM05D002708 ORTHO05D003516 1.7e-21 106.3 122 48.4
A04p19190 Brassica napus HOM05D002708 ORTHO05D003516 2.3e-21 105.9 119 48.7
COL.COLO4_30887 Corchorus olitorius HOM05D002708 ORTHO05D003516 3.0e-21 105.5 109 47.7
Thhalv10000061m.g Eutrema salsugineum HOM05D002708 ORTHO05D003516 3.0e-21 105.5 119 47.9
Pp3c11_25960 Physcomitrium patens HOM05D002708 ORTHO05D003516 3.0e-21 105.5 117 47.9
ATR0693G135 Amborella trichopoda HOM05D002708 ORTHO05D003516 3.9e-21 105.1 109 46.8
AL6G37640 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 6.6e-21 104.4 125 45.6
AT5G27640 Arabidopsis thaliana HOM05D002708 ORTHO05D003516 6.6e-21 104.4 117 47.0
AL6G39390 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 8.6e-21 104.0 117 47.0
BcaC07g40905 Brassica carinata HOM05D002708 ORTHO05D003516 1.1e-20 103.6 117 47.9
A09p56110 Brassica napus HOM05D002708 ORTHO05D003516 1.1e-20 103.6 117 47.9
C04p54590 Brassica napus HOM05D002708 ORTHO05D003516 1.1e-20 103.6 122 47.5
C08p39040 Brassica napus HOM05D002708 ORTHO05D003516 1.1e-20 103.6 117 47.9
BolC8t51477H Brassica oleracea HOM05D002708 ORTHO05D003516 1.1e-20 103.6 117 47.9
Sp4g03800 Schrenkiella parvula HOM05D002708 ORTHO05D003516 1.1e-20 103.6 119 47.1
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.9e-20 102.8 115 47.0
AagrBONN_evm.TU.Sc2ySwM_117.472 Anthoceros agrestis HOM05D002708 ORTHO05D003516 1.9e-20 102.8 118 46.6
Lj9A548G53 Lonicera japonica HOM05D002708 ORTHO05D003516 3.3e-20 102.1 103 55.3
ATR0794G148 Amborella trichopoda HOM05D002708 ORTHO05D003516 7.3e-20 100.9 109 45.0
BraA09t41006Z Brassica rapa HOM05D002708 ORTHO05D003516 1.6e-19 99.8 117 47.0
BcaB06g28016 Brassica carinata HOM05D002708 ORTHO05D003516 2.1e-19 99.4 117 47.0
Dinv43572 Davidia involucrata HOM05D002708 ORTHO05D003516 8.0e-19 97.4 103 53.4
Mapoly0108s0028 Marchantia polymorpha HOM05D002708 ORTHO05D003516 1.4e-18 96.7 112 47.3
QL08p065006 Quercus lobata HOM05D002708 ORTHO05D003516 1.8e-18 96.3 120 47.5
Glyma.04G057632 Glycine max HOM05D002708 ORTHO05D003516 4.0e-18 95.1 92 50.0
CBR_g32387 Chara braunii HOM05D002708 ORTHO05D003516 5.2e-18 94.7 113 43.4
BraA04t17520Z Brassica rapa HOM05D002708 ORTHO05D003516 2.0e-17 92.8 142 40.8
SMO270G0119 Selaginella moellendorffii HOM05D002708 ORTHO05D003516 5.8e-17 91.3 100 47.0
ClCG09G010490 Citrullus lanatus HOM05D002708 ORTHO05D003516 1.1e-15 87.0 118 44.9
CSS0024835 Camellia sinensis var. sinensis HOM05D002708 ORTHO05D003516 2.4e-15 85.9 104 49.0
TPR.G27979 Trifolium pratense HOM05D002708 ORTHO05D003516 7.0e-15 84.3 115 44.3
Thhalv10027018m.g Eutrema salsugineum HOM05D002708 ORTHO05D003516 2.1e-14 82.8 100 44.0
SGA_v2.0_scaffold578G53025 Striga asiatica HOM05D002708 ORTHO05D003516 3.5e-14 82.0 85 52.9
Sed0010327 Sechium edule HOM05D002708 ORTHO05D003516 1.0e-13 80.5 114 37.7
PRCOL_00000791 Prasinoderma coloniale HOM05D002708 ORTHO05D003516 3.0e-13 79.0 103 36.9
EL10Ac5g11414 Beta vulgaris HOM05D002708 ORTHO05D003516 5.1e-13 78.2 119 39.5
BcaNung04121 Brassica carinata HOM05D002708 ORTHO05D003516 5.1e-13 78.2 102 45.1
MCO03G077 Micromonas commoda HOM05D002708 ORTHO05D003516 5.6e-12 74.7 135 35.6
Aa31LG2G18580 Aethionema arabicum HOM05D002708 ORTHO05D003516 4.0e-10 68.6 101 38.6
Haze_20811 Corylus avellana HOM05D002708 ORTHO05D003516 5.2e-10 68.2 86 45.3
SEGI_35485 Sequoiadendron giganteum HOM05D002708 ORTHO05D003516 1.2e-09 67.0 87 47.1
Haze_08297 Corylus avellana HOM05D002708 ORTHO05D016265 1.3e-08 63.5 96 33.3
Prupe.5G046800 Prunus persica HOM05D002708 ORTHO05D016265 2.9e-08 62.4 119 31.9
MD06G1040600 Malus domestica HOM05D002708 ORTHO05D016265 3.7e-08 62.0 105 32.4
Cre03.g190100 Chlamydomonas reinhardtii HOM05D002708 ORTHO05D003516 3.2e-07 58.9 121 29.8
FvH4_5g21160 Fragaria vesca HOM05D002708 ORTHO05D016265 4.1e-07 58.5 87 37.9
FAN04G2890 Fragaria x ananassa HOM05D002708 ORTHO05D016265 4.1e-07 58.5 87 36.8
FAN18G1042 Fragaria x ananassa HOM05D002708 ORTHO05D016265 4.1e-07 58.5 87 37.9
RcHm_v2.0_Chr7g0208291 Rosa chinensis HOM05D002708 ORTHO05D016265 9.2e-07 57.4 85 35.3
SEGI_37537 Sequoiadendron giganteum HOM05D002708 ORTHO05D037597 9.2e-07 57.4 84 38.1
FAN13G0591 Fragaria x ananassa HOM05D002708 ORTHO05D016265 1.2e-06 57.0 95 34.7
Lsat_1_v5_gn_5_173760 Lactuca sativa HOM05D000298 ORTHO05D233122 2.7e-06 55.8 112 35.7


User provided reference genes

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